KEGG   Petromyzon marinus (sea lamprey): 116956080
Entry
116956080         CDS       T09614                                 
Symbol
WDR88
Name
(RefSeq) WD repeat-containing protein 88 isoform X1
  KO
K24757  WD repeat-containing protein 88
Organism
pmrn  Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:pmrn04990]
    116956080 (WDR88)
Domain-containing proteins not elsewhere classified [BR:pmrn04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   116956080 (WDR88)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_C WD40_CDC20-Fz WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_EML NBCH_WD40 Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_WDR75_2nd Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_NWD2_C Beta-prop_VPS8 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 116956080
NCBI-ProteinID: XP_032833416
UniProt: A0AAJ7UDU9
LinkDB
Position
63:2726505..2745118
AA seq 430 aa
MYRSISDRRSPSSCSSAPVAKDISTAEFPHRRSTTFRPKTAARYGQGNEFGHFGRVPSRG
QLPFKVLRGHAGGINCCHFGFGDSRAVTCSEDRTAKIWDTETGRILKSFDDAHQNNIPEC
SVNSTGGRLLTVSWDKAMKLWDLETGKLLMCETHAWPLTCCDASRDGRLLATGTAMDRSL
RLWDVNSGSLVVQRNDHHEGALTGCRFDCGAQRVVTSSCDRSFKVWDLATRVATLSVAGS
HANVLSDCRFGAGGRLVATASWDRTLRLWDVRTGAFREDGPLELRGGHGGSVSSCAFSSD
GSLLVSGGLDQRAVVWDTATGSRGVVLKGHVDWVMDVDVSVDKRWVLTASKDRTMRLWNI
ESMDRIPAAMGHESENAPRVLQCESCRKPLPATRRGAASAAVSRCSPCRSTTPGEVASVL
RRHEAEPHRP
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgtaccgatcaatttctgatcgacgaagcccctcctcctgctcctccgcaccggtggcc
aaggacatttccacggctgaatttccacatcggcgctcgacgacgtttcgccccaaaacg
gccgcgaggtacggtcaaggtaatgaattcggacatttcgggcgcgtgccgtcccgtgga
cagctgccgttcaaggtcctgcggggtcatgcggggggcatcaactgctgccacttcggc
ttcggagactcgcgcgcagtcacctgctcggaagatcgcacggcgaagatctgggacact
gagactgggagaatcctcaagagctttgatgacgcccaccagaataacattcccgagtgc
tctgtcaactctacagggggcaggcttttgacagtgtcatgggataaggccatgaaactc
tgggatttggaaacggggaagcttctgatgtgcgagactcacgcgtggccgctgacgtgc
tgcgatgcgtctcgcgacgggcgtctgctggccacgggcacagccatggaccgttccctc
cgcctgtgggacgtgaacagcggctcgctcgtggtgcagcgcaacgatcaccacgaggga
gcgctcacaggatgcaggtttgattgcggtgctcagcgagtcgtgacctcgtcgtgcgac
cgaagcttcaaggtgtgggaccttgcgacacgcgtggctacgctcagcgtggctgggtcg
cacgcgaacgtgctctccgactgccgcttcggcgccggcgggcgcctcgtggccacggcg
tcgtgggaccgcactctccgcctctgggacgtgcggaccggagccttccgcgaggacggc
cccctggaactgcgcgggggccacggcggctccgtcagctcctgcgccttctcgtccgat
ggctccctgctcgtgtctgggggtcttgaccaacgcgccgtcgtgtgggacaccgccacg
ggcagcaggggcgtcgtgctgaagggtcacgtggactgggtgatggacgtggacgtgagc
gtggacaagcgctgggttctaacggcctcgaaggaccgcacgatgagactgtggaacatt
gaaagcatggaccgcatcccggccgcgatgggacacgagagcgagaacgcgccaagggtc
ttgcagtgcgagtcgtgcaggaagccgctccccgcaacgcgacgcggtgcggcgtctgcg
gccgtgtccaggtgcagcccgtgccgctcgacgacccctggcgaagtcgcctcggtcctg
cggcgtcacgaagccgagccccatcgtccgtga

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