Petromyzon marinus (sea lamprey): 116955791
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Entry
116955791 CDS
T09614
Symbol
NUP58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116955791 (NUP58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116955791 (NUP58)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116955791 (NUP58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Nup49_C
Motif
Other DBs
NCBI-GeneID:
116955791
NCBI-ProteinID:
XP_032833008
UniProt:
A0AAJ7UAS0
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All DBs
Position
61:complement(7233596..7259785)
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AA seq
673 aa
AA seq
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MATGTSGFSFGGAASTTGFAFGATGGGGTTTAPAGFNFGGPATTGAATTSVAPTASLFGT
TGTLGLGRPAGSATLFAMPMTSSSSMGGLSQGTFTATTSAPTTGLLGASGGLSLNLGGTT
AATTAAAGGLRLGGNMFSSAVGGSLFAGTSTASTGTGLNLGGTAAGQGMLGLGGGGATMG
LGGTGLGLGGTATGLGGTATGLGGTATGLGGIGTGLGGVGSGLVGVTGTGLGGIGSGLGG
IGAGLGGMGTALGGMAAAGTNVPVSKGLGGVDFTSSSDKKDDRLSAGGGPGDSKTLKSQV
LPPEICKDVENFQKFVKDQRQVQEEIGRSSSKVMLRVQEETKALRQMLSLVAAGLQRSTL
AVDKLRAEAAQELKNVEIAVRTRETPDGLQHENTAPTEYFRRLAEQFEVQMQLYRRQIEE
MENHITSQATSAHMTPQDLSLAMQRLYETFIALAAHLQTVHETVKRQKEQYLSFRKTYHG
DDTDVFEAHRTASKRVRDGLVPGPGLTTGPAPFGSLPNAAAVAMAATLTQQQQQQQHQHL
GTAAAAAAAGFYRSQGSLGLGIAPSLGTGLSGGLASSLGGSTFGGGSGFSSGSSFNSGFS
FGAANKPSGSLSAGFAGTAGGSSTSGFSFSNPGLNPSAGLTFGVSSTPGLGLANVSQPLQ
LKKPPPGNKRGKK
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgggcaccagcggcttctcgttcggcggagccgcctccaccaccggcttcgct
tttggcgccactggcgggggtggcaccacgacggctcctgcaggcttcaacttcggaggg
ccagccaccacaggcgctgctactacctctgttgcgcccaccgcctcactctttggcacc
acgggcaccttggggctgggcaggccagcaggttctgccactttgtttgccatgccgatg
acaagcagtagctccatggggggtctttcccagggcaccttcactgccaccaccagcgct
cccacaacaggcttactgggagctagcggaggactctcattaaaccttggaggaacgaca
gctgccaccacagcggccgctggtggcttgaggctcggaggaaacatgttctcttcagcg
gtgggaggctccctatttgcagggaccagcacagcaagcactggcacaggcctgaacttg
ggaggcacagccgctggccagggaatgctcggcctcgggggcggcggtgcaaccatgggg
ctcggagggacgggcttggggctcggaggaacagcaactgggctcggaggaacagcaact
gggcttggaggaacagctacggggcttggtgggattggcacgggccttggaggagtgggc
tccgggctggtaggtgtgaccgggacaggacttggtgggatcggctctgggcttggtggg
atcggcgcgggactcgggggtatgggcacggcgcttggtggaatggctgctgccggtacc
aacgtaccggtcagcaaggggctcggaggcgtggatttcaccagctcctctgacaaaaaa
gacgacagactgtctgctggcgggggcccaggggacagcaagacactgaagtcccaggtt
ctgccacctgagatctgcaaagacgttgaaaatttccagaagttcgttaaggatcagcga
caggtgcaggaggagatcggccgcagctcctccaaggtgatgctgcgggtgcaggaggag
accaaggctctgcggcagatgctgtcgcttgtggctgctgggctccagcgcagcacgctt
gcggtcgacaagctgagagcagaggctgcccaggagctgaagaacgtggagatagcggtg
cggacgcgagagacgccagatggcttacagcacgagaacacggcgcccaccgagtatttc
cgccgtttggccgagcagttcgaggtgcagatgcagctgtacaggcggcagatcgaggaa
atggagaaccacatcacctcccaggccaccagcgcgcacatgacaccacaagacttgtcg
ttggccatgcagaggttgtacgagactttcatcgcgctcgccgcgcacttgcagaccgtt
cacgagactgtcaagaggcaaaaggagcagtacctgagcttccgcaagacgtaccacggg
gacgacacggacgtgtttgaggcccaccgcacggccagcaagcgcgtgcgcgacggcctc
gtgcctgggccgggcctcaccacgggccccgcgcccttcggcagcctccccaacgccgcc
gccgtcgccatggcagccacactcacgcagcagcagcaacagcagcagcaccagcacctg
ggcacagcggcagcggcggcagcagcaggtttctacaggtcccagggctcgctaggtctg
ggcatagctccctcgctcggtactggcctctcagggggcctcgcctcatccctgggaggc
tctacgtttggagggggctcgggtttctcctctggctcctccttcaactcgggcttcagc
tttggcgctgccaacaagccgtccggcagtctgagcgcaggctttgctggcacagcagga
gggagttccacctccgggttcagcttcagcaacccgggactcaacccatcagctgggctc
accttcggcgtctcgtccacgcctggcctgggtctggccaacgtctcccagccgctgcag
ctcaagaagccaccaccggggaacaagcgcgggaagaagtga
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