Petromyzon marinus (sea lamprey): 116955419
Help
Entry
116955419 CDS
T09614
Symbol
ABCA2
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn02010
ABC transporters
pmrn04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116955419 (ABCA2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116955419 (ABCA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmrn02000
]
116955419 (ABCA2)
Transporters [BR:
pmrn02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
116955419 (ABCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
116955419
NCBI-ProteinID:
XP_032832380
UniProt:
A0AAJ7UBV1
LinkDB
All DBs
Position
59:complement(591095..651199)
Genome browser
AA seq
2721 aa
AA seq
DB search
MGFAHQLGLLLWKNVTLKRRGPWVLACEVFIPLALFFVLLGLRQKKPTISVNEVSYYSAS
PLTSAGIVHIMQSICPDGQRDAFGFLEYRNSMVTQLLERLGEVTADTDLLSPERASLDVE
LGALRQHAAELGGQPGPLERSLNAAHNLTLSTLLRDPETFRDFLSRNLSLSDGAAAALLD
SPIDTRELYRLFLGSYPLVPKEAWDKEEGDSSRDSTNSIPAFQEQLVSKWRNLHRGLLQQ
ALQDPALASQRPALLFALAQALGLANASSSNGGGSSNGGGSSNSSNRPGGEDGGDGDSSG
ASLVRALQNVLLTPTQLFRLACATDKGEPPRPLLLRPSGAAAQGGLREVRSRLCPAGAAP
QAADGAAGAPPRRNDGGGAGGEALAAFSSLALELRQQVEPAKVVQQLDLERMNASGTRQR
LQELLEDVGRLHKLLRDIHLLSGLARLLPKGACATRRGTGATSSSQDPDGHVAGNGTTFG
TGNATTTAVPPNGTEGAPREDAVADDANGDDADDADDDAADDGGGKNHFSGFVRLWAGLQ
PILCGNKREINPEALKQGNMSSLGFTSKEQRNLGLLVHLMTSNPKVLFAPAGSQADQVIQ
KANETFAFLGNVTRYAQLWLNASQKIRAVLHGGQLHDHMGWGRQLVEELSRHPELLNLSG
SHLRQGLLDGATQPLPNASVVLKQLDVIDNAACGWARFMSKVSVDVFRGFPTEDAIVNYT
LNRAYHENVTVFASVIFQTDRHGALPPHVIYKIRQNSSFTEKTNEIRRAYWRPGPNSGGQ
YYFFYGFVWIQDMIERAIINTFVGHDVVEPGNYVQLFPYPCYTRDDFLFVIEHMMPLCMV
ISWVYSVAMMIQHIVAEKEHRLKEVMKMMGLSNAVHWVAWFITGFLQLSITVAVLTVILK
YGQVLMHSDIFIIWLFLTIYALATVMFCFLVSVLYSKARMAAACGGIMYFLSYVPYMYVA
IREEVAHDKITAFEKCIASLMSTTAFGLGAKYFALYEVAGVGIQWHTFRQSPVEGDDFNL
SLALLMLLLDSVVYGVLTWYIEAVHPGTYGLPRPWYFPLQRSYWLGSGRADAWEWSGWPW
GRGGGGGVAGGAAGLSITEDDQACAMENRHRDEARGMEKEPTHLPLVVCIERLTKVYKTG
KKLALNNLSLNLYENQIVSFLGHNGAGKTTTMSILTGLFPPTSGSARIYGHDIRSEMDAI
RKSLGMCPQHNVLFDQLTVEEHLWFYSRLKGMQAHDIRIETDKMIEDLELSNKRHSKALS
LSGGMKRKLSVAIAFVGGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTILLSTHHMD
EADLLGDRIAIISHGRLKCFGSPLFLKSTFGDGYHLTLVKQQSGAEPQGCTTDATAATSS
ASSSSSPSSSSRGKGGGSSPVAGGAGGGGGGGGGGGESPCRESRVTRFICRVVPAATLLS
DSSTELSYVLPADAVRKGCFQKLFQALEENLIDLELSSFGLSDTTLEEVFLKVSEEDLSQ
EAMDEEDARSGGGDDSAAATAGKTGARSARSPGRGARGARPAAGNDEDDDEEDDEGGTSG
TSPGSSSSVGSVRGDEFSAYTDVSGEYGPLFARAEHDDDDTASLHEPEPRATPSPELDGQ
