Petromyzon marinus (sea lamprey): 116955415 Help Entry 116955415         CDS       T09614                                  Name (RefSeq) spliceosome RNA helicase Ddx39b   KO K12812   ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] Organism pmrn  Petromyzon marinus (sea lamprey) Pathway pmrn03013   Nucleocytoplasmic transport pmrn03015   mRNA surveillance pathway pmrn03040   Spliceosome Brite KEGG Orthology (KO) [BR:pmrn00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     116955415   09122 Translation    03013 Nucleocytoplasmic transport     116955415    03015 mRNA surveillance pathway     116955415  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pmrn03019]     116955415    03041 Spliceosome [BR:pmrn03041]     116955415 Enzymes [BR:pmrn01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      116955415 Messenger RNA biogenesis [BR:pmrn03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      116955415 Spliceosome [BR:pmrn03041]  Complex C   Other components    EJC/TREX     116955415  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     116955415 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD Helicase_C ResIII CMS1 Cas3-like_C_2 AAA_19 Motif Other DBs NCBI-GeneID:  116955415 NCBI-ProteinID:  XP_032832372 UniProt:  A0AAJ7XGG2 LinkDB All DBs Position 59:complement(1286771..1303913) Genome browser AA seq 427 aa AA seqDB search MAENDVENELLDYEDDEENVVAAEATEAPVKKEVKGSYVSIHSSGFRDFLLKPELLRAIV DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPTDGQVSVLVMCH TRELAFQISKEYERFSKYMPTVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALSR NKTLNLKHVKHFILDECDKMLEQLDMRRDVQDIFRMTPHEKQVMMFSATLSKEIRPVCRK FMQDPMEVFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCM ALAQLLIEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVSELPDEIDLS SYIEQSR NT seq 1284 nt NT seq  +upstreamnt  +downstreamnt atggcagagaacgacgttgagaacgagctcttggactacgaggacgacgaggagaatgtg gtggcggccgaggcgacggaggcgcccgtcaagaaggaggtgaagggctcctacgtctcc atccacagctccggcttccgggacttcctgctcaagccggagctgctgcgggcaatcgtc gactgcggctttgagcacccgtccgaggtgcaacacgagtgcatcccccaggctattctg ggcatggacgtgctgtgccaggccaagtcgggtatgggcaagacagccgtgttcgtgctg gccaccctacagcagctggagcccaccgatggacaggtgtcggtgctggtgatgtgccac acccgtgagctcgccttccaaatcagcaaggagtacgagcgcttctccaagtacatgcct accgtgaaggtggccgtgttcttcggagggttgtccatcaagaaggacgaggaggtgctg aagaagaactgccctcacatcgtggtggggacgcctggccgcatcctggccctgtccagg aacaagaccctgaacctgaagcacgtgaagcacttcatcctggacgagtgcgacaagatg ctcgagcagctcgacatgcggagggacgtgcaggacatcttccgcatgacccctcacgag aagcaggtcatgatgttcagcgccactctgagcaaggagattcggcccgtctgtcgcaag ttcatgcaagatcctatggaggtgtttgtggacgatgagacgaagctgacgctgcacggg ctgcagcagtactacgtgaagctgaaggacaacgagaagaaccggaagctcttcgacctg ctcgacgtgctcgagtttaaccaggtggtgatctttgtaaagtcggtgcagcgctgcatg gctctggcgcagctgctgattgagcagaacttcccggcgatcgccattcaccgtggcatg gcgcaagaggagaggttgtcgcgttaccagcagttcaaggacttccagcggcgcatcctc gtggccacgaacctcttcggccgtggcatggacatcgagcgagtcaacatcgtgttcaac tacgacatgcccgaggactccgacacgtacctgcacagggtcgcccgtgccggtcggttc ggcacaaagggactggcggtgacgtttgtgtcggacgagaacgacgccaagatcctgaac gacgtgcaggatcgcttcgaggtcaacgtcagcgagcttcccgacgagatcgacctctcc tcctacattgaacagagcagatga

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