Petromyzon marinus (sea lamprey): 116956408
Help
Entry
116956408 CDS
T09614
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta-like
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116956408
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmrn01009
]
116956408
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
116956408
Protein phosphatases and associated proteins [BR:
pmrn01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
116956408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
Fn3_Dep-1_4th
FN3_Tor_3rd
PTP_tm
PTP-SAK
Tc-R-P
Ricin_B_lectin
PTP-NADK
DSPc
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
116956408
NCBI-ProteinID:
XP_032833890
UniProt:
A0AAJ7UCK9
LinkDB
All DBs
Position
65:3145325..3241732
Genome browser
AA seq
2713 aa
AA seq
DB search
MPALILLCLLLAAVNVFADPFQMRNAKSPDCLSTVAGSPRLWMAKCDERLPGQRWLWLPG
GRLRSHAEGSCLGYSGSRFHLGQPASLVSCRHAPGWSCVTRDRDADLLAVRDRSLLLSKQ
GTWVVVRHFERKYPSSWRRAEPGRSLASLCAEPRPTYEEEEEVELKVRAEYKVALPSDEA
ELSSNETSTQRTQPIPVATAAASPTTTTTTTTTATTTTTTTPPPTTTTTATTTAASTPTP
QPDCGVRHLTADVFLQGALLTWSAVSRGCSFTARYVGEDGFDSQLADCDGGGGGAGGGRE
AAASAAAAAVPMYSCTLSDLRPGSGYRVDVRPARGVGSAASLPIRTVPEAVSRLHVLRDA
TTERSLTVSWLPPPGAAHGYEVLAEAKEPNGPPGRAVAEVVEAVAAAAAALPLSATVGRL
SPGTRYEVSVRARAGDRQGAWARVEATTWAPAARARPSSRGTPPRAARRPWWCERPRRRP
PSRRGGSGPSRDSPSLPPSTRQWALRDVTPGRAYAVSVRSLLGGGGGAHSEAVVTYRADP
APVPRLAVTGGPSPGELSVSWAATPGDADRYEVTVRPATPDEAGAAVAAVAVVPSPPAPL
RSLSVPAAAAAVGDLSCRFRDLEPGREYAVTVSVVSGDASAGSTGSGSAAPAPASDLAVN
SSSREASVSWVAARGRASRCELSLLAAASGELVSSHAVPCRPARARGDRGDDGKDGTEEA
GRLRFTVPGVYPGRAYRVCVDTHARGQVARACEETRAVPLAVSDLRVHNVSTSGVSIAWT
RPHSDLDTYRVLLHAPEAQADLRPAPERLLPEPRGLPPGRDSLEAGRPDLQSEPQDHQPR
RRDVRLQRPDLQQGRPDVEQGRSDLQQGRSDVQQGRSDLQQGRSDLQQGSPDLQQGRPDL
QPGHPDLQAARQDVQQGRQEVQPERRDLHERTLPRDATETVFHNLTAGRLYFILVFTISG
NLSSFSSVSARTLPSPVPDLRADNGGAVDSLRVSWGPAAGDVDGLRVSLLRGKSLVTEAS
LPPGAREHAFGGLVPGGRYLVQVAALSGGRAATASVSELTVPGSAVDVAATNAGRGDLLR
VSWAPPAVGVVDRYRLTVRRAGGGGGGGEAVYSQEQPRWVTETSVWSLVPGRVYTVSVET
CSGTYCNRSDVAAQTHPAAVSGVRVAERRQDGLRLAWTAAAGDVDHYAVRWEAVSKRPGA
TAQDGASRGGAAQLANDTTEIELRQLTPGSAYSVTIETWAGDAHSDVVTEERTMPAEVRN
LAVRNQNEAGAGAGLVASWVRPAGDYDDFLVALRHEGEAVRSETVARDGTGCTFRRLTPG
RRYALTVVTRSGPYDSPAVAYGKTQPAAVSRLRVEERSTDRLLLRWDPPVGDADRVEVRL
VASVSPGGVDPASLPSSSDGYVARELAPGRVYNASVTTWSGQERRTASIAAQTEMSCKSP
TSSRSPHFSTSLGPSRRPHLRVAHVSTSPTSRRRPRLHVARISTSPASTRRPPHHISHVS
TSPASPRRPRLHVARISTFPTSPRHPHLHVAHVSTSPASPRHPHLHVAHVSTSPTSPRRP
