Petromyzon marinus (sea lamprey): 116956783
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Entry
116956783 CDS
T09614
Symbol
TBL3
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116956783 (TBL3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmrn03009
]
116956783 (TBL3)
Ribosome biogenesis [BR:
pmrn03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116956783 (TBL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Utp13
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_Aladin
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_IP5PC_F
WDR54
UTP15_C
Beta-prop_pof12
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
116956783
NCBI-ProteinID:
XP_032834500
UniProt:
A0AAJ7XHG7
LinkDB
All DBs
Position
3:20673422..20690658
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AA seq
949 aa
AA seq
DB search
MAEEKPLQLKDNYTVSYKFEPFYSGGKVQFSGDGQRLLCTCGTKVQVLDVSTGKVMHTIA
QEDEEDVTCFVLSPDDEVMVTASRAMLLRQWAWRDAAVCQRTWKAVHVAPIVSMAFDATS
TLLATGSSDATIKVWDIVKQYCTHNFRGSSGVVGVVAFHPDTSCPRVLSAASDCKIRVWD
LQSGACSATLDGHYSAVTALRFACDGRTLLSAGRDSVVLLWELEAGVVRKTVPVYEPLED
LVVLPEEGDQSALGVEGKGIHFVTAGSKGTLRVWDAANARCVFTAPPPEAGSPGDDAAAA
AASAGPGDGAERTIVQAHLVPALGQIAAVTSDHNIILHALGGLTVAKQFVGYNDEVLDVK
FLGKTDSHVAVATNSAQIKIFQLDSSHCQLLHGHRDMVLALDVSRRGTMLASSSKDRTVR
VWSMEEASGHVRCVAVATGHAHAVGAVAWSRLKDGFLVSGSQDCTLKLWDLPKGLSSSGT
ATTALTCRFTEKAHDKDVNSVAVSPNDRLVASGSQDHTVRLWAVAAKKKKEEEGGGGVGP
VAVLRGHRRGVWAVAFSPMDQVVASASADGSVRLWGLHDFACLKTFEGHDASVLKVVFVA
RGTQLLTSGSDGLVKLWTIKTNECVRTLDAHDGKVWGLHGSRDDERVLTGGSDACIVLWK
DVTQEEQEEERKKEEEQLLKRQELSNLLHEKKYLKALRLAISLDQPHTTLTVIQAILDET
GGREDLEATIAKLRQDQKESLLKFAVTWNTNSRSCHEAHAVLATLFRHVPPGDLLRFANV
QPAVEALLPYSERHFQRMGRLLQAAMFVDYTWRSMRLLSDFKSTDAMEVDGVDAARPSFR
VDKIGARPPSGNAGTADASDGSVSGFESESESSDDDDCKATEVPRTRRGKATPAPKSSSE
DSGSESELSEEDEEKEQPCSTSDEDSAALGFEAKPQTKVAGRVTRAHHC
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggagaaacccttgcagctcaaagacaattacacggtctcctacaagttcgag
cccttttactctggaggcaaagtgcagttcagcggcgatggacagcgcctgctgtgcacc
tgcggcaccaaggtgcaggtgctggacgtgagcacgggcaaagtgatgcacaccatcgcc
caggaggatgaggaggacgtcacgtgcttcgtgttgagcccggacgatgaggtgatggta
acggcgagccgggcgatgttgctgcggcagtgggcgtggcgcgacgccgcggtgtgccag
cgcacgtggaaggccgtccacgtggcccccatcgtcagcatggccttcgacgccacctcc
acactgctggccaccgggagcagcgatgccaccatcaaggtgtgggacatcgtcaagcag
tactgtacccacaacttccgcggctcgtcgggtgtcgtcggcgtggtggcgttccacccg
gacacgtcgtgcccccgcgttctctccgccgcctccgactgcaagatccgcgtgtgggac
