KEGG   Petromyzon marinus (sea lamprey): 116955856
Entry
116955856         CDS       T09614                                 
Name
(RefSeq) roundabout homolog 1-like
  KO
K06753  roundabout, axon guidance receptor 1
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    116955856
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:pmrn04515]
    116955856
Cell adhesion molecules [BR:pmrn04515]
 Immunoglobulin superfamily
  ROBO family
   116955856
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 fn3 V-set Ig_VEGFR-1-like_5th C2-set_2 Unc5_NetrinR_N Ig_PDGFR_d4 FN3_DSCAM-DSCAML_C
Other DBs
NCBI-GeneID: 116955856
NCBI-ProteinID: XP_032833070
LinkDB
Position
62:complement(4390339..4721350)
AA seq 1134 aa
MASLTACRVASVLLVIISSSSISSSASGVTSLGADDALPMGIFSDAAGRWEEAEGNALGG
GGGGGGGGGGGGGGGGGGAEATLPSRGDTNHSTAYSGSRLRQEDSPPRIAEHPSDLIVSR
GEPATLNCKAEGRPPPSVEWYKDGERVDTDRDDPHSHRMLLPDGSLFFLRVVHGRRGNRP
DEGTYACVARNYLGEAVSRNASLEVAVLRDDFRQSPADAVVAVGEPAVLECHPPRGHPEP
TVAWRKDGATLATRDERVTTRGGKLMISSARKSDAGKYVCVGTNMVGERESEVAELSVLE
RPSFTRRPVPLVRLLDESAEFACEARGDPLPTVRWRKDDAELPRGRHEIVEEHTLRLRRI
ASGDEGAYSCIAENIVGRAEASATLTVHAPPRFVVRPRDQVAVVGHSVSFRCETTGNPPP
AVFWRRDGGQTLLFPNQPPQPGSRYSVSQSGELSIVDVRLTDAASYSCQALSVAGSVLAK
AVLEVADGLSERPLPLILQSPSNHTALVGGSVRLVCRAVGAPPPAVHWLRGGSRTFTLDP
RVTEPDEGVVQLSDVKPEDAGPYTCVAANVHGETSAVAFVDVKEYTGLIGQGRTADLSKV
PSPPSKPEVTGVTRTSVTLTWQPSGPVPTTSYVVEAYSSQSLGGAWLTVGEGVETTTLVV
RGLRSNSVYIFLVRAANPHGLSQPSALSDPVHTQDVRPTGHSVDPPDMKSVLGDAVIRLL
NPVTISSSSAQLHWTVEKPSPLLHGFQVLYRLVGRGDEGDDEGDDEVAGAGGGGGSPWMS
EEVRGPSERAAVLSGLRKGAAYRVKVRPFHGDVRGDASAGRTLRTPEEAPGAPPQEVRLH
PFTEENNTGVLVSWQPPPEEQHNGVLTEYKVWCGGNDSRLPVIRSVDGSTLSLAIPRLLG
GVRYGLTVAAGNAAGVGPHSEPAYVLLDATSLSGPLEPGDNVSLAEQISDVVRRPAFIAG
IGTACWVVLMVFSVWLYRQRKKRAGLLGSSYASTSKVPSFTFTPSVTYQRGEGNNSTGRS
GLMHVDASHHWLADTWPTAGGGHPHHHHGDCALSCCATAGVSSDSNLTNDHLPNFSQLEV
GKDRDLGCPSSSEAARDFKPSRALNGTAGLPGGLPGAAAAGGPRSAAASAAPGP
NT seq 3405 nt   +upstreamnt  +downstreamnt
atggcatcactgactgcatgtcgcgtggcctcggtgctgttggtgatcatcagcagcagc
agcatcagcagcagcgcgtccggggtgacctcgctgggcgcggacgatgccctgccgatg
ggaattttctcagacgccgcgggacgctgggaggaagcggagggcaacgcgttggggggt
ggaggaggaggtggaggaggaggaggaggtggaggaggaggtggaggaggtggagcagag
gctacgctgccaagccgcggggataccaaccacagcacggcgtactctggctcccgcctg
cgccaggaggactccccgcctcggatcgccgagcatccctccgacctgatcgtgtcgcgg
ggcgagccggcgaccctcaactgcaaggcggaggggcgtccccctcccagcgtcgagtgg
tacaaggacggcgagcgcgtggacaccgaccgcgacgatccacactcgcaccgcatgctg
ctgcccgacggttcgctcttcttcctgcgcgtggtgcacggccgtcggggcaaccggccg
gacgaggggacgtacgcgtgcgtggcgcgcaactacctgggggaggccgtgagccggaac
gcctcgctcgaggtggccgtcctccgcgacgacttccgccagagcccggcggacgcggtg
gtggccgtgggcgagccggccgtgctcgagtgccacccgccacgcgggcacccagagccc
accgtcgcctggcgcaaggacggcgcaacgctggcgacacgtgacgagcgcgtcacgacg
