Petromyzon marinus (sea lamprey): 116955890
Help
Entry
116955890 CDS
T09614
Name
(RefSeq) brother of CDO-like
KO
K20033
cell adhesion molecule-related/down-regulated by oncogenes
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116955890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_DSCAM-DSCAML_C
Ig_3
Pur_ac_phosph_N
V-set
ig
Ig_2
I-set
PRC2_EED_ins
DUF7359
Motif
Other DBs
NCBI-GeneID:
116955890
NCBI-ProteinID:
XP_032833114
UniProt:
A0AAJ7UCA5
LinkDB
All DBs
Position
62:3238938..3269419
Genome browser
AA seq
1115 aa
AA seq
DB search
MGAVAMVTVSALLISMTTTFITAAEPPIPAVSVPSPVRVSVIRGSRVRLSCKSPLADVRL
TWRHSADGQWQSGELWGDPLPPGARVTEVTARSGVTVSKLVIASLDESLAGFYRCLLRTS
GGAAISGPAHVSVIHTNSSASRVSPIRVSVATGSSLVLGCLHPGNSNDNNNNDNNNNDNN
DDNDGEDSDPPPRSVSAWSRPGVAAVPATPSPATLAAPRGRMRMSDVRRSDGGRYACRSP
GAPPADEVAYLVSVTDPPLSASPLQELSTAPGAVAVVSCGGGGGGGRDLSPPRWLRDGRP
LTPDPRLDEGRGLLTIAGVREGDAGVYQCLVERAGLEGGSVTRVTVLTGSPSRHLSSSPP
SSSGASRGREPSVATSSSTSSSSSASTPPPPPTASPATANQSAAGAAPRAQAAAPEAPII
LSPTRTHRPDSYLLQWMPGSSSSSSSSSSSSESGGGAAAAAGSSSSSSSVLDFLIRYREL
SEDGSVGGRWLTVRVPPDQREFSLSQLRASSLYEVEVLARSLRADGQAAMFTFRTGKERS
SKFPAMGAHVVGAGQAKNDSQHGAARTSPEDGGHTVPEAPDRPTVAMASDSSAYVTWIPR
ANGGSPITAFHVEFRRLGGGGAAPPQHSGGGGPAPGGGVGAAPPHHHAAGEWTVAAKGIP
PSKLSVEVKGLQPGATYRFRVAASNACGESARSAASRAYGVGGASDRPSPRPVAGPYITY
TDALSSSKILLKWTYTPEANNNTPIRGFYIFYRPTDSDNDSDYAENVADSEMRHHTIHSL
LPETSYDIKMRVFNDGGQSEFSNVMICETKAARKPHRAHSPRPPTHHDHHHHDNRHRDDD
DDDDDDDDDRGERPSAKPSRSPDKDGGGGGGGGGGGGGGERSGGSGGGALLYLLLGLLLG
LMVLTVLGFIALRGWKARSGARAHGNGVGAAGCVDETQLTELSGYKCRHVYDSAPCNGLY
PHGYGVDPHADIGFTELPQEECRSDGRPTGRAPRSLANGVGGQGSHETSPLNSRRANDEE
EEVIPTTEEQRAPSQSSADPTIDSLGDTDTEPGDGLPTADSDGERRGGVSCDSGLATQAS
SSPSPGHRPPLLQEEAEQQQQQHQQQQQHQQHQQQ
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgggagcggtggccatggtaaccgtctccgcactcctcatctccatgacgaccaccttc
atcacggccgcagagccgcccatcccagccgtctccgtcccgtcaccggtccgagtctcc
gtcatccgcggctcccgcgtccgcctctcctgcaagtcgccgctggcggatgtgcggctc
acgtggagacacagcgcggacggccaatggcaatccggggagctgtggggcgaccccttg
ccccctggcgcccgggtcacggaggtcacggcgaggtcgggggtcacggtctcgaagctc
gtcatcgcctcgctggacgagagcctcgcgggattctaccgctgcctcctgcgaacgagc
ggaggggccgcgatcagcggaccggcccacgtctccgtcatccacacgaactcctccgcc
tcccgcgtctcccccatccgcgtctccgtggcaaccggctcctcgctggtcctcggctgc
ctgcaccccggcaacagcaacgacaacaacaacaacgacaacaacaacaacgacaacaac
gacgacaacgacggcgaggattccgacccgcccccgcgttccgtctccgcgtggagccgt
cccggcgtcgccgccgtgccggctacgccgtcaccagcgacgctggcggcgccgcgtggc
aggatgaggatgagcgacgtgcggaggagcgacggcggccgctacgcctgccgctcgccc
ggcgcaccgccggcggacgaggtggcctacctcgtcagcgtgacggacccccccctctcc
gcgtcccctctgcaggagttgtcaacggctccgggcgcagtggccgtggtgagctgcggc
