Petromyzon marinus (sea lamprey): 116956327
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Entry
116956327 CDS
T09614
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1-like isoform X1
KO
K15516
fragile X mental retardation protein
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116956327
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116956327
Factors involved in mRNA localization
Other mRNA localization factors
116956327
mRNA cycle factors
Stress granule specific factors
116956327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
KH_1
Agenet
FXR_C1
KH-I_KHDC4-BBP
KIF2A-like_1st
Motif
Other DBs
NCBI-GeneID:
116956327
NCBI-ProteinID:
XP_032833749
UniProt:
A0AAJ7XGD2
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All DBs
Position
64:complement(4996551..5033633)
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AA seq
693 aa
AA seq
DB search
MRSARKMDDVSVEVRGSNGAFYKAFVKDIHEDSLTVTFENSWQPERQIPFQDVRLPPPDD
CGKVITEGDEVEVFSRANENEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTVERLRP
VNPNKPVGKNSFRKFSIPVPEDLRQACVDEATHRDFKKAIGANSVVFDTESSSLVVMSTC
ESTVKRASLLSDMHFRSIRTKLLLLARNQEATKQLETTRQLAAAFREEFSVRDDLIGLAI
GAHGANIQAARRVPGVSAIELDEEGGAFRIFGETPEAVRQARSMLEFTEDSVQVPRLFVG
KVIGKNGKAIQEIVDKSGVVRVKIEGDDTKKHTREEGMVPFTFVGTKENLSNARVLLEYH
LSYLKEVEELRMERLQIDEQLRQIGLGSRSALLGGRPGERERPDAPTGPAAAADDSTPPG
GPTRGGRSYLGRGRGRRAYNSGYGTNSEHSNASETESERRDEPRGRGGPARGRGSTPTAR
GGAARGAAFAQGGKEMAGANSLGFAEDAERAGDTDGSDAWPRPRRKQSRRRRTDEDAVVI
DSVSESDTTSVNGNDEGEEPSRNKRRNRSTRRRMPGPSSPSQERQPVTVADFISRAESQS
RQLPTPADSGKTPNAQDRGGAIAAGVAERGDAAPKPPGAAVNGASKQLQQRGSRERGARR
GDKLEGKVDAAAPAAAAAAAAAATKTVMLNGTD
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcgcgcgcaagatggacgacgtctcggtggaggtgcgcggctccaatggggcg
ttttacaaggcttttgtaaaagacattcatgaagactcgctgacagtcacatttgaaaac
agttggcagccagagaggcagatcccattccaggacgtgcggctgcctcctcccgatgac
tgtggcaaggtcatcaccgagggggatgaagtggaggtgttctccagagccaacgagaat
gagccgtgcgggtggtggctggcgcgcgtgcggatgatgaagggcgagttttacgtgatc
gagtacgcggcctgcgacgcgacgtacaacgagatcgtgacggtggagcgcctcaggccc
gtgaaccccaacaaacctgtgggcaagaacagcttccgcaagttcagcatccctgtcccg
gaggacttgcggcaagcgtgtgtcgatgaggccactcacagagacttcaagaaggccatc
ggagccaactctgtcgtgtttgacaccgagagtagcagcctggtcgtcatgtccacgtgc
gagtcgacggttaagcgtgcgagcttgctcagcgacatgcacttcaggagcatccgcacg
aagctgctgctgttggcgcgcaaccaggaggccaccaagcagctggagacgacgcgacag
ctggcggcggcattccgcgaggagttttcggtgcgcgacgatctcatcggcctggcgatc
ggcgcgcacggcgccaacatccaggcggctcgccgtgtgcccggcgtttcggccatcgag
ctcgacgaggagggcggagccttccgcatcttcggcgagaccccggaggccgtgagacag
gcgcgcagtatgctcgagttcactgaggactccgtgcaagttccaaggttgtttgtcggc
aaggtgatcggtaaaaatggcaaagcaatccaggagatcgtcgataaatccggcgttgtt
cgggtcaagattgagggcgatgacaccaagaagcatacgcgcgaagagggaatggtgccg
tttaccttcgttggcaccaaggagaatttaagcaatgcacgcgttctgctggagtatcac
ctctcttatctcaaggaggtggaggagctgcgtatggagcggctgcagatcgacgagcag
ctccgtcagatcgggctgggctctcgctcggcgctgctgggcggccgtcccggcgaacgc
gagcggcccgacgcccccaccgggcccgctgccgccgctgatgactcaacaccaccgggg
ggcccgacacgcgggggtcgctcatacctgggccgcgggcgcggcagaagggcctacaac
tcgggatacggaaccaactccgagcactcgaacgcgtccgagacggagtcggagagacgg
gacgagccgcgaggccgcgggggccccgcccgcggcaggggcagcacccccacggcgcga
ggtggggcggcaaggggagccgcctttgcccaagggggaaaggagatggcgggcgccaac
tcgctgggattcgccgaggacgcggagcgggcgggcgacacggacggcagcgacgcgtgg
ccccggccgcggcggaagcagtcgcgcaggcggcgcacggacgaggacgccgtggtcatc
gactcggtcagcgagtccgacaccacctcggtcaacggcaacgacgagggagaggagccg
tcacggaacaagagacgcaacaggagcactcgccggagaatgcctgggcccagctcgccg
agccaggagaggcagccagttactgtggcagatttcatttcaagggccgagtctcagagc
agacagttgccaacacccgctgattctgggaagacccctaacgcacaggaccgcggcggc
gccatcgccgccggcgttgccgagcgcggagacgctgcgccaaaacctcccggcgccgcg
gtgaacggcgccagcaagcagctgcagcaaagaggatccagggagcgaggggccaggagg
ggagacaagttggaggggaaggttgatgcagctgccccagcagcagcagcagcagcggct
gcggcagccaccaaaaccgtgatgcttaatggcaccgactag
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