cgcggcggcaagctgatgatctcgagcgcgcggaagagcgatgcgggaaagtacgtctgt
gttggtaccaacatggtgggcgagagggagagcgaggtggccgaactctccgtcctcgag
cgtccctcgttcacccgccgacccgtgccactggtgcggctgctggacgagagcgccgag
tttgcgtgcgaggcgcgaggcgaccccctgccgaccgtgcgctggcggaaggacgacgcc
gagctgcccaggggcaggcacgagatcgtggaggagcacactctgcggctgcggcggatc
gcgagtggcgacgagggggcgtactcctgcatcgcggagaacatcgtggggcgggcagag
gcctcagccacgctcaccgtgcacgctcccccgcgcttcgtggtccgacccagggaccag
gtggccgtggtgggtcacagcgtctccttccgctgcgagaccactgggaaccctccgccc
gctgtcttctggagacgcgacggcgggcagacgctgctgttcccgaaccagcccccccag
ccgggcagccgctactcggtgtcgcagagcggggagttgtccatcgtggacgtgcggctc
acggacgccgcctcctacagctgccaggcgctcagcgtggccgggagcgtcctggccaag
gccgtcctggaggtggccgatggcctaagcgaacgccccctgccactcatcctccagtcg
cccagcaaccacacggcgctggtgggcggcagcgtgcgattggtctgccgggcggtcggg
gccccgccgcccgccgtccattggctgaggggcggctcgcgaactttcaccctcgacccg
cgggtcacggagcccgacgagggcgtggtgcaattgagcgacgtcaagccggaggatgcg
gggccgtacacgtgcgtggccgccaacgtgcacggggagacgagcgccgtggccttcgtg
gacgtgaaggagtacacgggtctcattggtcagggccgcaccgctgacctcagcaaggtc
ccctctcctcccagcaagcctgaggtcacaggggtcacgcgaacctccgtcactctcacg
tggcaacccagcggccccgtgcccaccacctcctacgtcgtcgaagcctacagcagccag
tcgctgggtggcgcttggctgacggtgggcgagggggtggagaccacgaccctggtggtg
cgtggcctgcgatccaactccgtctacatattcctcgtccgagccgccaacccacacgga
ctcagccagccgagcgcactctcggatcccgtgcacacgcaagacgtccgccccacggga
cactccgtcgacccgccggacatgaagagcgttctgggggacgccgttatccgcctcctc
aaccccgtcaccatctcctcctcctccgcgcagctccactggacggttgagaagccttcg
ccgctcctccacggattccaggtgctctaccgcctcgtcggccgcggcgacgagggcgac
gacgagggcgacgacgaggtcgccggcgccggtggcggcggcgggtcgccgtggatgagc
gaggaggtgcgcgggccttccgagagggccgccgtgctatcgggcctccgcaagggggcc
gcgtaccgcgtgaaggtgcggcccttccacggtgacgtgcgcggcgatgccagcgccggg
cggacgctccggacgcccgaagaagcccccggcgcccccccacaggaagttcgtctgcat
cccttcaccgaggagaacaacaccggggtgctggtttcctggcagccacctccggaggag
cagcacaacggcgtgctgacagagtacaaggtgtggtgtgggggtaacgacagtcgtctg
cctgtgatccgctctgtggacggcagcacgttgtcgctcgccatcccgcgcctcttgggc
ggcgtgcgctacggcctcaccgtcgccgcgggcaacgcggccggagtcggaccgcacagc
gagcccgcctacgtgttgctagacgcgacgtcgctgagtggcccgctggagccgggtgac
aacgtgagcctggctgagcagatctcggacgtggtgcgccggccggcgttcatcgccggc
atcggcacggcgtgctgggtcgtgctcatggtgttcagtgtgtggctctaccggcagcgg
aagaagcgagcggggctgctcggctcgtcctacgcctccaccagcaaggttccgtctttc
acattcacgccgtcagtgacgtatcaacgcggcgaaggcaacaacagcactggcaggtcg
ggcctgatgcacgtggacgcgtctcaccactggctggccgacacgtggcccactgccggg
gggggccacccccaccaccaccacggtgactgtgccctcagctgctgtgccaccgccgga
gtcagcagcgacagcaacctcacaaacgaccacctgcccaacttctcccagctggaggtg
ggcaaggaccgggacctgggctgcccctcctcctccgaggcggcccgtgacttcaagccg
tcgcgggccctcaacggcacggccggcctccccggcggcctccccggcgccgcggccgcc
ggcgggcctcggtccgctgccgcgtcggcggccccggggccatga

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