HLHVAHISTSPTSPHFPHLHVAHVSAPRSAPGSVRALAAVGLDSRSLSVTWSPAPGDVTS
YLVSLWPPLGGSGGGGGVGAAGTKRNLTLPPSATNATVGRLAPGHEYRVAVAAVSGALSG
EPEVITGRTVPGTVSNLVVDNRYSTDLLMARWRPSPGKVDAYLLRLTDGNGSLVANATAE
PGDAEFSFPGLVPGSPYRVAVTATSGGVSSTAVSAEGRTVPASVPSVFADNDGRPAQLSV
RWHPCPGAAEHYMVQLLSPNDSLISSQLVPAARARHAYGDLTPGRLYRVRVFTVSGGLFS
SAATAQARTLPATVTGLRSTDANSTDSLRFAWTAASGDHDFYEIRLHSADDKALLESKLG
APAVGGWDFGGLAPGRLYTLSVTTYSAELMSETSVQARTLPRAPLRLSFRNVSTTAAELV
VDYPWVAGVADLSVVVRPSHPGLRVRPRPPGAGGAPLDARRWLAGLVPGRGYAVAVRALS
GGVLPTISEACHGFVRTVPLRPAAFHCRPENSTALSCSWSAPAGSDVDAFLVACDPSSGG
RGRRVSALLPAGAAAVFSHVLANLEPHNNYTVTLMAVSGERHSAAAVQAIVTMIDRPPEP
AREAAPADRSSVAFRKGIRFNISCDWFSDANGEIKFFSVIVHESQDTSPAKPDPRRSLPP
YEEYARNASVKVYATPPFANRCLRDRLGAFSTQVGAGRADAAWGCADAAGGPCHGGPLRP
NTPYRLSVRAYTALQDVPRGLDEPLFTDTFFSAPILTAPEEFWGPVEGTLAGIALSLLLV
STAALLYWKRKALVPQKRDKPMQLKSPEKTAGSKTQRKTERSPIYLSDFENHLRKLQADS
NYLLSQEFEDLKDVGRQQSQDAALLPENRGKNRYNNVLPYDATRVKLSCFDDDPSSDYIN
ANYIPGCSFRREFVATQGPLPGTKDDFWRMVWEQNVHNVVMVTQCVERGRVKCDHYWPFD
QDPLYYGDLIVQMFSESVLPEWTLREFKIYTEDPSESPRVVRQFHYTVWPDHGVPETAHS
LVGFVRTVRDYTNRSPGGGPTAVHCSAGVGRTGTLIALDRLLQQMDSAGAVDVYGTVRDI
RQHRVLMVQTECQYVFLHQCVLEELRSKKSRSLLGSVAAPVYENIEPRRPDGETRNSFNP
FMIKVFGLDRVYL
NT seq
8142 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgctgatcctgctgtgtctgctactggccgcggtcaacgtgttcgcagacccg
ttccagatgcgcaacgccaagagccccgactgcctgtccacggtcgcgggctccccgcgt
ctctggatggcgaagtgcgacgagcggctgcccgggcagcggtggctgtggctgcctggg
ggtcgcctccgcagccacgccgagggctcctgcctggggtacagcggctcccgcttccac
ctgggccagccggccagcctggtgagctgccggcacgcccccggatggtcgtgcgtgacg
cgcgaccgtgatgcggacctcctagcggtgcgcgaccgctcgctgctgctcagcaagcaa
ggcacgtgggtcgtggtgcggcacttcgagcgcaagtacccgagctcgtggcggcgagca
gagccagggagaagcctcgcctcgctctgtgcagagccacggccgacatacgaggaggag
gaggaggttgaactcaaggtccgggccgagtacaaggtggccctgcccagcgacgaggct
gagctgagcagcaacgagacgagcacgcagagaacgcaacccatccctgtcgccaccgca
gccgcctccccgacaacaaccacaactacaacaacaaccgcaacaactacaacaacaacg
acaccgccaccaacaacaacaacaacggccacaaccacggccgcgtcgaccccaacgccc
cagcccgactgcggcgtccgccacctgacggcggatgtcttcctgcaaggcgcgctgctc
acatggtcagccgtcagccgcggctgctccttcaccgcccgctacgttggggaggatggg
ttcgactctcagctggccgactgcgatggaggaggaggtggagcaggaggaggaagagag
gccgcagcatcggctgctgctgctgccgtccccatgtattcgtgcactctgagtgacctg
cgacctggcagcggctacagagtggacgtgcgcccggcacgaggcgtcgggagcgccgcc
agtctgccgatccgcaccgtgcccgaagccgtgtctcggctgcacgtcctccgcgacgcg
acgacggaacgcagcctcacggtgtcgtggctcccgccgcccggcgccgcccacggctac
