KEGG   Petromyzon marinus (sea lamprey): 116955659
Entry
116955659         CDS       T09614                                 
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 13
  KO
K18808  toll-like receptor 13
Organism
pmrn  Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:pmrn04054]
    116955659
Pattern recognition receptors [BR:pmrn04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   116955659
SSDB
Motif
Pfam: LRR_8 TIR TIR_2 LRR_4 LRR_9 LRR_14 LRR_5
Other DBs
NCBI-GeneID: 116955659
NCBI-ProteinID: XP_032832764
UniProt: A0AAJ7UAK5
LinkDB
Position
61:2079779..2090103
AA seq 670 aa
MEEVERGALGGLPALREVYLGANSLSTFPASAFAPPLPAPGPTATSVLIGGDSDNAVGDV
GGAGSCDLANADVSVRSGGSGVATLDLGFNSISLLHADDLRWLLELRTLNLSKNQMTEVS
SGFLRGSRRLRRLLMSANRLMSVAGIFPEDLGLLEALDLRSNYLSKLPAGNFANFTSLLL
LNVADNQIAEVEDGAFDGLAALGRLDLGGNKLGLQPLGPRAFEGLVNLTNLEFNNNYLHY
ASAGAVRSPPFAPLRSLTHLFLNSQRRDGMVNFPSNFLEGLATLQELHAGELYLSVLDAG
TFLPTPNLRYLDLGPIRCAAWSRRCCGQCRSSTSCTCARPPGRRRLPVPAQPEPPAGATR
EQQPRRRGVRRRARGAAAELGALPRLQLLDVVGNPLSCGCDNAWLSDFLLNSSRVQAPGL
CRDRSGPLLFACCSCAVALVMLTATVFRFWRWHLLYGYHLLYGYHLLAAWLGERGRPARQ
PGPIRYDAFVSYNSDDEECVTRQLLPQLEGTGMRLCLHHRDFVPGKDIVDNIMDGIYASR
RTLCVVTRSYLRSEWYSKELQVAAFRLEENQDVLVLLFLEHIPHNELSAYFRMRRTIRSR
TYITWPGAREDLFARRGRRGRTVAPAGSESACKLFWHRVVGALGPGGRGDEGCGVAEEGG
PLGAPLVHAC
NT seq 2013 nt   +upstreamnt  +downstreamnt
atggaggaggtcgagcgcggagcgctgggtgggctaccggcgctgcgcgaggtctacctg
ggcgccaacagcctctccacgttccctgcctccgcgttcgcccccccgctgcccgctccc
ggccccaccgctaccagcgtcctcatcggcggcgacagtgacaacgccgttggcgacgtc
ggcggcgccggtagctgcgacctcgcgaacgccgacgtcagtgtcaggagcggcggcagc
ggcgtcgccaccttggacctagggttcaattcgatctccttgctccacgccgatgacctc
cggtggctgctggaactgaggaccctgaacctttccaagaaccaaatgaccgaggtgtcc
tcgggcttcctgcgcggttcccgtcgcctccggcgcctgctcatgtccgccaatcggctc
atgagcgtggccggcatcttccccgaggacctgggcctcctggaggccctcgacctgcgc
agcaattatctgtccaagctgccggcgggaaacttcgctaacttcacctcgctcctgttg
ctcaacgttgccgacaaccagatcgcggaggtggaggatggcgcgttcgacggcctcgcc
gccctgggccgcctcgacctgggcggcaataagctgggcctgcagcccctgggaccgcgg
gcgttcgagggcctcgtcaaccttaccaacctggagttcaacaacaactacctgcactac
gcgtccgcgggcgccgtccgcagcccgccgttcgctcccctccgcagcctcacccacctc
ttcctcaacagccagcgcagggacggcatggtcaacttcccatccaacttcctggagggc
ctggccaccctgcaggagctccacgccggggagctctacctgtcggtgctggatgccggc
acgttcctgccaacgcccaacctgcgctacctggacttgggcccaatccgctgtgcggcg
tggagccggcgctgctgcggccagtgccgctcctcgacgagctgcacctgcgcgcgtccg
cctggacgacgtcgccttcctgtcccggctcaacctgagcctcctgcgggtgctacgcgt
gagcaacaaccgcgtcggcgaggtgtccgccgccgagctcggggcgctgccgccgagctc
ggggcgctgccgcgcctgcagctgctcgacgtcgtgggcaaccccctctcctgcggctgt
gacaacgcgtggttgagcgacttcctgctaaactcgagccgcgtgcaagcgccggggctg
tgccgcgaccgctccgggccgctgctctttgcctgctgctcgtgcgccgtcgccctcgtc
atgctcaccgccaccgtcttcaggttctggcgctggcacctgctctacgggtaccacctg
ctctacgggtaccacctgctcgccgcttggctcggggagcgcgggaggcctgcgcggcag
cccggcccgatacgttacgacgcgttcgtgtcctacaacagcgacgacgaagagtgcgtc
acgcgccagctgctaccgcagctcgagggcaccggcatgcgcctctgtctgcaccaccgc
gacttcgtgccgggcaaggacatcgtggacaacatcatggacggcatctacgcgagtcgg
cgcacgctgtgcgtcgtgacgcggagctacctgcgcagcgagtggtactccaaggagctg
caggtggcggcgttccgtctcgaggagaaccaggacgtcctcgtgctcctcttcctcgag
cacatccctcacaacgagctgtccgcctacttccgcatgcgccgcaccatccgctcgcgc
acctacatcacctggcccggcgcccgggaagacttgttcgcccggcggggccggcggggc
cgcacggtggcccccgcggggtcggagagcgcctgcaagctcttctggcaccgcgtggtc
ggcgcgctagggcccggggggcgcggggacgaggggtgcggggtcgcagaggaagggggt
ccgctgggagccccgctggtgcacgcctgctga

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