KEGG   Petromyzon marinus (sea lamprey): 116956783
Entry
116956783         CDS       T09614                                 
Symbol
TBL3
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    116956783 (TBL3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pmrn03009]
    116956783 (TBL3)
Ribosome biogenesis [BR:pmrn03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    116956783 (TBL3)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Utp13 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_SCAP ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_Aladin NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 PEP5_VPS11_N Beta-prop_IP5PC_F WDR54 UTP15_C Beta-prop_pof12 Cytochrom_D1
Other DBs
NCBI-GeneID: 116956783
NCBI-ProteinID: XP_032834500
UniProt: A0AAJ7XHG7
LinkDB
Position
3:20673422..20690658
AA seq 949 aa
MAEEKPLQLKDNYTVSYKFEPFYSGGKVQFSGDGQRLLCTCGTKVQVLDVSTGKVMHTIA
QEDEEDVTCFVLSPDDEVMVTASRAMLLRQWAWRDAAVCQRTWKAVHVAPIVSMAFDATS
TLLATGSSDATIKVWDIVKQYCTHNFRGSSGVVGVVAFHPDTSCPRVLSAASDCKIRVWD
LQSGACSATLDGHYSAVTALRFACDGRTLLSAGRDSVVLLWELEAGVVRKTVPVYEPLED
LVVLPEEGDQSALGVEGKGIHFVTAGSKGTLRVWDAANARCVFTAPPPEAGSPGDDAAAA
AASAGPGDGAERTIVQAHLVPALGQIAAVTSDHNIILHALGGLTVAKQFVGYNDEVLDVK
FLGKTDSHVAVATNSAQIKIFQLDSSHCQLLHGHRDMVLALDVSRRGTMLASSSKDRTVR
VWSMEEASGHVRCVAVATGHAHAVGAVAWSRLKDGFLVSGSQDCTLKLWDLPKGLSSSGT
ATTALTCRFTEKAHDKDVNSVAVSPNDRLVASGSQDHTVRLWAVAAKKKKEEEGGGGVGP
VAVLRGHRRGVWAVAFSPMDQVVASASADGSVRLWGLHDFACLKTFEGHDASVLKVVFVA
RGTQLLTSGSDGLVKLWTIKTNECVRTLDAHDGKVWGLHGSRDDERVLTGGSDACIVLWK
DVTQEEQEEERKKEEEQLLKRQELSNLLHEKKYLKALRLAISLDQPHTTLTVIQAILDET
GGREDLEATIAKLRQDQKESLLKFAVTWNTNSRSCHEAHAVLATLFRHVPPGDLLRFANV
QPAVEALLPYSERHFQRMGRLLQAAMFVDYTWRSMRLLSDFKSTDAMEVDGVDAARPSFR
VDKIGARPPSGNAGTADASDGSVSGFESESESSDDDDCKATEVPRTRRGKATPAPKSSSE
DSGSESELSEEDEEKEQPCSTSDEDSAALGFEAKPQTKVAGRVTRAHHC
NT seq 2850 nt   +upstreamnt  +downstreamnt
atggccgaggagaaacccttgcagctcaaagacaattacacggtctcctacaagttcgag
cccttttactctggaggcaaagtgcagttcagcggcgatggacagcgcctgctgtgcacc
tgcggcaccaaggtgcaggtgctggacgtgagcacgggcaaagtgatgcacaccatcgcc
caggaggatgaggaggacgtcacgtgcttcgtgttgagcccggacgatgaggtgatggta
acggcgagccgggcgatgttgctgcggcagtgggcgtggcgcgacgccgcggtgtgccag
cgcacgtggaaggccgtccacgtggcccccatcgtcagcatggccttcgacgccacctcc
acactgctggccaccgggagcagcgatgccaccatcaaggtgtgggacatcgtcaagcag
tactgtacccacaacttccgcggctcgtcgggtgtcgtcggcgtggtggcgttccacccg
gacacgtcgtgcccccgcgttctctccgccgcctccgactgcaagatccgcgtgtgggac
