Petromyzon marinus (sea lamprey): 116956161
Help
Entry
116956161 CDS
T09614
Name
(RefSeq) probable endonuclease 4 isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116956161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116956161
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
116956161
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
116956161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
TAL_effector
Motif
Other DBs
NCBI-GeneID:
116956161
NCBI-ProteinID:
XP_032833542
UniProt:
A0AAJ7UE51
LinkDB
All DBs
Position
3:18947050..18957406
Genome browser
AA seq
436 aa
AA seq
DB search
MPRGAKRPSRRGRGGLCLGGDDDEDEEEEEGTEVVRKTRRSKQPRGGDDDEAKEVQNNAD
TEKEVEGTSSEEVTEMRRSAGRKRRGTNKDTVAPKKPRKRRATQAAHDPVEAPVKGLGRK
TTKTETGSPSQPKADVSVGPMLGASGGNSAGRGSHKFVGGHMSISGGLWKAVEESAQLGA
RAFGLFLTSQRTWHTKPLDPCDAQRFRETCKQLGFTPDHIVPHGSYLLNCGSPSTETFEK
SRAALVSELQRCEKLGLVLYNFHPGSSCGQGSTDACLERIASAINYAHERTRGVVTVIEN
MCGQGHTVGGQFEELRGIIDLVADQSRIGVCLDTCHAFAAGYDVSSQEGVQHTLDEFHRI
VGLKFLKAVHLNDSKGKLGCHLDRHENVGRGHIGLEGFRAIMNAPQLDHLPMILETPGSP
SFGYEEEIALLYSLCR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgccgagaggcgcgaagaggccctcacgacggggacgaggagggctgtgcctcggggga
gacgacgacgaggatgaggaggaggaggaggggaccgaggtggtgaggaagaccaggagg
tccaaacagccacgaggtggagatgacgacgaggcgaaggaggtacagaacaatgcggac
acggaaaaggaggtggaggggacatccagtgaagaggtgactgaaatgaggaggagtgcc
ggacgaaaacgtcgggggactaataaggacacggtggctccaaagaagcctcgcaagcgt
agggccacccaggctgcacatgacccagtggaggctccggtcaagggcctgggcaggaag
accactaaaacagagaccggcagtccttctcaacccaaagccgacgtctctgtgggtcca
atgcttggagcaagcggcggaaactcagccgggagaggaagccacaagtttgttggcggt
cacatgtccatttcaggcgggctgtggaaggccgtggaggagagcgctcagctgggcgcc
cgagccttcggcctcttcctgacgtcgcagcggacgtggcacacgaaaccactcgacccg
tgcgacgcccagcgcttcagggagacgtgcaagcagctcggattcacgccggaccacatc
gtcccgcacggatcctacttgctcaactgcggctcccccagcacagagacgtttgaaaag
agccgagcggcgctcgtgtcggagctgcagcgctgcgagaagctggggctcgtgctctat
aactttcacccggggtcatcgtgcggccagggctccacggacgcctgcctggagcgcatc
gcctccgccatcaactatgcgcacgagcgcacgcgtggcgtcgtgaccgtgatagagaac
atgtgcggccagggccacacggtgggcggtcagtttgaggagttgcgcggcatcatcgac
ctcgttgctgaccagagccgcatcggcgtctgcctcgacacgtgccacgccttcgccgca
ggttacgacgtctcgtcgcaggaaggggtgcagcacacactggatgagttccatcgcatc
gtcggactcaagttcctcaaggccgtgcacctcaacgactccaaggggaagctgggctgc
cacctggaccgccatgagaacgtggggcgtggccacattggcctggagggcttccgcgcc
ataatgaacgcgccgcagctcgaccacctgcccatgatcttggagacgccaggaagtccc
tcatttgggtacgaagaggagatcgcgctgctgtactcactgtgccgctag
DBGET
integrated database retrieval system