GSYSLDESWLRLRQFHGLLVKRLHHAKRNTKGLFSQILLPAFFVCVAMTVALSVPEISDL
PPLVLTPSQYHNYTQPRGNFVPFANEERKEYRLARSPDARPQQLVSTFRLPSGLGATCVL
KSPAGPAAPAATAASGANGSSAEAAEVAAVQTANLSEAARSLAARRFESMCLDSFTQGVP
LSNFVPLPVAEPSAGPSLPPSPPPPVPFGGTAAAAAAPAATAAVTDRGGGTSGVGPTGTT
GTSSSSSGSVHEAVRCVCAPHGTGFYCPAGAGGHPPSTTVVTGDILQDVTGRNVSEYLLF
TSNQYRLHRYGAITFGNIRKSIPHSFVNKAPASIRKIAVRRAAQVYYNHKGYHSMPTYLN
VINNAILRANLPKSKGNPAAYGITLINHPMNKTSASLSLDYLLQGTDVVIAIFIIVAMSF
VPASFVVFLVAEKSTKAKHLQFVSGCDPVIYWLANYVWDMLNYLVPATFCIIILFVFDLP
AYTSPTNFPAVLALFLLYGWSITPIMYPASFWFEVPSTAYVFLIVINLFIGITATVATFM
LQLFEHDKDLKAVNEYLKTIFLIFPNYNLGHGLMDLAYNEYINEYYIKIGQADKAKSPFK
WDIITRSLVAMAVEGVVGFFITVMCQYNFLRKPRRVPVSSQPVEREDVDVSAERRRVLRG
DADCDVLKVDNLTKVYHSRKMGRILAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGD
ASVTGGEAFLNGHSVLRDQHKVQQTIGYCPQFDALFDELTAREHLELYTRLRGIPWRDEK
RVVNWALQKLGLTSYADKPAGTYSGGNKRKLSTAIALIGYPPLIFLDEPTTGMDPKARRF
LWNLILDIIKTGRSVVLTSHSMEECEALCTRLAIMVNGHFKCLGSIQHLKNRFGDGYMIT
IRTRSTLLVKEVLRFFSRSFPDAVLKERHHTKVQYQLKSETLSLAAVFTKMEQVLDVLGV
EDYSVSQTTLDNVFVNFAKKQSDNLEQQESGSGPVAPGRGAAGCLPCCPPCCPPCCPPLS
PACPPPAPAWLCRGAARSAELQALIREAPRRRRGDDEEEEEDERAGPCAGDDEQLVSGDE
DGLVSFEEDRAQLAFNTDTIC
NT seq
8166 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgctcatcagctcgggctgctgctgtggaagaatgtcaccctcaaacggcgc
ggcccgtgggtgctagcttgtgaggtcttcataccgctggcgctcttcttcgttctgctt
ggacttcggcagaagaagccaaccatctctgtcaacgaagtctcgtactactcagcctcg
cccttaacctcggcggggatcgtgcacatcatgcagtccatctgccccgatggacagagg
gatgcgttcggcttcctggagtaccgcaactccatggtgactcagctgctggagcggctg
ggcgaggtgacggccgacacggacttgctctcccctgagcgcgccagcctggacgtggag
ctcggggcgctgcggcagcacgcggcggagctgggggggcagcccggccccctggagcgc
agcctcaacgcggcccacaacctgacgctctccacactgctgagagacccggagactttc
cgtgacttcctgagccggaacctctcgctgagcgatggggcggccgccgctctgctggac
tcgccgatagacacacgagagctgtaccgcctcttcctgggctcttaccctctggtgccc
aaggaagcatgggacaaggaagagggcgactcctccagggactccaccaacagcatcccg
gccttccaggagcagctggtgtccaagtggaggaacctgcacagggggcttctgcagcag
gcgctgcaggacccggcgctggcttcgcagagaccagccctgctgttcgccctcgcacag
gcgctggggctcgccaatgccagcagcagtaacggcggcggcagcagtaacggcggcggc
agcagcaacagcagcaatcggccagggggggaggatggtggcgatggtgacagcagcggc
gcctcgctcgtgcgcgctctgcagaacgtcctgctcaccccaacgcagctcttccgcctc
gcttgcgccaccgacaaaggggaaccgccacggccgctcctgctgcggccgtctggcgcc
gcggcccagggtggcctgcgcgaggttcggtcccgcctgtgcccggcgggggcggcgccg
caggcggccgatggcgcggccggcgctcctccgcggcggaacgacggcggtggcgccggc
ggcgaggcgctggcggcgttctcgagcctggcgctggagctgaggcagcaggtggagccg
