Petromyzon marinus (sea lamprey): 116955691
Help
Entry
116955691 CDS
T09614
Name
(RefSeq) protocadherin-19-like
KO
K16499
protocadherin delta 2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmrn04515
]
116955691
Cell adhesion molecules [BR:
pmrn04515
]
Cadherins
Protocadherins
116955691
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
116955691
NCBI-ProteinID:
XP_032832838
LinkDB
All DBs
Position
61:complement(915569..937207)
Genome browser
AA seq
990 aa
AA seq
DB search
MTVRGLRLVSLCLATLLCCHASHTELRLQVPEEQPPGSVLGSLAQALGLTPRELRDRGFR
LLPPPPPGHGAAASSSPRLLVRLREATGELVSLGRLDREALCPAAAAQVAPPPPPSSLSA
GAAAAAAAVGGPAAAAVAAGGGGEPAACSVALDAVLERPRRSAVRVVLDILDVNDNAPRF
EPRLRRDDDDGDDDGDGDGGGEEEEEGCARVAVSESARPGTRFALPAAHDADAGPNARLR
YALNASDAFYLRVSRGDDDDDDDGDDGGDGGDGDGGGGFPELVLRRPLDREREAEHRLRL
TATDGGSPARVGVCGVVVRVLDANDNAPAFERPHYHVEVREGAPPGTEVARVRAVDPDEG
TNGRVAYALSRHAGERARRLFSVEPLSGAVRLAAPLDRERRAVEELYVEARDMGPDGVAA
HCKVTVAVLDDNDNAPEIFVSAPNDGGGAGAAGAAGAAGAAGAAGAPSSPDVAVVTVGES
RPPGSFVAFVRVADGDAGDNGRVECFLRGAGPFALRPSFENGFALVTSDALDRERAGRHG
VTVVARDAGRPPLASSKEIVVIVADENDNAPRFGAPSYRASLSENNAANAPILAVSARDP
DDGENGRVSYSIGAGEAGGLPAAALVSVDERSGEVRALRPFDHERLQALSFEVVARDHGA
PALSATATVAVDVLDRNDNAPAVSKPRLRRGNATVYALWSTPAEAQLVRIQAVDEDPGDN
GKLAFRLLRGNDGGLFRLDGDTGELATTRDFAEGDRASHELLLEVRDHGKPSLSSLATIH
VVLTDIIPARHHRDGDDGDDGDGDGGGLFMGLPLILIVALAAVCSVLLITMVAVAVVCKR
ENKEIRTYNCRAAETTYCRKPEKNGGGGGDAGRGLPSSSEPGGNGAPPPDVMLGLGARAS
LERLSRLLAETSTAAGGRGGGSQADIAREHAWMADETESLPACYPALGGAARGAMRTFRC
WDEATSAAAAAAAAGAAVARYCSPVRETRC
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgacagtccggggactccgcctcgtgtccctctgcctcgcgacgctcctctgctgccac
gccagccacacggaactacgactccaggtgccggaggagcagccgcccggctccgtgctg
ggcagcctggcccaggccctggggctgacgccacgagagcttcgcgaccgcggattccgg
ctgcttccgccgccgccgcctggccacggcgccgccgcctcctcctcgccgcgcctcctc
gttcgcctgcgcgaggccacgggcgagctcgtgtcgctgggccgcctcgaccgcgaggcc
ctctgccccgccgcggccgcccaagtcgccccgccgccgccgccgtcgtctctctccgcc
ggcgcggccgcggcggcggccgccgtcggaggtcccgccgccgccgccgtcgccgccggc
ggggggggcgagccggcggcgtgctccgtggcgctcgacgccgtgctggagaggccgcgg
cgctcggcggtgcgcgtggtgctcgacatcctggacgtgaacgacaacgcgccgcgtttc
gaacctcgcttgcggcgcgacgacgacgacggcgacgacgacggcgacggcgacggcggc
ggcgaagaagaagaagaaggctgcgcccgggtcgccgtgtccgagtcggcgcggcccggg
acgcgcttcgcgctgcccgcggcccacgacgccgacgcggggcccaacgcgcgcctgcgc
