Petromyzon marinus (sea lamprey): 116956078
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Entry
116956078 CDS
T09614
Name
(RefSeq) partitioning defective 6 homolog beta-like
KO
K06093
partitioning defective protein 6
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04144
Endocytosis
pmrn04517
IgSF CAM signaling
pmrn04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116956078
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116956078
09144 Cellular community - eukaryotes
04530 Tight junction
116956078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116956078
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
116956078
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PB1
Motif
Other DBs
NCBI-GeneID:
116956078
NCBI-ProteinID:
XP_032833413
UniProt:
A0AAJ7UBI4
LinkDB
All DBs
Position
63:complement(2339859..2347889)
Genome browser
AA seq
446 aa
AA seq
DB search
MTRHQKPSLVAPGIVEIKSQFGAEFRRVSIARCPPPRLEEFRALLLRLHGLAGMVGGASA
GGSRKTAAAAAAGGGGGRRGGGGGRGGGELAVCYTVSDGSLLPITNSHNFAKAIAGAAPL
LRITVTIADDAQLATAAVSSSAIAKRGVFSGLRGRDGAPHAPRLPVGPPRDFHPLSSLID
VDVLPASLRRVRLYRHGSARPLGFYVADQGADGRARLGGRGGAGVFISRLLPGGLAASSG
LLSVGDRVLEVNGAPVAGKGLDEVTAMMVANGHHLVITVRPAELERRDGGDDGGVRGGGI
DDEFWTRDLGSSESSVQSLASDGSEGMRLSRRGSQRHHHHQQQQQQKKRNHVKEEVSLTS
RSGGDSDSLALAPLLSDTEPWDSEAEEEEEDLVIDRIGVDRHADFSAAGKPGRPLATYDG
GARNSPWAHRRSGTVTEEGGVITLYL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgacatcagaagccgtcgcttgtcgcccccggcatcgttgaaattaagagccag
ttcggcgcggagttccggcgcgtgtcgatcgcccggtgtccacccccgcgtttggaggag
tttcgggccctgctgctgaggctgcacggcctggcagggatggtgggaggagcgagcgca
ggaggcagcaggaagacagcagcagcagcagcagcaggaggaggaggaggaagacgagga
ggaggaggaggacgaggtggaggggaactggccgtgtgctacacggtgtccgacgggagt
ctgctacccatcacgaacagccacaacttcgccaaggccatagcgggggcggcaccgctc
ctgcggatcaccgtcacaatcgcagacgatgcgcagctcgccaccgcggccgtctcctcc
tccgccatcgccaagcgaggggtgttctccggcctgcgcgggcgcgacggcgccccccac
gccccccggctccccgtggggcccccccgggacttccacccgctgtcgtccctcatcgac
gtggacgtgctgccggcgagcctgcgtcgcgtgcggctctaccgccacggctccgcccgc
ccgctcggcttctacgtggccgaccagggcgccgacggcagggcccggctagggggccgc
ggaggcgccggcgtcttcatctcgcggctgctgcccggcggcctggccgcctcgtcgggc
ctcctctccgtcggggaccgcgtgctggaggtgaacggcgcgcccgtcgccggcaagggc
ctggacgaggtgacggcgatgatggtggccaacgggcaccacctcgtcatcacggtgagg
cccgcggagctggaacggcgggacggcggggatgatggaggagtgaggggaggagggatc
gacgatgagttctggacgcgcgatttgggaagctcggagagctctgtgcagtcgctggcg
tccgacggcagcgaagggatgaggctatcgcgacgggggtcacagcgccatcatcatcat
cagcagcagcagcagcagaagaagaggaaccacgtcaaagaagaagtctctctgacctcg
cggagcggtggcgattcggacagcttggcgttggcgccgctgctgtccgacacggaaccg
tgggacagcgaggcggaggaggaggaggaggatttggtgatcgaccggatcggcgtcgat
cgccatgcggacttctccgccgccggcaagccgggccgaccgctggccacgtacgacggc
ggtgcgcggaactcgccttgggcccaccgacggtcgggcaccgtgacggaggagggtgga
gtcatcacgctctacctctga
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