Petromyzon marinus (sea lamprey): 116956328
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Entry
116956328 CDS
T09614
Name
(RefSeq) autophagy-related protein 16-like isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04136
Autophagy - other
pmrn04140
Autophagy - animal
pmrn04145
Phagocytosis
pmrn04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
116956328
04140 Autophagy - animal
116956328
04136 Autophagy - other
116956328
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116956328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116956328
03029 Mitochondrial biogenesis [BR:
pmrn03029
]
116956328
Membrane trafficking [BR:
pmrn04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
116956328
Others
Specific organelles associated proteins
Auto phagosome
116956328
Mitochondrial biogenesis [BR:
pmrn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116956328
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
ATG16
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_SCAP
CFAP251_N
Beta-prop_VPS8
PAC11
eIF2A
Beta-prop_DCAF12
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_NOL10_N
Beta-prop_ACSF4
ASA1
Beta-prop_DCAF4
DMPK_coil
Tricorn_2nd
Rod_CreS
DUF4200
Plectin_PPL
Par-4_C
FPP
CLIP1
WIT1_2_N
Baculo_PEP_C
FKBP15
TMF_DNA_bd
Sas-6_C_CC
BEGAIN_coil
Tricorn_N
DUF1664
INO80F
Nucleoprot-TPR
TSC22
COG3_N
Utp14
MAD
CEP135_N
PEA2_C
ADIP
DUF2959
Motif
Other DBs
NCBI-GeneID:
116956328
NCBI-ProteinID:
XP_032833752
UniProt:
A0AAJ7XGX4
LinkDB
All DBs
Position
64:complement(506375..546842)
Genome browser
AA seq
619 aa
AA seq
DB search
METEWRRSIARQLRQRDRGSRDAFGELIQRYTRLLEKADLQSLLSERLQKETHDGQGHAD
PSSSHDGAAQGAEISALRMKHQEELTTLHKIRGELAQDVIELNHKLSAKEQQLQEMQTRL
AESEVRAGGLQAEVDRLRAELAELQAATQTVKDEYEALQMACTALESRLRRIEEDNRELV
ARWMAEKAIEADRVNTENEKDTRRRQAKLRKELAEAAQEHVNVDLDDDIEVLAEEATEGA
AGEQPAKLDRGTRPPVGSPSLPGGTPLPGLLDSLSNMFGVNVLHAYGAAPEHHANSKRRA
SSVVSTGEGQVAPSSVCLAARLPERAICKFDAHDGEVNATRFSPNSRLLVTGGTDRKVKL
WDVIAGKTECRGTLSGSNAGITSLDFDNTGTYLLASSSDFASRIWTVDDFRLRHTLTGHS
GKVLSAKFMSDFVKIVSGSHDRTLKLWDLRSRACIRTIFAGSSCNDVVCSEQCVISGHYD
KKIRFWDTRSESVRTELELPGRVTSLDLNAERTELLSCSRDDSLRITELRTNSTRVSLTA
EGFKCGADWTRAVFSPDGQYVTAGSADGTLFVWNAATGHVERSLSRHHSAAVNAVAWSPS
GEYILSVDKAKRAVLWSDL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaatggaggagaagtatcgcgcggcagctgagacagcgagaccggggctcg
cgcgacgcgttcggggagctcatccagagatacacgcgcctgctagagaaggccgacctg
cagtctcttttgagcgagcgactacagaaggagacacatgacggacagggtcacgcggat
cccagcagtagccatgacggggcggcacagggagcggagatttctgctctgcgcatgaag
caccaagaggagctaactacgctgcacaagatacgtggggagttggcgcaggatgtgatt
gagctgaaccacaagctctcggcaaaggagcagcagttgcaggagatgcagaccaggctg
gcagagagcgaggttcgggccggcgggctgcaggccgaggtggatcgcctgcgcgccgag
ttggccgagctgcaggcggcaacgcaaacggtgaaggacgagtacgaggcgttgcagatg
gcttgcaccgcacttgagtcacgcctccgccgcattgaggaggacaaccgcgagctggtg
gcacgctggatggccgagaaagccatagaggctgaccgtgtcaacaccgagaatgagaag
gacacgcggcggcgccaggcaaagctgaggaaggagcttgcggaggctgcacaggagcac
gtcaacgttgacctagacgatgatatcgaggttttggctgaggaagcgacggagggggca
gcgggtgaacaaccagcgaaactcgacagaggcacgaggcctcccgtgggctccccctcc
ctccctggtggaactcccctccctggccttctcgactccctctccaacatgtttggtgtg
aatgtcctgcatgcgtatggagcggcacctgaacaccacgcaaacagcaaaagaagagcc
tcgtcagtggtgagcaccggcgagggtcaggtcgctccctcctccgtgtgtctcgccgcc
cgcctgcccgagagggcaatctgcaagtttgacgcccatgacggtgaggtgaacgccacg
aggttcagccctaactcacggcttctggtgacaggcggcactgaccgcaaagtgaagctg
tgggacgtgatagccggcaagacggagtgccgtgggacgctctccggcagcaacgccggc
atcaccagcctcgatttcgacaacacgggcacctacctccttgcctcctccagtgatttt
gcaagccgcatctggactgtggacgacttccgtctgcggcacacgttgactggtcactcg
gggaaggtgcttagcgccaagttcatgagtgactttgtgaagattgtatcgggcagccac
gatcgcacactcaagctgtgggatctgcgaagccgggcatgcattcgtacaatctttgcg
ggctccagctgtaacgacgttgtgtgctcggagcagtgcgtcatcagcggccactacgac
aagaagatccgcttctgggacacacgctcggagtctgtgcgtacggagctggagctgccg
gggcgcgtcacgtcactggacctcaacgcagagcggacggagctgttgagctgctctcgg
gacgactcgctccgcatcaccgagctgcgcaccaacagcacgcgcgtctctctcacggcg
gagggctttaagtgtggagcggactggacgagagctgtcttcagtccggatggacagtac
gtgacggccggctcggcggacgggacgctgtttgtgtggaacgccgccacagggcacgtg
gagcgctctctctcccggcaccacagtgcggcggtgaatgcagtggcgtggagcccttcg
ggggagtacatcctgagcgtggacaaggccaagcgcgccgtgctgtggtccgacttgtga
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