gccaaggtggtgcagcagctggacctcgagcgcatgaacgccagcggcacgcggcagcgc
ctgcaggagctgctggaggacgtggggcggctgcacaagctgctgcgggacatccatctg
ctctcggggctagctcgcctcctccccaagggcgcctgcgccaccaggcgggggaccggc
gccacctcctcctcgcaggaccccgacgggcacgtagctggcaacgggaccaccttcggc
acggggaatgcaacaacgacggcggtgccgccgaacggcacggagggagcgccgcgcgag
gatgcggtggccgacgacgccaacggcgatgacgccgacgacgccgacgacgacgcggcg
gatgacggcggcggcaagaaccacttctcgggatttgtgcggctctgggccgggctgcaa
cccatcctgtgtgggaacaagcgagagatcaacccggaagcgctgaagcaggggaacatg
agctccctgggcttcacaagcaaggagcagcgcaacctgggcttgcttgtgcacctaatg
acgagcaaccccaaggttctgtttgcgcccgccggatcgcaggccgaccaggtcatccaa
aaggcgaacgagacgtttgcgttcctggggaacgtgacgcgctacgcccagttgtggctc
aacgcctcgcagaagatccgcgcggtgctgcacgggggccagctccacgaccacatgggc
tgggggcgccagctggtggaggagttgtcgcgtcacccggagctgctgaacctgtcgggc
agccacctccgacagggcctcttggatggcgccacgcagcccctgcccaatgcctccgtc
gtgctcaagcagctggacgtcattgataacgcggcctgcgggtgggcccgcttcatgtcc
aaggtgagcgtcgatgtattccgcgggttccccacggaggacgccatcgtgaactacacg
ctcaaccgcgcctaccacgagaacgtcaccgtctttgccagtgtcattttccaaacagac
cggcacggcgctctgccgccgcacgtcatctacaagatccgtcaaaactcgagcttcacg
gagaagaccaatgagatccggcgcgcctactggaggcccggacccaactccggtgggcag
tactacttcttctatggcttcgtgtggatccaagacatgatcgagcgagcgatcatcaac
acgttcgtcgggcacgacgtggtggagcccggcaactacgtgcagctcttcccctacccc
tgctacacgcgtgatgatttcctgttcgtcatcgagcacatgatgccgctgtgcatggtc
atctcctgggtttactccgtggcaatgatgatccagcacatcgtggccgagaaggagcat
cgtctgaaagaggtgatgaagatgatgggtctgagtaatgcggtgcactgggtggcgtgg
ttcatcacgggcttcctgcagctctccatcaccgtggcagtgctcaccgtcatcctcaag
tatggccaggtgctcatgcacagcgacatcttcatcatctggctcttcctcaccatctac
gccctggccaccgtcatgttctgcttcctggtgagcgtgctgtactcgaaggcgcgcatg
gcagcagcgtgcgggggcatcatgtacttcctgagctacgtgccgtacatgtacgtcgcg
atccgtgaggaggtggcgcacgacaagatcacggccttcgagaagtgcatcgcctcgctc
atgtccaccacggcgtttggcctgggagcgaagtactttgcactgtacgaggtggcgggc
gtgggcatccagtggcacaccttccgccagtcgcccgtcgagggagacgacttcaacctc
tcgctcgccctgctcatgctgctgctggacagcgtggtatacggcgtgctcacctggtac
atcgaggccgtgcacccaggcacgtacgggctgccccggccctggtacttccccctgcag
cgctcctactggctgggcagcggccgcgccgacgcctgggagtggagcggctggccgtgg
ggacgcggcggtggcggcggcgtcgccggtggcgccgcggggctaagcatcaccgaggac
gaccaggcgtgcgccatggagaaccgccaccgcgacgaggcgcgtgggatggagaaggag
cccacgcacctgcccctcgtggtgtgcatcgagcgcctcaccaaggtctacaagacggga
aagaagctggcgctcaacaacctgtcgctcaacctctacgagaaccagatcgtctccttc
ctgggccacaacggcgccggcaagaccaccaccatgtccatcctgacggggctttttccg
