Petromyzon marinus (sea lamprey): 116956711
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Entry
116956711 CDS
T09614
Name
(RefSeq) LOW QUALITY PROTEIN: SLIT and NTRK-like protein 5
KO
K25833
SLIT and NTRK-like protein 2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116956711
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
116956711
NCBI-ProteinID:
XP_032834372
UniProt:
A0AAJ7UDP0
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Position
67:complement(5112603..5164496)
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AA seq
959 aa
AA seq
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MGAPAALPPFVALRLLLLLLLLALPRWADANAGVVDDGGAVTGSLGIAVAESCPAVCSCE
ERESLLQVDCDNRGLQHVSQLRPQQQPQQPQEQQEPQPTRPYQLHLHGNSIGTLAAGDFH
CCPGAVALDLANNGLLEVAGGAFEGMARLRRLRLHGNKLEALRNGTFAGAEGLDYLQADY
NLLRRVEAAAFRGLARLRVLILNDNLLRRLPAGVFRGVPLRHLDLRGNRLKALAYGGLLE
HLRGVAEIRLEENPWECSCGLWALKEWLEVLAAGPPPPPAALVGEAVCESPFRLHGKGLM
ELSRRDVCAGGDDGGGDDDDEGGDDEGPRPRPTPAGAAKPRLSVTTTTMPAPASFAGKPH
PKPPKPTAAYDRGKGAGDRNASLLLAAAAAVTATNMGPMAAVAGGAAAAGGGGHRQAKPP
APTSCPSVCSCAVHAADGGLAVDCQGRGIERVSALRPRPLGPRRLSLRANSIREVLAHDF
RDLGTLELLHLGANRISAVRDGAFLGLSRLRRLHLDGNALRSLSAGAFAGLGALQFLYLE
SNAIVEVHAGAFAATAALQLLFLNRNRLRRLPAGLLAAATGVTRLNLRGNRLRGLPADGL
LAPLGASAVQVDLRDNPWECDCAAEPLRRWLASLSTGIMQGAVACAGPPALAHRDLRSVP
LDELCAGDRPAEEAASTAGTAAAPPPAALPPTPAPAHGSLGVPLSVLILGLLAALVTAVA
LLAALLRRRGAASRPPAADAVAGRADAGVVSAAFDYGRYEAKAAEAAAQAAEAKGASAPG
QNRRRGGGPSIYTVPLRAGDPDRQYRQVPLGEGSAAGPAWAPHEHSRCPGAPALRYYTLD
HRRRRRRQQYDGAGCGAADASYLGGQAAGRAPHASFQFRSLSRLGRLQQQQRQRQQQQQQ
PNYDLGKRPSQAAHPSVPLGFRAEGAVHAAGECLELNARLRAEPDYLHVLERQSPYEQF
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgggggccccggccgctctgccgcccttcgtggccctccgcctcctcctgctgctgctg
ctgctggcactgccacggtgggcagatgccaacgccggcgttgtcgacgacggcggcgcc
gtcacaggcagcttgggcattgccgtcgcagagtcctgcccagctgtgtgcagctgcgag
gagagggagtcgctcctgcaggtcgactgcgacaaccgcggcctgcagcacgtgtcgcag
ctgcgcccgcaacagcagccgcagcagccgcaggagcagcaggagccacagcccacccga
ccgtaccagctgcacctgcatggcaactcgatcggcacgctggccgccggcgacttccac
tgctgcccgggcgccgtcgccctcgacctggccaacaacggcctgctggaggtcgcgggc
ggcgccttcgagggcatggcccgcctgcgccgcctccgcctccacggcaacaagctggag
gccctccgcaacggcacgttcgccggtgccgagggcctcgactacttgcaggccgactac
aacctcctgcggcgggtggaggcggcggccttccggggcctcgcccgcctccgggtgctc
atcctcaacgacaacctcctgcggcggctgcccgcgggcgtcttccgcggcgtgcccctg