gaggtgctcgccgaggccaaggagcccaacggcccccccggccgggccgtcgccgaggtg
gtggaggccgtcgccgccgccgccgccgccctgccgctgtcggccaccgtgggccgcctg
agcccgggcaccagatacgaggtgtccgtgcgggcgcgcgccggggaccgccagggagct
tgggcgcgcgtcgaggccaccacgtgggccccggcggcccgggcacggccctcgtctcgt
gggacccccccgagggccgcgcggaggccctggtggtgcgagcggccgcggcgacggccc
ccttcccggcggggggggtcggggccctcgcgggacagcccctcgctgccgccgtcgacg
cgtcagtgggccctgcgggacgtcacgccgggccgggcctacgccgtgtcggtgcgctcc
ctgctgggcggcggtggcggcgcgcacagcgaggcggtggtcacctaccgcgcagatccg
gcgcccgtcccgcggctcgccgtgaccggaggcccctcgccgggcgagctgagcgtgagc
tgggccgcgacccccggcgacgccgaccgctacgaggtcaccgtacggccggcgaccccg
gacgaagccggcgcggccgtggcggcggtggcggtggtgccgtccccgccagcgccgctg
cgctcgttgtccgtgccggcggcggcggcggccgttggcgacctcagctgccggttccgg
gacctcgagccgggccgcgagtacgcggtgacggtgagcgtcgtgagcggagacgccagt
gccggcagcaccggcagcggcagcgcagcgccggcccccgcgagcgacctggccgtgaac
tcctcgagccgcgaggcctccgtctcctgggtggccgcccgcggccgcgcgtctcgctgc
gagctgagcctgctggccgcggccagcggcgagctcgtctccagccacgccgtgccctgc
cggccggcgcgtgcccgcggtgaccgcggcgacgatgggaaggacgggacggaggaggca
gggcggctgcggttcacggtgcccggcgtgtacccgggacgggcgtaccgcgtgtgcgtg
gacacgcacgcccgcggccaggtggcgagggcgtgcgaggagacgcgcgccgtcccgttg
gccgtctccgatctccgcgtgcacaacgtgagcacgagcggcgtgagcatcgcgtggacg
cggccccactccgacctggacacgtaccgcgtcctcttgcacgcgcccgaggcccaggcg
gacctccggccagcacccgaacgcctcctgcccgagcctcgaggccttccgccgggacgt
gacagcctcgaggcgggacgtccggacctccaatcggaacctcaggaccatcagccgcgg
cgccgagacgtccggctgcagcgtccagacctccagcaaggacgtccagacgtcgagcaa
ggacgttcagacctccagcaaggacgttcagatgtccagcaaggacgttcagacctccag
caaggacgttcagacctccagcaaggaagtccagacctccagcaagggcgtccagacctc
cagccaggccatccagacctccaggcagcacgtcaagatgtccagcaagggcgtcaagaa
gtccagccagaacgccgagaccttcacgagcggacgttgccccgagatgccacggagacg
gtgttccacaacctcacagcggggcgcctctacttcatcctcgtcttcaccatcagtggc
aacctcagcagcttctcatccgtgtcggccaggaccctgccgtccccggtgccggacctg
cgggcggacaacggcggggcggtggactcgctgcgagtgagctggggcccagcggcgggc
gacgtggatggcctgcgcgtctccctgctgcgcgggaagtcgctggtgacggaggcgtcg
ctgccgccgggggcgcgggagcacgccttcggcgggctcgtgccggggggccgctacctg
gtgcaggtggcggcgctcagcgggggccgtgcggccaccgcctccgtgtcggagctcacg
gtccccggcagcgcggtggacgtggcggcgaccaacgcgggccgcggggatctcctccgc
gtctcgtgggcgccgcccgcggtgggcgtcgtggaccggtaccggctgacggtgcgacgc
gccggcggcggcggaggcggcggcgaggccgtctacagccaggagcagccgcgctgggtg
accgagacgtccgtgtggtcgctggtgcccggccgcgtctacaccgtctcggtggagacg
tgcagcgggacatactgcaaccgcagcgacgtggcggcgcagacgcacccggccgcggtg