cccacgtcgggctcggcgcggatctacggccacgacatccgctcggagatggacgccatc
cgcaagagcctgggcatgtgcccccagcacaacgtgctgttcgaccagctcaccgtggag
gagcacctgtggttctactcgcgcctcaagggcatgcaggcccatgacatccgcatcgag
accgacaagatgatcgaggacctggagctgagcaacaagcggcacagcaaggcgctgtcg
ctgtcaggagggatgaagcgcaagctgtcggtcgccatcgccttcgtgggcggctcgcgc
gccgtcattctggacgagcccacggccggcgtggacccgtacgcacgccgcgccatctgg
gacctcatcctcaagtacaagcagggccgcacgatcctgctgtccacgcaccacatggac
gaggcggatctgctgggggaccgcatcgccatcatctcccacgggcggctcaagtgcttc
ggctcgccgctcttcctcaagagcaccttcggcgacgggtaccacctcacgctcgtcaag
cagcagagcggcgcggagccgcaaggctgcaccaccgacgccaccgccgccacctcgtcg
gcctcttcgtcctcctccccgtcgtcgtcgtcgcgcgggaagggtggcggaagctccccg
gtggcggggggtgccggtggcggcggtggcggcggcggcggggggggcgagagcccatgc
cgggagtcgcgggtcacgcgtttcatctgccgcgtggttcccgccgcgaccctgctctcc
gactcgagcaccgagctgtcgtacgtgctgcccgccgatgccgtgcgcaagggctgcttc
cagaagcttttccaggccctggaggagaatttgattgacttggaactgagcagctttggt
ctgagcgacaccacgctggaggaggtgttcctgaaggtgtcggaagaggacctttcccag
gaggcgatggatgaagaggacgcgaggagcggcggcggcgacgactccgctgccgccacc
gccggcaaaaccggtgctcgctccgcacgctcgccgggccgtggcgcccgcggagctcgt
cctgcggcggggaacgacgaggacgacgacgaggaggacgacgagggagggacgagcggc
acgtcgcccgggtcgtcgtcgtcggtgggctcggtgcgcggggacgagtttagcgcctac
accgacgtgtctggcgagtatggcccgctgttcgcccgcgccgaacatgacgatgacgac
accgccagcctgcacgagccggagccgcgtgccacgccatctccggagctcgacggtcag
ggcagctactcgctggacgagtcgtggctgcgcctgcggcagttccacggcctgctggtc
aagcggctgcaccacgccaagcgcaataccaaggggctcttctcccagatcctgctgccc
gcgttcttcgtctgcgtcgccatgacggtggcgctgtccgtgcccgagatcagcgacctc
cccccgctggtgctgacgccgtcgcagtaccacaactacacgcagccacggggcaacttt
gtgcccttcgccaacgaggagcgcaaggagtaccgcctggctcgctcccccgacgcccgc
ccccagcagctggtgtccaccttccgcctgccctcggggctgggcgccacatgcgtcctc
aaaagccccgccggccccgcggcgccggcggcgacggcggcgtccggcgccaacggcagc
agcgcggaggcggcggaggtggcggcggttcagacggcgaacctgagcgaggcggcacgc
tcgctggcggcgcgccgcttcgagtccatgtgcctcgactcgttcacgcagggcgtgccg
ctctccaacttcgtgccgctgccggtggccgagcccagcgccggtccgtcgcttcctccg
tcgccgccgccgccggtgccgtttggcgggaccgccgcggctgccgcggctcccgcggca
accgcggcggtgaccgatcgggggggcggaacgagcggtgttggacctaccggcactacc
ggcacctcctcttcctcgtccggctcggtgcacgaggcggtgcgctgcgtgtgcgccccg
cacggcaccggcttctactgcccggccggcgccggcggacacccgcccagcaccaccgtg
gtgacgggagacattctgcaggacgtgaccgggcgcaacgtgtccgagtacctgctgttc
acctccaaccagtaccgcttgcacaggtatggcgccattaccttcggtaacatccgcaag
tccatcccacactccttcgtcaacaaggcccccgcctcgatccgcaagattgccgtgcga
