Petromyzon marinus (sea lamprey): 116956377
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Entry
116956377 CDS
T09614
Symbol
SLC6A5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116956377 (SLC6A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmrn02000
]
116956377 (SLC6A5)
Transporters [BR:
pmrn02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116956377 (SLC6A5)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
116956377
NCBI-ProteinID:
XP_032833846
UniProt:
A0AAJ7UCC4
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Position
65:complement(3770598..3861243)
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AA seq
831 aa
AA seq
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MDPITNPDGPSPAAQHESQTPPLAAMTEASQSHSHAAEPDPPAYPGAPSQAAPQGETDPP
LSWPNSTAAAATATATAGATATATGAASFDPTSCEPGRAKRELNCSPATTQLPSAMSRPV
NFADPPVQNQQPGVCAGEGRPGDGAATATASAGSAAASSSWKASSRRKKKGSIISWKEPS
SGRRESWRHEAGSTVMMGARGSVTVLSGLMNRKMSDVGDENQARGNWSSKLDFILSMVGY
AVGLGNVWRFPYLAFRNGGGAFLIPYLLMLALAGVPIFFLEVAIGQFASQGPVSVWKAIP
ALQGCGIAMLIISVLIAIYYNIIICYTLFYLFASFTSALPWGSCTNEWNTPNCRGPRHEQ
MDACLGILNLTGRPLNSSVCERLFGNVSLANRTRPESVSGSEEYFKFFVLKISEGIDRPG
EIRWHLALCLLLAWIIVYLCLVRGIKTSGKVVYFTATFPYVVLVILLVRGVTLPGAFDGI
LYFIKPKWEKLFEATVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNVYRDTLIVTCTNS
ATSIFAGFVIFSVIGFMAHLLKVDIQQVADEGPGLAFVVYPEALTHLPISPLWAILFFLM
LLTLGLDTMFATLETIVTSVADEFPKYLRAHKPLFTMCACIIMFILGFPMLTEGGIYMLQ
LVDTYAASYSLIIIAIFELVGISYIYGLNRFCEDIEMMIGFQPSYFWRICWAFLTPTILT
FILGFSFYQWTPMTYEAYHYPPWSMAMGWLMVASSVIWIPIMFVVKMYLAPGSFIERLKL
VCMPQPDWGPFLVQHRGERYRHQMDPLGTSSLGLKLPRKDVEMSADVMGVA
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggatcccatcacgaacccagacggcccatcaccagcagcgcaacacgaaagccaaacg
ccgccgcttgcagccatgaccgaggcttcccagtcccactcccacgccgcggagcctgac
cctcctgcctaccctggtgcaccgagccaggcagccccgcaaggcgagaccgacccgcca
ttatcctggcctaacagcaccgccgccgccgcgaccgccaccgccaccgccggcgccacc
gcgaccgccaccggcgccgcaagcttcgaccccacgtcctgtgaaccgggccgtgccaaa
cgggagctcaactgcagcccggccacgacgcaacttccctccgccatgtcgcgcccggtg
aattttgccgacccccccgtgcagaaccagcagccgggcgtctgtgccggggagggcagg
cccggtgacggtgctgctacggccaccgcctccgccggcagcgccgccgcctcatcctcc
tggaaggcgtcgtctcggcgcaagaagaagggcagcatcatttcctggaaggagccttca
tcgggccgcagggagagctggaggcacgaggctgggagcacggtgatgatgggggcgcgg
ggcagcgtcaccgtcctctccgggcttatgaaccgcaaaatgagcgacgtgggtgatgag
aaccaggcacgtgggaactggtccagcaagctagacttcatcctctccatggtgggctac
gctgtggggcttgggaacgtctggcgcttcccctacctggccttccgcaacgggggcggt
gcgttcctcatcccgtacctgctcatgctcgcgctggccggggtgcccatcttcttcctg
gaggtcgccatcggccagttcgccagccagggcccagtgtccgtgtggaaggcgattcca
gccctgcagggctgcggcatcgccatgctgatcatctcggtactgatcgccatctactac
aacatcatcatttgctacaccctcttctacctcttcgcgtccttcacctcggcgctgccc
tggggctcctgcaccaatgagtggaacacccccaactgtcgcgggccccggcacgagcag
atggacgcgtgtctcggcatcctgaacctcaccggtaggcccctcaacagctcggtgtgc
gagcgcctgttcggcaacgtgtcgctcgccaaccgcacgcggccggagagcgtcagcggc
agcgaggagtacttcaagttctttgtgctgaagatctcggagggcatcgaccgtccgggc
gagattcgctggcacctagcgctgtgcctgctgctcgcctggatcatcgtctacctctgc
ctggtgcgcggcatcaagacctcgggcaaggtggtgtactttacggccacgttcccgtac
gtggtgctcgtgattctgctggtgagaggggtcaccctgcccggggcattcgacggaatc
ctctacttcatcaagcccaaatgggagaagctcttcgaggccacggtgtggaaggacgca
gcaactcagatcttcttctcgctgtcggccgcttggggaggacttatcaccctctcctcc
tacaacaagtttcacaacaacgtctaccgggacacgctgatcgtgacgtgcaccaacagc
gccacgagcatcttcgccggcttcgtcatcttctccgtcatcggcttcatggcgcacctc
ctcaaggtggacatccaacaggtggcggacgaagggcctggcctggccttcgtggtctac
ccagaggccctgacccacctgcccatctccccactctgggccatcctcttcttcctcatg
ctcctcacgctgggcctcgacaccatgttcgcgaccctggagaccatcgtgacgtccgtg
gccgacgagttccccaagtacctgcgcgcgcacaagccgctgttcacgatgtgcgcgtgc
atcatcatgttcatcctgggcttccccatgctcaccgagggaggtatctacatgctacag
ctggtggacacctacgctgcctcgtactccctcatcatcatcgccatctttgagctcgtc
ggcatctcctacatctacggtctcaacaggttctgtgaagacattgagatgatgattggc
ttccagcccagctacttctggaggatctgctgggccttcctcacacccaccatcctcacc
ttcatcttgggattcagcttctaccagtggacgcccatgacgtacgaggcctaccactac
ccgccctggtccatggccatgggctggctcatggtagccagctcagtcatctggatcccc
atcatgttcgtcgtcaagatgtacctcgctccgggaagcttcatcgagcggctcaagctg
gtgtgcatgccccagccggactgggggcccttcctggtgcagcatcgtggcgagcgctac
cgccaccagatggaccctctgggcacctcctcgctgggcctcaagctgccccgcaaagac
gtggagatgagcgccgacgtcatgggcgtcgcctag
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