Petromyzon marinus (sea lamprey): 116956443
Help
Entry
116956443 CDS
T09614
Name
(RefSeq) protocadherin-15-like isoform X1
KO
K16505
cadherin-related family member 5
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmrn04515
]
116956443
Cell adhesion molecules [BR:
pmrn04515
]
Cadherins
Cadherin related
116956443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
116956443
NCBI-ProteinID:
XP_032833973
UniProt:
A0AAJ7UFT4
LinkDB
All DBs
Position
65:complement(1879018..1913114)
Genome browser
AA seq
707 aa
AA seq
DB search
MSMIMMMTSLDKGRVPTEAALVRMHWAVRLVLSVWCSSLCRPAQAQVRVLCVPERTFVSV
QENSAGGLLVVAFTVPPPGPASSSSPPLTPRELTWALAGPNSTWFYVDDAGGLRLDARRS
LDAENMTTPVLRVDVTCSHGVEHTEHSILVQVTNLNDNQPRFDRDVYLVDINELSPVDST
FVSVKATDLDGDAIRYVLDPNSNGVEFFTITLPGSGRISLHRPLDFEELTDLRLIVYAEE
FSTTERYRATATVWVTVRDGDDMYPHFLPCRLSGPDGVSQHGPGDAANITGAAVTALSTP
LCLPPTYNATVSQGEIQTSPFVFSPGPILAEDGDKGLNTRITYTIAQEEPGGHVRIDAAT
GNVTLVRAVRDRFQVPQINLQIMAAQVDDPRKFAVAVAVVRVVSLNRWAPAFPGGYEGFV
RESSGDAVPVFTTRESALRVHALDRDFPNGLNPRVEYSLIVPAGARAEWFYVTHEGFVLA
RGDALTLGQSFALEVVATDQESFDVAKTSLNIEVIAQDVNFYRAREMGILSVVLASCLAV
ACAATGLMYYRMRLLGHKADDPLALKESPYVSLTDYRMVAMGAFRPKFRTSHSVEGNGGA
ADGGCHFAPQDQVANPYAAETATAGTPRDARTEAPDVVPPPATEGAAICVASEGGDRGLA
GRGVRFHQDEVASGGAAAAAATPGPGRERKRRGEAASAFFSVSEGAH
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgataatgatgatgacatctcttgacaagggccgggtccccaccgaggctgcg
ctggtcaggatgcactgggctgtgcgtttggttctgtccgtgtggtgctcctcactctgc
cgcccagcgcaggcacaagtgcgcgtgctgtgcgtgcctgagcgcaccttcgtgtcggtg
caagagaacagcgccgggggcctcctcgtcgtggcgttcaccgtgccaccgccgggcccc
gcctcgtcctcttcgccccccctgaccccgcgtgagctcacgtgggccctcgcggggccc
aactccacgtggttctacgtggacgacgccggcggtctgcggctcgatgcgcggcgatcg
ctcgatgcggagaacatgacgaccccggtgctgagggtggacgtgacctgcagccacgga
gtggaacacacagagcactcgatcctcgtgcaggtgaccaacttgaacgacaaccagccc
cggtttgaccgagacgtctacctggtcgacattaacgagctgtctcccgtcgactcgacc
ttcgtgagcgtcaaggccacggacctggatggtgacgccatccgatacgtcctggacccc
aactccaacggagtggaattcttcaccatcactctgcccggcagtggccggatcagcctg
caccggccactcgacttcgaggagctcacggacctgaggctcatcgtctacgccgaggag
ttctccaccacggagcgttaccgcgccaccgccacggtgtgggtgacagtgcgcgacggg
gacgacatgtacccgcacttcctgccgtgccggctatccgggccggacggtgtcagtcag
cacggcccgggagacgcggccaacatcaccggcgccgccgtcacggcgctgtctacgccg
ctctgcctgccgcccacttacaacgcgaccgtcagccagggggagatccagacatcgccg
ttcgtgttcagccccggtccgatcctggcggaggacggagacaagggtctgaacacacgc
atcacctacaccatcgcccaggaggagcctgggggtcacgtgaggatcgacgcagccact
gggaacgtgactctggtccgagcggtgcgcgatcgattccaggttccccagatcaacctc
cagatcatggcggcgcaggtggacgacccgcgcaagttcgcggtggcggtcgcggtggtg
cgcgtggtgtcgctgaatcgctgggcgccggcgttccccggcggctacgaggggttcgtg
cgagagagctcgggcgacgccgtgccggtgttcaccacgcgcgagtcggcgctgcgcgtg
cacgcgctggaccgcgacttccccaatggcctgaacccccgggtggagtactcgctgatc
gtcccggccggagcgcgcgccgaatggttctacgtgactcacgagggcttcgtgctcgct
cgcggagacgcgctcaccctgggccagagcttcgcgctggaggtggtcgccaccgaccag
gaaagcttcgacgtcgcgaaaacctcgctgaacatcgaagtgatcgcgcaggatgtgaac
ttctaccgagcgcgcgagatggggatcctgtcggtggtgctggccagctgcctggccgtg
gcctgtgccgccacgggcctcatgtactaccgcatgcgcctcctgggacacaaggccgac
gatccgctggccctcaaggagagcccctacgtgagcctcacagactacaggatggtggcc
atgggggcattccgcccgaagttccggacgagccactccgtggaggggaacggcggcgcg
gccgacggaggctgccacttcgctccgcaggaccaggtggcaaacccgtacgccgcagaa
acagccacggccgggacgccccgagacgcccgcacggaggccccggacgtggtccctccg
ccggccacggagggtgccgccatctgcgtggcctcggaggggggcgacagggggctggcg
ggccgcggggtgcgcttccaccaggacgaggtggcctctggcggtgccgcggcggcggcg
gcgacaccgggccctggaagggaacgcaagaggcgcggagaagcagcctcggcgttcttc
agcgtcagcgagggcgcgcactga
DBGET
integrated database retrieval system