cgggcagcacaggtctactacaaccacaagggctaccacagcatgcccacctacttgaac
gtcatcaacaacgccatcctgcgcgccaacctgcccaagagcaagggaaaccctgccgct
tacggaataacgctcatcaaccaccccatgaacaagaccagcgcgagcctctccctggac
tacctgctgcagggcacggacgtggtgatcgccatcttcatcatcgtggccatgtcgttc
gtgccggccagcttcgtggtcttcctggtggctgagaagtccacgaaggccaagcacctg
cagttcgtcagcggctgcgacccagtcatctactggcttgccaactacgtgtgggacatg
ctgaactacctggtgcccgccacgttctgcatcatcatcctgtttgtgttcgatctgccg
gcctacacctcgcccaccaacttcccagccgtgctcgccctcttcctgctctacggctgg
tccatcacccccatcatgtatccggcgtcgttctggttcgaggttcccagcacggcctat
gtcttcctcatcgtcatcaacctcttcatcggcatcacggccaccgtcgccaccttcatg
ctgcagctcttcgagcacgacaaggacctgaaggccgtgaacgaatacctcaagaccatc
ttcctcatcttccccaactacaacctgggccacggactcatggacctggcctacaacgag
tacatcaacgagtactacatcaagatcggtcaggccgacaaggccaagtcccctttcaag
tgggacatcatcacccgcagcctcgtcgccatggcggtggagggggtcgtgggcttcttc
atcaccgtcatgtgccagtacaacttcctgcgcaagcccaggcgcgtgcctgtgagcagc
cagcccgtggagcgggaggacgtggacgtctccgcggagaggaggcgcgtgctgaggggc
gacgccgactgcgacgtcctcaaggtggacaacctcaccaaggtgtaccactcgcgcaag
atgggccgcatcctggccgtggaccggctatgcgtgggcgtgcggcccggagagtgcttc
ggcctcctgggagtgaacggcgccggcaaaacgaccacgttcaagatgctgacaggagat
gccagcgtcacggggggggaggccttcctcaacggccacagcgtgctgcgcgaccagcat
aaggtgcagcagacaatcggctattgcccgcagttcgacgcgctcttcgacgagctgacg
gcacgcgagcaccttgagctgtacacgcgcctgcgcggcatcccctggagggacgagaag
agggtagtgaactgggccctgcagaagctgggcttgacgagctacgcggacaaaccggcc
ggcacctacagcggaggcaacaagcggaagctgtctaccgccatcgcgctcatcggatac
ccgcccctcatcttcctggatgagccgacgacgggcatggacccgaaggcacggcgcttc
ctgtggaacctcatcctggacatcatcaagacggggcgctccgtggtgctcacctcccac
agcatggaggagtgcgaggccctctgcaccaggctggccatcatggtgaacggtcacttc
aagtgtctgggcagtatccagcacctgaagaacaggttcggcgacggctacatgatcacg
atccgcacgcgctccacgctgcttgtcaaggaggtgctgcgattcttcagtcgcagcttc
cccgacgccgtgctcaaggagaggcaccacaccaaggtgcagtaccagctcaagtcagag
actctgtcgctcgccgcggtcttcaccaagatggagcaggtgctggacgtactgggcgtg
gaggactactccgtcagccagaccacgctcgacaacgtgttcgtgaacttcgccaagaag
cagagcgacaatctcgagcagcaggagagcggctcgggccccgtcgcgccgggccgcggc
gccgcaggctgcctaccctgctgccccccctgctgccccccgtgctgcccaccattgtcg
ccggcctgcccgccgccggctccggcctggctgtgccgcggtgctgcccgctcagcggag
ctgcaggcgctcatccgggaagcgccacggcggcggcgcggcgatgacgaggaggaggag
gaggatgaaagggccgggccgtgcgccggcgatgacgagcagctggtcagcggcgacgag
gacggcctcgtgagcttcgaggaggacagggctcagctcgcgttcaacacggacaccatc
tgctga
DBGET
integrated database retrieval system
