Petromyzon marinus (sea lamprey): 116955475
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Entry
116955475 CDS
T09614
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16-like isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116955475
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmrn01002
]
116955475
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116955475
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116955475
Peptidases and inhibitors [BR:
pmrn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116955475
Ubiquitin system [BR:
pmrn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116955475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
116955475
NCBI-ProteinID:
XP_032832466
UniProt:
A0AAJ7U9R7
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All DBs
Position
60:complement(7950256..8023127)
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AA seq
914 aa
AA seq
DB search
MTKKTRKNKGSVDPAKAAEDGKAGAACSHVNKALEQTAVRKSLDKGGALGVCAVCPPAPA
GSSEDPQDGDEDSPLTPVWLCLKCGHQGCGRYSEGQHALAHYCTPHSDQHCLALNLHTWS
VWCYACDDEVEIAKRRVLAQTVAMIRKLAAPVSQAKVDPLRPGSAAVAEVGGQEGAGSPS
PPLTPRGPGARPLPCAVRGLSNLGNTCFFNAVTQNLAQTPLLATALRDTASGALLTVQPP
SLGALSLTLGPAGPLSSSLLHVLSAMRGVGSGALNPSGLFGELCRRCPRFKGFQQQDSQE
LLRCLLDGVKAEDVTRIKTAILEALDKPNSKTADEATRRSVKGYGLHALRLNAVDRVFGG
ELINIITCHKCGTIVRVAEPFLDLSLPVIDNTASRPTSRKARAVEAEVEERGGREREEDE
VTGSRRRGPSPTLPPAPQSKFQEKKAKKQARQQAKSMRRQQKHQRKLFPMGAETPSGDPD
PSTTDATVASNITQEDENDVRVDNEGAAADAAATADDHDDDDDAAADDGDHDDDDAADDD
AAAADEDAAVVEAPHLADSQRTRRTVDSGRPGHEPPGVTTRSSVSAVTGQLGNLQLHDEH
GGQAGEAREEDGDDGYGEKVKREVTGRLRGAGDDVGGSDCGPAASPEDVKISVDEVTKVD
EEEEEEDEEEDEEEQVKSSSRDTRLRRRKDEALSFGSDEETRIEAVAPGGPVQTLAEPPL
VPPDPGSLLGCLLRFTAPEQLTGSNKLLCEHCSLREGRKVRVYTEGTKRILVSSLPPVLT
LHLKRFQQAGFGLQKVNRRVEFPDTLNVAPFCIDTCQAACGRAGPRGRDEEYSLYGVVEH
SGTMRGGHYTAYVKTRPERPERPERPEQPGESDGSGRQQEGAWFYVSDSHVRTASLDQVL
ACQAYLLFYERASV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaagacgaggaaaaacaagggcagtgtggaccctgccaaggccgcggaggat
ggcaaagccggcgctgcgtgctcgcacgtaaacaaggcgctggagcagacggccgtgagg
aagtctctggacaaagggggggcactgggggtttgtgccgtgtgccccccggcgcctgcc
ggtagcagcgaggacccccaggatggcgacgaagactctcccctgacgcccgtgtggctg
tgtctcaagtgcggacaccagggctgtggtcgctactcagaggggcagcacgccctggcc
cactactgcactccccactcggaccagcactgcctggcactcaacttgcacacgtggagc
gtttggtgctatgcctgcgacgacgaggtggagattgccaagcgccgagtgctcgcgcag
acggtggcgatgatccgcaagctcgccgccccggtctcccaggccaaagtggaccctctc
cgtccaggatcggcggcggtggccgaggtgggggggcaggagggggcgggcagcccctcc
cctcccctgaccccgcggggccctggggctcggcccctcccgtgcgctgtgcggggactt
agcaacctgggcaacacgtgcttcttcaacgccgtgacgcagaacctggctcagactccc
ctgctggccacggcgctgagagacacggcgagcggagctctcctcaccgtgcagcccccc
tcgctcggagctctgtctctcacgctgggccctgctgggccgctctcctccagcctgctc
cacgtcctcagcgccatgcgtggcgtggggagcggagccctcaatcccagcggcctcttc
ggtgagctgtgccgcaggtgcccgcgcttcaagggcttccagcagcaggacagccaggag
ctgctgcgctgcctgctggacggagtcaaggccgaggatgtcacgaggattaagaccgcg
atcctggaggcgctggacaagccgaactccaaaaccgcagacgaggctacgcggagatcc
gtcaaaggctacgggctgcacgccctgcggttgaacgccgtcgaccgcgtgttcggtggg
gagctcatcaacatcatcacgtgccacaagtgcgggacgattgtacgggtcgcggagccc
ttcctggacctctccctgcccgtcatcgacaacacggcgagccggccgaccagcaggaag
gcccgggccgtggaggcggaggtggaggagaggggagggcgtgaaagggaggaggacgag
gtcacggggtcacggaggaggggaccctcccccactcttcccccggccccccagagcaag
ttccaagagaagaaggcgaagaaacaggcgcggcagcaagccaagtcgatgcggcgccag
cagaagcaccagcggaagctgttccccatgggagccgagactccgagtggggatcctgac
ccctcgaccaccgacgcgaccgtcgccagcaacatcacgcaagaggacgaaaatgatgtt
cgtgtagacaacgagggtgctgctgctgatgctgctgctactgctgacgatcatgatgat
gatgatgatgctgctgctgatgatggcgatcatgatgatgatgatgctgctgatgatgat
gctgctgctgctgatgaagatgccgctgttgtggaagcgccgcacctcgcggactcgcaa
cggactcgccgcacggtcgactcggggcgtcccgggcacgagccgcctggggtcacgacc
cgatcttccgtgagcgcagtcacggggcaactcggcaacctgcagctccacgacgagcac
ggggggcaggcgggcgaggcgcgggaggaggacggcgacgatgggtacggagaaaaggtg
aagagggaggtgacggggaggctacgaggagcgggagatgacgtcggtgggagtgattgt
ggaccggcagcgtcgccggaagatgtaaagatcagcgtggatgaggtaaccaaggtggat
gaggaggaggaagaggaggatgaggaggaggatgaggaggagcaggtgaagagctcgtcg
agggacacgaggctgcggagacgcaaggacgaggcgctctcgtttggcagcgacgaggaa
acgcgcatcgaggcggtggcgccaggcggcccggtgcagacgctggcggagcctcccctc
gtcccgcccgaccccggctcgctcctcggctgcctgctgcgattcacagccccggagcaa
ctgactgggagcaacaagctcctgtgtgagcactgctcactgagagaaggcaggaaggtg
agggtgtacacagaggggaccaagcggatcctggtctcgtcactgcctcccgtgctcacc
ctgcacctcaagcgcttccagcaggctggattcgggctacagaaggtgaacagacgcgtg
gagttcccagacacgctgaatgtggcacctttctgcatcgacacctgccaggctgcgtgt
gggcgagcaggcccgcgggggagggacgaggagtactcgctctacggggtggtggagcac
agcggcacgatgcgcggaggccactacacggcctacgtcaagacgcggcccgagcggccg
gagcggccggagcggcccgagcagcctggggagagcgacggctccggccggcagcaggag
ggggcgtggttctacgtgagcgactcccacgtgcgcaccgcctccctggaccaggtgctg
gcgtgccaggcctacctgctcttctacgagcgggcgagcgtgtga
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