Petromyzon marinus (sea lamprey): 116956686
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Entry
116956686 CDS
T09614
Symbol
GTPBP1
Name
(RefSeq) GTP-binding protein 1 isoform X1
KO
K24887
GTP-binding protein 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116956686 (GTPBP1)
03016 Transfer RNA biogenesis [BR:
pmrn03016
]
116956686 (GTPBP1)
03012 Translation factors [BR:
pmrn03012
]
116956686 (GTPBP1)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
116956686 (GTPBP1)
Transfer RNA biogenesis [BR:
pmrn03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
116956686 (GTPBP1)
Translation factors [BR:
pmrn03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
116956686 (GTPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP-eEF1A_C
MMR_HSR1
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
116956686
NCBI-ProteinID:
XP_032834366
UniProt:
A0AAJ7XH86
LinkDB
All DBs
Position
3:20271244..20292268
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AA seq
653 aa
AA seq
DB search
MEFPGSPAEASNLYAPDSGVLETVNGEADSTLASKLALVSPDAEQYERLLQQLRERLSEG
QGETIYVIGQGSDGGEYGLGEDDMVASAATLEGMAGQCDAETVLLRERSEPGGRAREYLV
RRNVADNDFLEVRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEMESGRTS
SVGNDILGFDSAGNVVNKPDAHASGLDWTRICEKSSKVITFIDLAGHEKYLKTTVFGMTG
HLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPPNVLQDTLKLLQRLL
KSPGCRKIPVLVQTRDDVVVTATNFTSERICPIFQISNVSGENLDLLKMFLNLLSARMGF
SEAEPAEFQIDDTYSVPGVGTVVSGTVLRGLIRLNDTLLLGPDPLGAFTAIAVKSIHRKR
MPVREVRGGQTASFALKKIKRAWIRKGMVMVSPRVNPQAYWEFEAEILVLHHPTTISPRY
QAMVHCGSIRQTATILGMSRDCLRTGDKANVHFRFIKSPEFLHPDTRLVFREGRTKAVGT
ITKLISSVNTAPTNMKTQQVKMQPSKKGGFGTNAMAGQHGAASGTPGAAAGDAGAEAGAS
SSLEDATVQVAAQGTQSQGEDADKEKGRGSGKRRGGQRQRGKQASQTAVQVTS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggagtttcccgggtcaccggccgaggccagtaacctgtacgcgccggacagcggcgtg
ctggagacggtcaatggggaggcggactcgacactcgcatcgaagctggcgctggtgagc
cccgatgcagagcagtacgagcgcctactgcagcagctgcgagagcgtctctccgagggc
cagggcgagaccatctacgtcatcgggcagggcagtgatggcggagagtatgggctgggc
gaggacgacatggtggcgtcagcggcgacgctggagggcatggcggggcagtgcgatgcc
gagaccgtgctgctgcgtgagcgctctgagccgggcgggcgagcgcgcgagtacctcgtg
cggcgtaacgtggctgacaacgacttcctggaggtcagggtggcggtggtgggcaacgtg
gacgcggggaagtcgacgctgctgggcgtgctgacccacggtgagctggacaacggccgt
ggtttcgcgcgccagaagctcttccggcacaagcacgagatggaatcagggaggacgagc
agcgttggcaacgacatcctgggtttcgacagcgctggcaacgtggtgaacaagcccgac
gcgcatgccagcggcctcgactggacacgcatctgcgagaagtcgtccaaggtcatcacc
ttcatcgacctggcggggcacgaaaagtacctgaagaccacggtgtttggcatgacgggt
cacctgcccgacttttgcatgctcatggtgggcagtaacgcgggcattgtgggcatgacc
aaggagcacctgggcctcgcgctcgccctcaacgtccccgtgttcgtggtcgtcaccaag
atcgacatgtgcccgcccaacgtgctgcaagacacgctgaagctgctgcagaggctgctg
aagtcgcccggttgccgcaagatcccggtgctggtgcagacgcgggacgacgtggtggtg
actgcgaccaacttcacgtcggagcgcatctgccccatcttccagatctccaacgtgagc
ggcgagaacctggacctgctcaagatgttcctcaacctcctgtcggcgcggatgggcttc
agcgaggccgagcccgctgagttccagatcgacgacacctactccgtgccgggcgtgggc
acggtggtgtcaggcacggtgctccgaggcctcatccgtctcaacgacacgctgctgctg
ggccccgacccgctgggcgccttcacggccatcgccgtcaagagcatccaccgcaagcgc
atgccggtgcgcgaggtgcgcggcgggcagaccgcctccttcgccctcaagaagatcaag
cgcgcgtggatccgcaagggcatggtgatggtgtcaccacgcgtcaaccctcaggcttac
tgggagttcgaggctgagatcctggtcctccaccatccgacgaccatcagcccacgctac
caggccatggtgcactgtgggagcatccggcagacggccacgatcctgggcatgagccgc
gactgcttgcgcacgggcgacaaggccaacgtgcatttccgcttcattaagagccccgag
ttcttgcacccggacacccgcctcgtgttccgggagggccgcacgaaagccgtgggcacc
atcactaaactcatctccagcgtcaacacggcgcccaccaacatgaagacgcagcaggtg
aagatgcagcccagcaagaagggaggcttcggcaccaacgcgatggcggggcagcacgga
gccgcgtcgggcacgccgggggcggccgctggtgatgccggcgccgaggctggagcctcc
tcgtcgttggaggacgcgacagtgcaggtggcggcacagggaacacagtcacaaggagag
gacgcagacaaggagaagggaaggggcagcggcaaacggcggggaggtcaacggcagcga
ggcaagcaggcatcccagacggccgtgcaggtcacctcgtag
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