Petromyzon marinus (sea lamprey): 116956285
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Entry
116956285 CDS
T09614
Name
(RefSeq) lysosome-associated membrane glycoprotein 1-like isoform X1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03272
Virion - Hepatitis viruses
pmrn03273
Virion - Lassa virus and SFTS virus
pmrn04140
Autophagy - animal
pmrn04142
Lysosome
pmrn04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116956285
03272 Virion - Hepatitis viruses
116956285
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116956285
04142 Lysosome
116956285
04140 Autophagy - animal
116956285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116956285
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmrn04147
]
116956285
04090 CD molecules [BR:
pmrn04090
]
116956285
Membrane trafficking [BR:
pmrn04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
116956285
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
116956285
Other autophagy associated proteins
RNautophagy/DNautophagy
116956285
Exosome [BR:
pmrn04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
116956285
CD molecules [BR:
pmrn04090
]
Proteins
116956285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
Syndecan
Motif
Other DBs
NCBI-GeneID:
116956285
NCBI-ProteinID:
XP_032833659
UniProt:
A0AAJ7XGA5
LinkDB
All DBs
Position
64:complement(2242058..2266990)
Genome browser
AA seq
467 aa
AA seq
DB search
MATTATAAITGLGLFFLLVLSVTGDSVSPTLISTIPLLQNNATTAHNTTTNATTASKPPA
THSYTTKQNHTTTQSSTTASTTALPEPGVGSYNVSQKTLVCLRADLALRLYVNYKDNAGN
IKVGQINVDPNDTRASGNCGDTESLLNLTFSHGFVLAVFTKDKNEFSVTEINATLKYQFP
DTKVEEYSVSSGPVSYTLAPANTSYRCIAKLRLPVTANFSLDLSHVQLQPFNLENGTFSP
VTDCTQDKTTPIPTTTHSPTTTHSPSTSSPPFLPGKYNVSEEGHACLLVDVALEVQVEDS
QNKTHIFVVHPSRTSASGHCQSTTSLLNLTFAEGFIAFTFTTSNKRFHLDQISIDLKLHI
PDAPNDTFVGSKGNLTLFPANLGSSYMCKAKQNESIGDQILLMVSDLRLQPFKVQNDAFS
TAEECTRDVGGVLIPIIVGSVLASLIVVVLVAYLIGRRKNHTGYQSI
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacggcgactgcagcgatcacggggctcggcctcttcttcctcctcgtgctc
tcagtgacaggtgactctgtgtcacccactctgatctccacaataccgctgctgcaaaat
aacgccacaactgctcacaacaccactactaatgcaaccactgccagcaagcctccagcc
acccacagctacacgaccaaacagaaccacactaccacacaaagcagcaccacggctagc
accacagccctcccggagccaggtgtgggttcgtacaacgtgagccagaagactctcgtt
tgccttcgtgcagacctggcgctcaggctgtacgtgaattacaaagacaatgccggcaat
atcaaggtcggccagatcaacgttgatccgaacgatacgagagccagtggcaattgtggt
gacaccgagtcactactcaacctcacgttttctcatggatttgtgctggctgtgttcacc
aaggacaagaatgagttttctgttacagaaatcaatgcaacccttaagtaccaatttccg
gatacaaaagttgaagagtattcggtgtcgagtggcccagtgagctacactctggctccg
gcgaatacctcctacagatgcattgccaaacttcggcttcctgtcactgccaacttctct
ctggacttgagccacgtgcagctgcagccgttcaaccttgagaatggaaccttctcgcca
gtgaccgactgcactcaggacaaaacgacgccgatcccgaccacaacgcactccccgacc
acaacgcactccccgagcaccagcagcccaccgttcctgccagggaaatacaacgtgtcg
gaagagggccatgcatgcttgcttgtggacgtggctctggaggtgcaggtggaggactcg
cagaacaagactcacatatttgtggtgcatccgagtcggacgtctgcatctgggcactgt
caaagcactacttcactactcaacctgacctttgccgaaggcttcattgccttcaccttc
acgacaagcaacaagagatttcacctggaccaaatcagcattgacctgaagcttcatatt
cctgatgcccccaatgatacatttgtgggctcaaaggggaacctgaccctgttccctgca
aacttgggaagctcctacatgtgcaaggctaagcagaacgagagcatcggtgaccagatc
ctgctgatggtcagcgacctgcgactgcaaccattcaaagtgcaaaatgatgccttcagc
acagcggaggagtgtactcgggacgtgggcggcgtgctgatccccatcatagtgggctcc
gtgctcgccagcctcatcgtcgtagtgctcgttgcctacctcatcggcagacgcaagaac
cacaccggataccagtccatctag
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