cgccacctcgacctgcggggcaaccgcctcaaggcgctggcctacgggggactcctggag
cacctgcgcggcgtcgccgagatccggctcgaggagaacccctgggagtgctcgtgcggc
ctgtgggccctcaaggagtggctcgaggtgctggccgcggggccgccgccgccccccgcc
gccctcgtcggcgaggcggtgtgcgagtcgcccttccggctgcatggcaagggcctgatg
gagctgtcgcgccgagacgtctgcgcgggcggcgacgacggcggcggcgacgacgacgac
gaagggggcgacgacgaagggccacggccgcgccccaccccggccggcgcggccaagccg
cgcctctccgtcaccaccaccaccatgccggcgccggcatcgttcgccggcaagccgcac
cccaagccgccgaagcccacggcggcgtacgatcgcgggaagggcgcgggcgaccgcaac
gcgtcgctgttgctggcggcggccgccgccgtcaccgccaccaacatgggccccatggcg
gcggtggcgggaggggcggcggcggcgggggggggcggccaccgccaggccaagccgccg
gctccgacgagctgtcccagcgtgtgctcgtgcgcggtgcacgcggccgacggggggctc
gccgtcgactgccagggccgtggcatcgagcgcgtctcggccctgcggccccgcccgctg
gggccccggaggctctcgctgcgcgccaacagcatccgcgaggtgctcgcccacgacttc
cgcgacctcggcaccctcgagctcctccacctgggcgccaaccggatttcggccgtccgc
gacggcgccttcctgggcctgtcgcgcctgcggcggctccacctcgacggcaacgccctg
cgcagcctctcggcgggcgccttcgccggcctcggcgcccttcagttcctctacctggag
tccaacgccatcgtggaggtgcacgccggcgcgttcgccgccaccgccgccctgcagctc
ctcttcctcaaccgcaaccgcctgcgccgcctgccggcgggcctcctcgccgccgccacc
ggcgtgacgaggctcaacctgcgcggcaaccgcctgcgcgggctgcccgccgacggcctc
ctggccccgctcggcgcctctgcggtgcaggtggacctgcgggacaacccgtgggagtgc
gactgcgccgccgagcccctgcgccgctggctcgcctccctgagcacgggcatcatgcag
ggcgccgtcgcgtgcgcgggccccccggcgctagcccaccgcgacctgcgctccgtgcca
ctcgacgagctgtgcgccggcgatcgccccgccgaggaggccgcttcgacggccggcacg
gccgcggccccgccgcccgccgccctccctccgacaccggcgccggcgcacggctccctc
ggcgtgccgctctccgtgctcatcttgggcctgctcgccgctctcgtcaccgccgtggcg
ctgctcgcggccctcttgcggcgccgcggggcggcctcccgcccgccggcggccgacgcc
gtcgccggccgcgccgacgccggcgtggtgtcggcggcgttcgactacggccgctacgag
gcgaaggcggcagaggcggccgcgcaggcggccgaggccaagggggcatccgcgccgggg
cagaatcggcggcggggtggcggcccctccatttacacggtgccgctgcgcgccggcgac
cccgaccgccagtaccgtcaggtgccgctcggcgaagggagcgcagccggcccggcttgg
gcgccgcacgagcacagccgctgccccggcgcgccggccctgcggtactacacgctggac
caccgccggcgtcggcggcggcagcagtacgacggcgccggatgtggtgcggccgacgcg
tcgtacctcggcggccaggccgccggcagggcccctcacgccagcttccagttccgcagc
ctcagcaggctgggccggttgcagcagcagcagcggcagcggcagcagcagcagcagcag
ccaaactacgacttgggcaaacgcccgtcgcaggcggcgcatccgtcggtgccgctgggg
ttccgagcggagggtgcggtgcacgccgccggcgagtgcctggagctgaacgcgaggctg
cgtgccgagcccgactacctgcacgtgctggagaggcagtctccatacgaacagttctaa
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