Petromyzon marinus (sea lamprey): 116956297
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Entry
116956297 CDS
T09614
Name
(RefSeq) uncharacterized protein LOC116956297
KO
K23213
paired amphipathic helix protein Sin3b
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116956297
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
116956297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
Sin3_corepress
PAH
MKRN1_C
Motif
Other DBs
NCBI-GeneID:
116956297
NCBI-ProteinID:
XP_032833691
UniProt:
A0AAJ7XGL4
LinkDB
All DBs
Position
64:complement(4646444..4668125)
Genome browser
AA seq
1923 aa
AA seq
DB search
MESEATEIASTPPILEVEQALEVLCRVKRRFSQEPAIFCSFQDAMRAFHSPSVDPCVALA
RVASVLAGHADLIAAFNSFLPPSYRPRDPGRTKPTMATTITRDVTVKPSPGGGGVRLKGN
GRSSGTGEKAGMGVAADESVESGDTRLGATQSGDMLLSIAASGSGAVVAAVPPDKALGGA
GSRSVGAGRPDEGSTGVCRDGGGGAAVGGERGGGLHGGTDGGGIECVRVEESIRTSVKAG
GSLCCGSDGSDRVRAEETSSTSVEIGGTLHRSSDGSGSVCVRAEQTSSTPVEGGSTLHRS
SDGSGSVCVRAEGSISTSVEGGSTLHRSSDGSGSVCVRAEGSISTPVEGGSTLHRSNDGS
VCVRAEGSISTPVEGGSTLYRSSDASGSVCVRAEGTSSTPVEEGSTLHRSNDASGSVCVR
AEQTSSTPVEGGSTLHRCSDGSGSVCVRAEQTSSTPVEGGSTLHRSSDGSGSVCVRAEGT
SNTPVEEGSTLHRSSDGSGSVCVRAEGSISTSVEGGGTLHRSSDGSGSVCVRAEGSISTP
VEGGSPLHRSSDGSGSVCVRAEGSISTPVEGGSTLHRSSDGSGSVCVRAEGSISTSVEGG
GTLHKSSDGSGSVCVRAEETNSTPVEGGSPLHRSSDGSGSVCVRAEQTSSTPVEGGSTLH
RSNDGSGSVCVRVEQTSSTSVEGGGSLHRSSDGSGSVCVRAEQTSSTSVEGGGSLHRSSD
GSGSVCVRAEQISSTSVEGGGSLHRGGDGGGSVCMRAEGSTSTSVEGGGTLHRSSDGSGS
VCMRAEGSSSASVEGGGSLHRSSDGRGSVCRRAEGSSSASMVVEGGGAAVVRGEEGADGS
GSRPSGFSAAAALVSAVKARFLLRPDVCRRFLHVLHTHQNQWDASREEGAPCCDARLGVR
ECDGDEVPGGVRETVPDGEGEGLGEVECAGGGGDGDESEGDRDGEWEGERCEALSRREVC
AQLCELLKGEEDLLVELKKFLQVDQGSGSPAGDAGDGRGVVAKRRAPTPGPEPAPGPVAT
KRPRMPSLRDPSLAAAGMHGTLREISFFDRVRCALHSPEVYENFLRCVQLFNHNHVSPSA
LLDMARPFLGKFPELLVELRNLLEDVRSEGAGSGAVPGVVATETGARGCSRRVGPSYRSL
PETYEQPRSSTRTALCREVLNDTWASFPSWSEDSTFVSSKKTHFEESIYRCEDERFELDV
VLETNLATVRVLESVLKRLARLPAEEQARFRLDDALGGSSEVVHRKALQRAYGERGATDI
IAALKLNPAATIPHVLKRLKAREDEWREAQRGFTRLWRDQGERFQVRSLDHRGITFRSAD
TKALRTKALVNEITALRDERVEQQGGVRVGAVRGGAALAGPHLCLEYADRSVLPDAAALI
LHQARHQAGLRGAELRRAAKILLFLLPDVLFTARADASLIPQDDSDEDEEEEAAGAAAGG
SGSGGSGAGEAEGAGSGEDGRCREERRCRMVERGERPIGLRERPSPTASDGGAARDAGEQ
RGSGGEQRGANLEQRGNVPEQRGASSEQRRASGTSAEQEGDFATSSLDQARELSAVDGVY
TLLFANTSWYVFLRLHQLLCARLLAIRSETSTATPGLSREQREVRRDDADRGGADRDGAS
AGDGGAVAAVGGSAGEGTRRSSAAEPAEPCGPASTTAPDAPDGHYGVFLRHVRDLVDGQL
EAPEYEERLRESYGVTAYVAYSMDRLLQNACRQLQHMVCDEACAGVLALYLDGCRGGASG
GVLASQAVRAPLEASYQRQARRLLPDEHCYKVMFVKTDGCVLMTMELLDVEEDSPVDLQE
IQKWSDYVQRYAGSVETSPVVASRAPVFLGRNLWAGGSRPRPPPGGSRVVFSEGLRCSFR
PRSFRMLYVIHSEDVLYRRGALRAARQTLTACSERRRRAFRRFVRTWRERRASRAEAEGG
RVA
NT seq
5772 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgaggccaccgagatcgcgtccacaccgcccatcctggaggtggagcaggct
ctggaggtcctgtgccgcgtgaagcgccgtttctcgcaggagccggccatattttgctcc
ttccaggacgctatgagggcctttcactctcccagcgtggacccgtgcgtggcgctagcg
cgagtggcgtcggtgctggccgggcacgccgacctcatcgctgcgtttaactccttcctc