gggggcgggggcggaggtcgcgacctctcccctccccgctggctccgcgacgggcgaccc
ctgacccccgacccgcggctggacgagggccgcggcctgctgacgatcgccggcgtgcgg
gaaggggacgccggagtttaccagtgcctggtggagcgggcgggcctggagggcggcagc
gtgacccgggtcacagtgctcaccggctcgccgtcgcgacacctctcctcgtcgccaccc
tcctcctccggcgccagcagaggtcgcgagccctccgtcgccacatcatcatcaacatcg
tcatcatcatcggcgtcgacgcctcctccgcctcccaccgcctccccggcgacggccaat
cagagcgcggcgggggcggccccgagggcccaggccgcggcgcccgaggcccccatcatc
ctgagtccgacgcggactcaccggccggactcgtaccttctgcagtggatgccgggctcc
tcctcctcctcctcatcgtcgtcgtcgtcatccgagtccggtggtggtgccgccgccgcc
gccggctcctcctcctcctcctcctccgtgctcgacttcctgattcgctaccgggagctc
tccgaggacggctccgtgggcggtcgctggctcaccgttcgcgtgccaccagaccagcgg
gagttttcgctgtcgcagctgcgggcctcgagcctctacgaggtcgaggtcctcgcccgc
agcctgcgcgccgacggacaggccgccatgttcaccttccgcacggggaaagagcggtcg
tccaagttcccggcgatgggcgcccacgtggtgggggctggccaggcgaagaacgactcc
cagcacggagcggcacgcacctcgccagaggacggcgggcacacggtcccggaggccccg
gaccggcccacggtggcgatggcgtccgactcgtcggcctacgtaacgtggatcccgcgc
gccaacggcggctcccccatcaccgcgttccacgtggagttccggcggctggggggtggg
ggggcggcacccccccaacactcgggcgggggggggccggcgcccggcggtggggtgggg
gccgcccccccccaccaccacgcggcgggggagtggacggtggccgccaaggggatcccc
ccctccaagctctccgtggaggtcaaggggctacagcccggggccacgtaccggttccgc
gtggcggcgagcaacgcgtgtggggaaagtgcacgcagcgcagcgtcgcgagcatacggc
gtgggcggtgcgtcggatcggccgtccccacggcccgtcgctgggccctacatcacctac
accgacgcgctgagctcctccaagatcctgctcaagtggacgtacacgccggaagcgaac
aacaacactccgatccggggcttctacatcttctaccgacccacggacagcgacaacgac
agcgactacgctgagaacgtggctgacagtgagatgcgccaccacacgatccactcgctg
ctgccagagacgtcgtacgacatcaagatgagggtgttcaatgacggcggccagagcgag
ttcagcaacgtcatgatctgcgagaccaaggccgcccgcaagccccacagggcccactcc
ccgcggccccccacccaccacgaccaccatcaccacgacaaccgtcaccgcgacgacgac
gacgacgacgacgacgacgatgacgaccgcggcgagcgaccgtctgccaaaccctcgcgg
tctcccgataaagacggcggcggcggcggcggcggcggcggcggcggcggcggcggtgaa
cggagtggaggctccggagggggcgccctgctctatctgctgctgggactcctcctgggc
ctcatggtgctcaccgtgctcggcttcatcgcgctcagagggtggaaggctcgcagcggc
gcgcgggcgcacggcaacggcgttggggccgccggctgcgtggacgagactcagctgacc
gagctcagtggctacaagtgccggcacgtctacgacagcgcgccctgcaacggcctctac
ccacacggctacggcgtcgacccgcacgcggacatcggcttcactgaattaccccaggag
gagtgccggagtgatggccggcccacaggaagggctccgcgcagcctagccaacggggtt
ggaggtcaagggtcgcatgagacttcacctctcaactctcgaagagcaaacgacgaggag
gaggaggtgatccccacgacggaggagcagagggccccatcgcagagctctgcagaccca
accatcgactcgttaggggacacagacacagagccaggcgacggcctcccgaccgcggac
agcgacggcgagaggaggggcggtgtgtcctgcgactcgggcctagcgacgcaggcctca
tcctccccctcgcctgggcacaggcccccgctgctacaggaggaggccgaacagcagcag
cagcaacatcaacaacaacagcagcatcagcagcaccagcaacagtaa
DBGET
integrated database retrieval system