tcgggcgtgcgcgtggccgagcgacgccaggacggcctgcgcctggcgtggaccgcggcc
gcgggcgacgtcgaccactacgccgtgcgctgggaggccgtgtccaagcggcccggcgcc
accgcgcaagacggcgcgagccgcggcggcgccgctcagctcgccaacgacacgacggag
atcgagctgcggcagctgacaccgggcagcgcctactcggtgaccattgagacctgggcc
ggcgacgcacacagcgacgtcgtcacggaggagcgcaccatgccggcggaggtgcgcaac
ctggcggtgcgcaaccagaacgaggccggcgccggcgccggcctggtggcgtcgtgggtg
cgtcccgccggggactacgacgacttcttggtggcgctgcggcacgagggcgaggcggtg
cgcagcgagacggtggcccgcgacggcaccgggtgcaccttccggcggctgacgccgggc
cgccgctacgcgctcaccgtggtcacccgcagcggcccctacgactcgcccgccgtggcc
tacggcaagacgcagccggctgcggtgtcgcgcctgcgcgtcgaggagcgctccaccgac
cgcctgctgctgcgctgggaccctccggtgggcgacgccgatcgggtggaggtgcggctg
gtggcgtcggtgtcgcccggcggcgtcgacccggcgagcctgcccagctcgtcggacggc
tacgtggcgcgcgagctggcgccggggcgcgtctacaacgcgagcgtcaccacgtggagc
ggccaggagcggcgcaccgcgagcatcgcggcgcagacggaaatgtcctgcaaatcaccc
acttcctcgcgttccccccatttctccacctccctcggtccctcgcgtcgcccgcatctc
cgcgtcgcccacgtctcgacgtcgcccacgtctcgacgtcgcccacgtctccacgtcgcc
cgcatctccacgtcgcccgcatctacacgtcgcccacctcaccacatttcccacgtctcc
acgtcgcccgcatctccacgtcgcccacgtctccacgtcgcccgcatctccacatttccc
acatctccacgtcacccacatctacacgtcgcccacgtctccacgtcgcccgcatctcca
cgtcacccacatctacacgtcgcccacgtctccacgtcgcccacctctccacgtcgccca
catctccatgtcgcccacatctccacgtcgcccacgtctccacatttcccacatctacac
gtcgcccacgtctccgcgccgcgctcagctccgggctccgtgcgggcgctggcggccgtc
gggctggactcgcgctcgctctccgtcacgtggtccccggcgccgggcgacgtcacctcc
tacttggtgtcgctgtggcctccgctcggtggcagcggtggcgggggtggggtcggagcc
gccgggaccaagcgcaacctcacgctgccgcccagcgccaccaatgccaccgtggggcgg
ctggcgccgggccacgagtaccgcgtcgccgtcgccgccgtgagcggcgcgctcagcggg
gagcccgaggtcatcaccggcagaaccgtgccaggcacggtgagcaacctggtggtggac
aaccgctactcgaccgaccttctcatggctcgctggcgcccgtcgcccggcaaggtggac
gcctacctgctgcgcctcaccgacggcaatggctcgctggtggcgaacgcgacggccgag
ccgggcgacgccgagttctccttcccgggcctcgtgccgggctcgccgtaccgcgtcgct
gtcaccgccaccagcggcggagtgagcagcaccgccgtctcagctgaaggcaggaccgtg
ccggcgagcgtgccgtcggtgttcgcggacaacgacggccgcccggcacagctgtcggtg
cggtggcacccatgtcccggcgccgccgagcactacatggtgcagctgctgagtcccaac
gacagcctcatcagcagccagctggtgccggcggcgcgggcccggcacgcctacggcgac
ctcacgccggggcgactctaccgcgtgcgtgtcttcaccgtcagcggcggcctcttcagc
tcggccgccacggcacaggcgcgaacgctgccggcgacggtgaccgggctgcgctcgacc
gacgccaacagcacggactcgctgcgcttcgcgtggacggccgcgtcgggcgaccacgac
ttttacgagatccggctgcacagcgccgacgacaaggcgctgctcgagagcaagctgggc
gcccccgccgtggggggctgggacttcggggggctggctccggggcggctctacacgctc