ccgccctcgtaccgcccacgtgacccgggccgcaccaaaccaacgatggcgacgacgata
acacgggacgtgacggtgaagccgagtccgggaggcggtggcgtgcgtctcaaagggaac
gggcgcagcagcggcacgggagagaaagcaggcatgggcgtcgcagcagacgagagcgtg
gagtcgggagacacgaggctgggagcgacacaaagcggggacatgctgctgagcatcgca
gcctccggcagtggtgcagtagttgcagctgtgcctcctgataaagccctgggtggtgca
ggctcacgcagcgtaggtgcaggtcgccccgatgaaggtagcacaggtgtttgccgtgat
ggaggcggcggtgcagcagtaggcggggagagaggtggtggtctacatgggggaactgat
ggtggtggtattgagtgtgtgagggtggaggaaagcattcgcacatctgtgaaggcaggt
ggcagtctatgttgtggcagtgatggaagtgatagggtgagagcagaggaaaccagtagc
acatctgtggagataggcggtactctacacaggagcagtgatggtagtggtagtgtatgt
gtgagagcggagcaaaccagtagcacacctgtggagggaggcagtactctacacaggagc
agtgatggtagcggtagtgtatgtgtgagagcggagggaagcattagcacatctgtggag
ggaggcagtactctacacaggagcagtgatggtagcggtagtgtatgtgtgagagcggag
ggaagcattagcacacctgtggagggaggcagtactctacacaggagcaatgatggtagt
gtatgtgtgagagcggagggaagcattagcacacctgtggagggaggcagtactctatac
aggagcagtgatgctagtggtagtgtatgtgtgagagcggagggaaccagtagcacacct
gtggaggaaggcagtactctacacaggagcaatgatgctagtggtagtgtatgtgtgaga
gcagagcaaaccagtagcacacctgtggagggaggcagtactctacacaggtgcagtgat
ggtagtggtagtgtatgtgtgagagcggagcaaaccagtagcacacctgtggagggaggc
agtactctacacaggagcagtgatggtagtggtagtgtatgtgtgagagcggagggaacc
agtaacacacctgtggaggaaggcagtactctacacaggagcagtgatggtagcggtagt
gtatgtgtgagagcggagggaagcattagcacatctgtggagggaggcggtactctacac
aggagcagtgatggtagtggtagtgtatgtgtgagagcggagggaagcattagcacacct
gtggagggaggcagtcctctacacaggagcagtgatggtagcggtagtgtatgtgtgaga
gcggagggaagcattagcacacctgtggagggaggcagtactctacacaggagcagtgat
ggtagcggtagtgtatgtgtgagagcggagggaagcattagcacatctgtggagggaggc
ggtactctacacaaaagcagtgatggtagtggtagtgtatgtgtgagagcggaggaaacc
aatagcacacctgtggagggaggcagtcctctacacaggagcagtgatggtagcggtagt
gtatgtgtgagagcggagcaaaccagtagcacacctgtggagggaggcagtactctacac
aggagcaatgatggtagcggtagtgtatgtgtgagagtggagcaaaccagtagcacatct
gtggagggaggcggtagtctacacaggagcagtgatggtagtggtagtgtatgtgtgaga
gcggagcaaaccagtagcacatctgtggagggaggcggtagtctacacaggagcagtgat
ggtagcggtagtgtatgtgtgagagcggagcaaatcagtagcacatctgtggagggaggc
ggtagtctacataggggcggtgatggcggtggtagtgtatgtatgagggcggagggaagc
actagcacatctgtggagggaggcggtactctacacaggagcagtgatggtagcggtagt
gtatgtatgagggcggagggaagcagtagcgcatctgtggagggaggcggtagtctacac
aggagcagtgatggtcgtggtagtgtatgtaggagggcggagggaagcagtagcgcatct
atggttgtagagggaggtggtgctgcggttgtgcgcggggaggagggagctgatggttcc
ggctcgcgtccctccgggttctcagcggcagcggcgctggtgagcgcggtgaaggcgcga
ttcctcctccgcccggacgtgtgccgccgcttcctgcacgtgctgcacacccatcagaac
cagtgggatgcgtcacgtgaggagggtgcgccatgttgcgatgcgcgtctcggtgtgcgt
gagtgcgatggggacgaggtgcctgggggcgtgcgggagaccgtgcccgatggcgaaggt
gaaggcctgggtgaggttgagtgtgcgggtggcggtggcgacggcgatgagagcgagggt
gaccgcgatggtgagtgggagggtgagcggtgcgaggcgctgtctcgccgggaggtgtgc
gcccaactgtgcgagctgctcaagggcgaggaagacctcctcgttgagttaaagaagttt
ctgcaagttgaccagggctcgggctcgccggctggggacgccggcgacggccgcggtgtg