ctgcagagtggtgcctgcagcgccaccctcgacggccactacagcgccgtcaccgccctg
cgcttcgcctgcgacgggcgcacgctgctcagtgccgggagggacagcgtcgtgctgctc
tgggagctggaggccggcgttgtgcggaaaacggtgcccgtgtacgagcccctggaggac
ctggtggttctgcctgaggagggcgatcaatcggcactgggagtggaggggaagggcatc
cacttcgtcaccgcgggcagcaaaggcacgctgcgcgtgtgggacgcggcgaatgcgcgc
tgcgtcttcacggcgccaccgcccgaggccggctcgccaggggacgacgccgcagcagcg
gctgcgagcgccgggcccggcgacggcgcggagcgaacgatcgtgcaggctcacctcgtg
ccggcgctcgggcaaatcgcggccgtcacctccgaccacaacatcatcctgcacgcgctg
ggagggctgaccgtcgcaaagcagttcgtgggctacaacgacgaggtgctggacgtgaag
ttcttgggcaagacggactcccacgtggcggtggcgaccaacagcgcccagatcaaaatc
ttccagcttgacagttcccactgccagctgctgcacgggcacagggacatggtgctggcg
ctggacgtatcgcgaaggggcacgatgctcgccagcagctccaaggaccgcacggtgcgc
gtgtggagcatggaggaggcgagcgggcacgtgcgctgcgtcgccgtggcgacgggacac
gctcacgcggtcggggccgtcgcctggtccaggctgaaggatggcttcctggtgagcggg
agccaggactgcaccctgaagctgtgggacctccccaagggtctctcgtccagcggcacc
gccaccaccgccctcacctgccgcttcacggagaaggcgcacgacaaggacgtgaacagc
gtggcggtctcccccaacgaccggctggtggcgagcggctcccaggaccacacggtgcgg
ctgtgggcggtggcggcgaagaagaagaaggaggaggagggggggggcggtgttggcccc
gtggcggtgctgcggggccaccgtcgcggcgtctgggccgtcgccttctcccccatggac
caggtcgtcgcctccgcctccgccgacggctccgtgcggctctgggggctgcacgacttt
gcctgcctcaagacgtttgaaggtcacgatgcgtcggtgctcaaggtcgtgttcgtggcg
cgagggacgcagctcctgacgagcggctcggacggcctcgtgaagctctggacgatcaag
accaacgagtgcgtgcgcacgctcgacgcgcacgacgggaaagtctggggcctccacggc
agccgcgacgacgagcgtgtgctcaccggcgggagcgacgcctgcatcgtgctgtggaag
gacgtgacgcaggaggagcaggaggaggagcggaagaaggaggaggagcagctgctgaag
agacaggaactttcgaacttgctgcacgaaaagaaatacctgaaggctctccgcctcgcc
atctccctcgatcagccccacacgacactgaccgtcatccaagcgatcctggatgagacg
ggaggacgagaggacctggaggccaccatcgccaagctgagacaggaccagaaagagtcg
ctgctcaagttcgccgtgacgtggaacacgaactctcgcagctgccacgaggcgcacgcc
gtgctcgccacgctcttccggcacgtgccgcccggcgacctcctgcgcttcgccaacgtg
cagcccgccgtcgaggcgctgctgccctacagcgagcgacacttccagaggatggggcgg
ctcctacaggccgccatgtttgtggactacacctggaggagcatgcggctcttgtccgac
ttcaagagcacggatgccatggaggtggacggggtggacgccgctcggccgagcttcagg
gtagacaaaatcggagctcgacctccgagcggcaacgctggcaccgccgatgccagcgac
ggctctgtgtccgggttcgagtcggagtccgaatcgtcggacgatgatgattgcaaggcc
acggaggtgcccaggacaagacgcggcaaggcaactcccgcaccaaaatccagcagcgag
gattccggatcagagtcggagttgagtgaagaagatgaggagaaagaacagccatgctcc
actagtgacgaggactcagctgctctgggttttgaggcaaaaccgcaaacgaaagtggcg
gggagggtgactcgcgcgcaccattgctaa

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