Petromyzon marinus (sea lamprey): 116955383
Help
Entry
116955383 CDS
T09614
Symbol
VPS52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116955383 (VPS52)
Membrane trafficking [BR:
pmrn04131
]
Protein recycling
Others
EARP complex
116955383 (VPS52)
Endosome - Golgi transport
Tethering complex
GARP complex
116955383 (VPS52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
COG6_N
Cep57_MT_bd
DUF1664
ISG65-75
Nup49_C
DUF5740
DUF4795
Motif
Other DBs
NCBI-GeneID:
116955383
NCBI-ProteinID:
XP_032832311
UniProt:
A0AAJ7XFA2
LinkDB
All DBs
Position
59:complement(5053766..5095700)
Genome browser
AA seq
709 aa
AA seq
DB search
MASGREGSGLGAADEGIHVETELELLPLGDLDLTSDECILDEVDTHIQANLEDELVKEAL
RTGMDLRHYSKHVEKELQEIENTSIRDYIKESENIASLHGQITSCDSILQRMEEMLSSFQ
TDLSSISSEIQTLQEQSVAMNVKLRNRQAVRGELSQLVDELVVPDTMITAILELPVTERD
FLEQLQELNNKINYAKEQAFRETLACQDTHDVLAKLKAKAIAKVREFILQKIYAFRKPMT
NYQMAQNTLLKFRFFSEFLLANERHVAKEVRDEYVDTMARIYYSYFKAYTGRLMKLQYEE
VADKDDLMGVEDTAKKGFFSKPSLRNPQHDVTLGNRGAVISGEQLEAPILVPHAAQKQDT
RYSFESLFRSQHYALLDNCCREFLFLCDFFMVSGASAHELFTSVMGRSLSMFMKHMDAYV
ADCYDSIAVFLCIHIILRFKAIMAKRGVPALDKYWDALLELLWPRFELILEMNIYSIRST
DPQRLGAIDTRPHYVTRRYAEFSSAIVSINQSFPNDKTIALLGQLQVEVENFILLMAAEF
SSRKEQLVFLINNYDMLLSVLLERAAEDSKEVESFQQLLNARTQEFVEEILAPPFGGMIA
FVKEAEALTEKGQLERIQLHEAHVVSLVRGFGSTWKSAIEGINQDVMRSFTNFKNGTGII
QGALTQLIQYYHRFQKVLSQPPFKNLAVRGELINIHHLMVEVKKHKPNF
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggccgcgaggggagcggcctcggcgcggctgacgagggcatccacgtggag
acggagctggagctgctaccgctgggagatttggatctgacatcggacgagtgcatcctg
gacgaagtggacactcacatccaggcgaacctggaggatgagctggtgaaggaggcgctc
cgcacgggcatggacctgaggcattactcgaagcacgtggagaaagagctgcaggagatt
gagaatacgtccatcagggactacatcaaggagagtgagaacatcgcaagcctgcacggc
cagatcacctcgtgcgactccatcctgcagcgcatggaggagatgctgtcgtcgttccag
acggacctgagcagcatcagctcggagatccagacgctgcaggagcagtcggtggccatg
aacgtgaagctgcgcaaccgccaggcggtgcgcggggagctgagccagctcgtggacgag
ctggtggtgcccgacaccatgatcacggcgatcctggagctgcctgtgacggagcgtgac
tttctggagcagctgcaggagctcaacaacaaaatcaactatgccaaggagcaggcgttc
cgtgagacgctcgcctgccaggacacgcacgacgtgctggccaagctcaaggccaaggcc
atcgccaaggtccgtgagttcatcctgcagaagatttacgccttccgcaagcccatgacc
aactaccagatggcacagaacacgctgctcaagttccggttcttctcggagttcctgctg
gcgaacgagcggcacgtggccaaggaggtgcgcgacgagtacgtggacacgatggcgcgc
atctactactcgtacttcaaggcctacaccggccgcctcatgaagctgcagtacgaggag
gtggccgacaaagacgacctcatgggcgtggaggacacggccaagaaaggcttcttctcg
aagccgtcgctgaggaacccgcaacacgacgtcacgctgggcaaccgcggcgccgtcatc
tccggcgagcagctggaggcgcccatcctggtgccgcacgccgcacagaagcaggacacc
cggtactcgtttgaaagtctgttccgtagccagcactacgcgctgctggacaactgctgc
cgcgagttcctcttcctctgcgacttcttcatggtgagcggcgcctccgcccacgagctc
ttcaccagcgtcatgggccgctccctctccatgttcatgaaacacatggatgcgtacgtg
gccgactgctacgacagcatcgccgtgttcctgtgcatccacatcatcctgcgcttcaag
gccatcatggccaagcgcggcgtgccggcgctcgacaagtactgggatgcgctgctggag
ctgctgtggccgcgcttcgagctcatcctggagatgaacatctacagcatacgcagcacc
gacccccagcggctcggagccatcgacacccggccccactacgtgacgaggaggtatgcg
gagttctcgtcggccatcgtcagcatcaaccagagcttccccaacgacaaaaccatcgcc
ctgctgggacagctgcaggtggaggtggagaacttcattcttctcatggcggccgagttc
tcgtcgcgcaaggagcagctggtgttcctcatcaacaactacgacatgctgctgtccgtg
ctgctggagcgggcggctgaggacagcaaggaggtggagagcttccagcagctgctgaac
gcacgcacgcaggagtttgtggaggagatcctggccccgccgtttggggggatgatcgcc
ttcgtgaaggaggccgaggctctcactgagaaggggcagctcgaacgcatccagctccac
gaggcgcacgtggtgtcgctggtgcgtgggttcggctcaacgtggaagtcggcgatcgag
ggcataaaccaggacgtgatgcgctccttcaccaacttcaagaacggcaccggcatcatt
cagggcgccctcacgcagctcatccagtactaccaccgcttccagaaggtgctgtcccag
ccgccgttcaagaacctggcagtgcgcggggagcttatcaacatccaccacctcatggtg
gaggtgaaaaagcacaagcccaacttctga
DBGET
integrated database retrieval system