gttgccaagaggcgagcgccaacaccagggcctgaaccagcgccggggccagttgccacc
aagcgaccaaggatgccgagcctgcgcgacccgagtctggcagctgccgggatgcacggg
acactgcgcgagatctccttcttcgaccgggtgcgctgtgcgctgcacagccctgaagtg
tatgagaatttcctgcgctgtgttcagctcttcaaccacaaccacgtgtctccctcggca
ctgctggatatggctcggccattcctggggaagttcccggagctgctggtggagctgcgg
aacctcctggaggacgtgcggtcggagggtgcgggttcgggcgcggtgccgggtgttgtt
gccacggagacgggggcgcgaggctgcagtcggcgcgtcggcccaagttaccggtccctg
ccggagacgtacgagcagccgcgcagcagcacgcgcacggcgctgtgccgcgaggtgctg
aacgacacgtgggcatcgttcccatcgtggtccgaggactcgacgttcgtgagctccaag
aagacgcacttcgaggagagcatctaccgctgcgaggatgagcgcttcgagctggacgtg
gtgctggagacgaacctggcgacggtgcgggtgctggagagcgtgctcaagcggctggcg
cggctgccggccgaggagcaggcgcgcttccgcctggacgatgcgctgggcggctcctcc
gaggtggtgcaccgcaaggcgctgcagcgcgcgtacggggagcgcggggccaccgacatc
atcgccgcgctcaagctcaacccggccgccaccatcccccacgtgctcaagaggctgaag
gcgcgcgaggacgagtggcgcgaggctcagcgcgggttcacgcggctttggcgcgatcag
ggcgagcgcttccaggttcgctccctcgaccaccgcggcatcaccttccgctcggccgac
accaaggcgctgcgcaccaaggccctcgtcaacgagatcacggccctgcgcgacgagcgt
gtggagcagcagggcggtgtgcgtgtcggcgccgtgcgcggaggagcggcgctcgcaggg
cctcacctgtgcctggagtatgccgaccgctccgtgctgcccgacgcagccgcactcatc
ctgcaccaggcacggcaccaggccggtctgcgaggcgcggagctgagacgcgcggcaaag
atcctcctgttcctgctgccggacgtcctcttcacggcccgcgcggacgcctcgctcatc
ccacaggatgacagtgacgaggatgaggaggaggaggcggctggtgctgctgctggagga
agcggcagtggcggcagtggagcaggggaggccgagggcgccggcagcggcgaagacggg
cggtgtcgggaagagcgccggtgccgcatggtggagcgtggagagcggcccatcggcctc
cgtgagcggcccagccccaccgcgtccgacgggggagccgcgcgcgacgccggcgagcag
cgaggatccggcggggagcagcggggagccaacttggagcagcgagggaacgtcccggag
caacgaggtgccagttcggagcagcgaagggccagcgggaccagcgcggagcaggaggga
gactttgcgaccagctccctggatcaggctcgcgagctgagcgctgtggacggcgtgtac
acgctgctgttcgccaacaccagctggtacgtcttcctgcgcctccaccagctgctgtgc
gcccgcctgctcgccatccgctccgagacgagcaccgccacgcccggcctcagcagggag
cagagggaagtgcggcgggacgacgctgaccgaggcggcgccgacagggacggggcgagt
gccggagacggcggcgccgtcgccgccgtcggcggcagcgccggggaggggacccgtcgt
tcgtccgcggcggagccggcggagccgtgcggccccgcgtcgacgacggccccggacgcg
ccggacggacactacggcgtgttcctgcggcacgtgcgcgacctggtggacgggcagctc
gaggcgcccgagtacgaggagcggctgcgcgagtcctacggcgtcacggcctacgtggcc
tacagcatggaccgcctcctgcagaacgcctgccgccagcttcagcacatggtgtgcgac
gaggcgtgcgccggcgtgctggcgctctaccttgacgggtgccggggcggcgcgagcggg
ggggtcctcgcctctcaggccgtgcgggcgccgctcgaggcctcgtaccagcggcaagcg
cggcgcctcctgcccgacgagcactgctacaaggttatgttcgtgaagaccgacggctgt
gtgctcatgactatggagctgttggatgtagaggaagattctccagtcgacctgcaggaa
atacagaagtggagcgactacgtgcagcgctacgcgggctccgtggagacgtcccccgtc
gtggcctcgcgagcccccgtcttcctcgggaggaacctgtgggcgggtgggtcacgcccc
cgccccccgcccggtgggagccgcgtggttttctcggaggggctgcgctgctccttccgc
ccgcgctcgttccgcatgctctacgtgatacactcggaggacgtgctgtaccggcgcggc
gcgctgcgtgccgccaggcagacgctgacggcgtgctcggagaggcgacgcagagcgttc
agaaggtttgtgcggacctggcgggagaggagggcgagccgggccgaggcggagggcggt
cgcgtcgcgtag
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