tacgccctcaacgccagcgacgccttctacctgagggtgtcccgtggcgacgacgacgac
gacgacgacggcgacgacggcggagacggcggagacggagatggcgggggagggttcccc
gagctggtgctgcgcaggccgctggaccgcgagcgggaggccgagcaccggctgcgcctc
acggccacggacggcggctccccggcgcgggtgggcgtgtgcggcgtcgtggtgcgcgtg
ctggacgccaacgacaacgcgccggccttcgagcggccgcactaccacgtcgaggtgcgg
gagggcgcgccgccgggcaccgaggtggcgcgcgtgcgagccgtcgacccggacgagggc
accaacgggcgcgtggcgtacgcgctgagccggcacgcgggcgagcgggcgcgccgcctc
ttctccgtcgagccgctctcgggcgccgtgcggctcgcggcgccgctggaccgcgagcgg
cgcgccgtcgaggagctgtacgtggaggcgcgcgacatgggccccgacggcgtggcggcg
cactgcaaggtgacggtcgccgtgctggacgacaacgacaacgcgccggagatattcgtc
tcggcgccgaacgacggcggcggagccggggcagccggggcagccggggcagccggggca
gccggggcagccggcgcgccgtcttccccggacgtcgcggtcgtcaccgtcggggagtcg
cgcccgcccggctcgttcgtggcgttcgtgcgcgtggcggacggcgacgcgggcgacaac
gggcgggtggagtgcttcctgcggggcgcggggcccttcgcgctgcggccgtccttcgag
aacggcttcgcgctcgtcacgagcgacgccctcgaccgcgagcgcgccggccgccacggc
gtgacggtggtggcgcgcgacgccgggcgcccgccgctcgcctcctccaaggagatcgtg
gtgatcgtcgccgacgagaacgacaacgcgccgcggttcggcgcgccgtcgtaccgcgcg
tccctgtcggagaacaacgcggccaacgcgccgatcctcgccgtgtcggcgcgcgacccc
gacgacggcgagaacggccgcgtgagctactcgatcggcgcgggcgaggccggcgggctg
cccgcggcggcgctggtgtcggtggacgagcggagcggcgaggtgcgcgcgctgcggccc
ttcgaccacgagaggctgcaggcgctgagcttcgaggtggtggcgcgggaccacggcgcg
ccggcgctcagcgccacggccaccgtcgccgtcgacgtgctggaccgcaacgacaacgcg
cccgccgtctccaagccgcggctccggcgcggcaacgccacggtgtacgcgctgtggagc
acgcccgccgaggcgcagctcgtcaggatccaggccgtcgacgaggaccccggggacaac
gggaagctcgccttccgcctgctgcgcggcaacgacgggggcctcttccgcctcgacggg
gacacgggcgagctggcgacgacgcgcgacttcgcggagggcgaccgcgccagccacgag
ctgctgctggaggtgagggaccacggcaagccgtcgctgtcgtcgctggccaccatccac
gtcgtcctcaccgacatcatccccgcgcgccaccaccgggacggcgacgacggcgacgac
ggcgacggcgacggcggcggcctcttcatggggctgccgctcatcctcatcgtggcgctc
gcggccgtctgctcggtgctgctcatcaccatggtggcggtggccgtcgtgtgcaagcgc
gagaacaaggagattcgcacctacaactgccgcgccgccgagaccacgtactgccggaag
ccggagaagaacggcggcggcggcggcgacgcgggccgcggcctcccctcgtcgtccgag
ccgggcggcaacggcgccccgccgcccgacgtcatgctgggcctcggggcgagggcctcg
ctcgagcggctgtcccgcctgctggccgagacgtcgacggcggcgggcgggaggggggga
ggctcgcaggccgacatcgcgcgggagcacgcctggatggccgacgagacggagtcgctg
ccggcatgctacccggcgctcggaggggcggcccgcggggcgatgcggacgttccgctgc
tgggacgaggccacgagcgccgcggcggcggcggcggccgctggcgccgcggtggcgcgg
tactgctcgccggtgagagagacgagatgctga
DBGET
integrated database retrieval system