agcgtcaccacgtacagcgccgagctgatgagcgagacgagcgtgcaggcgcgcacactg
ccccgggccccgttgcgcctctccttccgcaacgtgagcaccacggcggccgagctcgtc
gtcgactacccgtgggtcgccggcgtcgccgacctctccgtggtcgtgcggccgagccac
cccggcctgcgcgtgcggccgcggccgccgggcgccggcggcgcgccgctcgacgctcgc
cgctggctggcggggctggtgccgggccgcggctacgcggtggccgtgcgggcgctgagc
ggcggggtgctgcccacgatcagcgaggcctgccacgggttcgtgcgaaccgtcccgctg
cgtcccgccgccttccactgccgcccggagaactcgacggcactctcgtgctcgtggtcg
gcgccggcgggctccgacgtggacgcgttcctcgtcgcctgcgacccgtcctccggcggc
cgtggtcgccgcgtctcggcgctgctgcccgccggggccgccgcggttttttcccacgtc
ctcgccaacctggagccgcacaacaactacaccgtgacgctgatggccgtatccggggag
cggcacagcgccgccgccgtccaggccatcgtcaccatgatcgatcggccccccgagccg
gcgcgcgaggcggcccccgccgacaggagcagcgtggcgttccgcaaggggatccgcttc
aacatcagctgcgactggttcagcgacgccaacggggagatcaagttcttcagcgtcatc
gtccacgagtcccaggacacgtcgcccgccaagccggatccgcggcgctcgctgccgccg
tacgaggagtacgcgcgcaacgcctccgtcaaggtgtacgccacgccgcccttcgccaac
cgctgcctgcgcgaccgcctcggcgccttctccacgcaggtcggcgccgggcgcgccgac
gccgcctggggctgcgcggacgccgcgggggggccctgccacggggggccgctgcggccc
aacacgccctaccggctgagcgtgagggcctacacggcgctgcaggacgtcccccgaggt
ctcgacgagccgctcttcaccgacacattcttctccgcgcccatcctcaccgcgccagag
gagttctggggcccggtggagggaaccctcgccggcatcgccctctcgctgctgctcgtc
tccaccgccgccctcctctactggaagcgcaaggccctcgtgccgcaaaagcgggacaag
ccgatgcagctgaagtcgcctgagaaaacggcgggctccaagacccaacgcaagaccgag
aggagtcccatctacctgtccgactttgagaatcacctgcgcaagctgcaggccgactcc
aattacctcctctcgcaggagttcgaggatctcaaggacgtggggcggcagcagtcccag
gatgcggcgctcctaccggagaaccgcggcaagaatcgctacaacaacgtactgccctac
gacgcgacgagggttaagctgtcctgcttcgacgacgaccccagctccgactacatcaac
gccaactacatcccgggctgcagcttccggcgcgagttcgtggcgacgcaaggccccctt
cccggaacgaaggacgacttctggaggatggtgtgggagcagaacgtacacaatgtcgtc
atggtgacgcagtgcgtggagcgagggcgggtgaagtgcgaccactactggccgttcgac
caggaccccctgtactacggcgatctcattgtgcagatgttctccgagtctgtgctgcct
gagtggacgctccgcgaattcaagatctacacggaggacccgtcagagagcccgcgcgtg
gtgcggcagttccactacacggtgtggccggaccacggcgtccctgagacggcgcactcc
ctcgtgggctttgtgcgtaccgtgcgcgactacaccaaccgcagccctggcgggggtccg
actgcggtgcactgcagtgccggggtgggccgcactggaacgctcatcgcgctggaccgg
ctgctgcagcagatggacagcgccggggcggtggacgtctacgggacagtgcgggacatc
aggcagcaccgggtgctcatggtgcagacagagtgccagtacgtgttcctgcaccagtgc
gtgctggaggagctccgatccaagaagagccgcagcctcctgggcagtgtagcggctccc
gtctacgagaacatcgagcccagacgcccggacggtgagacgcgcaacagctttaaccca
ttcatgataaaggtttttgggttagatcgcgtttatttataa
DBGET
integrated database retrieval system