ctgcagagtggtgcctgcagcgccaccctcgacggccactacagcgccgtcaccgccctg
cgcttcgcctgcgacgggcgcacgctgctcagtgccgggagggacagcgtcgtgctgctc
tgggagctggaggccggcgttgtgcggaaaacggtgcccgtgtacgagcccctggaggac
ctggtggttctgcctgaggagggcgatcaatcggcactgggagtggaggggaagggcatc
cacttcgtcaccgcgggcagcaaaggcacgctgcgcgtgtgggacgcggcgaatgcgcgc
tgcgtcttcacggcgccaccgcccgaggccggctcgccaggggacgacgccgcagcagcg
gctgcgagcgccgggcccggcgacggcgcggagcgaacgatcgtgcaggctcacctcgtg
ccggcgctcgggcaaatcgcggccgtcacctccgaccacaacatcatcctgcacgcgctg
ggagggctgaccgtcgcaaagcagttcgtgggctacaacgacgaggtgctggacgtgaag
ttcttgggcaagacggactcccacgtggcggtggcgaccaacagcgcccagatcaaaatc
ttccagcttgacagttcccactgccagctgctgcacgggcacagggacatggtgctggcg
ctggacgtatcgcgaaggggcacgatgctcgccagcagctccaaggaccgcacggtgcgc
gtgtggagcatggaggaggcgagcgggcacgtgcgctgcgtcgccgtggcgacgggacac
gctcacgcggtcggggccgtcgcctggtccaggctgaaggatggcttcctggtgagcggg
agccaggactgcaccctgaagctgtgggacctccccaagggtctctcgtccagcggcacc
gccaccaccgccctcacctgccgcttcacggagaaggcgcacgacaaggacgtgaacagc
gtggcggtctcccccaacgaccggctggtggcgagcggctcccaggaccacacggtgcgg
ctgtgggcggtggcggcgaagaagaagaaggaggaggagggggggggcggtgttggcccc
gtggcggtgctgcggggccaccgtcgcggcgtctgggccgtcgccttctcccccatggac
caggtcgtcgcctccgcctccgccgacggctccgtgcggctctgggggctgcacgacttt
gcctgcctcaagacgtttgaaggtcacgatgcgtcggtgctcaaggtcgtgttcgtggcg
cgagggacgcagctcctgacgagcggctcggacggcctcgtgaagctctggacgatcaag
accaacgagtgcgtgcgcacgctcgacgcgcacgacgggaaagtctggggcctccacggc
agccgcgacgacgagcgtgtgctcaccggcgggagcgacgcctgcatcgtgctgtggaag
gacgtgacgcaggaggagcaggaggaggagcggaagaaggaggaggagcagctgctgaag
agacaggaactttcgaacttgctgcacgaaaagaaatacctgaaggctctccgcctcgcc
atctccctcgatcagccccacacgacactgaccgtcatccaagcgatcctggatgagacg
ggaggacgagaggacctggaggccaccatcgccaagctgagacaggaccagaaagagtcg
ctgctcaagttcgccgtgacgtggaacacgaactctcgcagctgccacgaggcgcacgcc
gtgctcgccacgctcttccggcacgtgccgcccggcgacctcctgcgcttcgccaacgtg
cagcccgccgtcgaggcgctgctgccctacagcgagcgacacttccagaggatggggcgg
ctcctacaggccgccatgtttgtggactacacctggaggagcatgcggctcttgtccgac
ttcaagagcacggatgccatggaggtggacggggtggacgccgctcggccgagcttcagg
gtagacaaaatcggagctcgacctccgagcggcaacgctggcaccgccgatgccagcgac
ggctctgtgtccgggttcgagtcggagtccgaatcgtcggacgatgatgattgcaaggcc
acggaggtgcccaggacaagacgcggcaaggcaactcccgcaccaaaatccagcagcgag
gattccggatcagagtcggagttgagtgaagaagatgaggagaaagaacagccatgctcc
actagtgacgaggactcagctgctctgggttttgaggcaaaaccgcaaacgaaagtggcg
gggagggtgactcgcgcgcaccattgctaa
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