Petromyzon marinus (sea lamprey): 116956814
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Entry
116956814 CDS
T09614
Name
(RefSeq) rho guanine nucleotide exchange factor 4-like
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116956814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116956814
Membrane trafficking [BR:
pmrn04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116956814
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_2
CSNKA2IP
F37A46
PBP1_TM
SH3_3
Motif
Other DBs
NCBI-GeneID:
116956814
NCBI-ProteinID:
XP_032834545
LinkDB
All DBs
Position
67:252619..280714
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AA seq
750 aa
AA seq
DB search
MDLTDGDAALPSTDGSASEAADWANGEASSPSTGGNAAGAKDSALTLANGTAVGTMGLAN
EAAALSLTNGSAASAARSTNGGVAGGARVASARLRPLSRSTPVGLDHVGGRGVGSKGVLA
DSSPTHHDHHHDDDDDDDDEDDDDDDEEEEELDAIAAVRSGGHAARGPPFHFSVPGAGGG
EQMVVSKLLAEGVAVRAESLWDRVSLRHDELALSAGEEVEVLEAPGVGGGGGGGAVGGGW
WWWWCRARDGRLGWVPAAFLRLRVNQEEEEGEGPAPPLGPPPPPLPGAASGASAASPHLP
PTSSSTSSASASSSSTPHADEMRSRVVREIFDTEKHYLAQLGDICEGYLLQCRRRPDLFT
AEQLGLIFGNVEQIVAFQARFLGALRRRFVATSPHNTCVGAVFLQHREGFRVYSAYCNNH
PRACAELARLAQLGRYGHFFEACRLLRGMIHIALGGFLLAPVQKICKYPLQLAELLKYTP
PEHGDFVSVAAALEAMRGVALLINERKRRLESIEHIAGWQRGIVEWQGTDVLERSSLLIH
SGELVMQSASRPRPQLRVFFLFDHQLVYCKKDLLRKDMLHYRGRFPTDGLAVEDVPDGKS
EELQVCVRHALRISAGALSEPLLLSARKESDKAQWLVAFERETSAVADGDKELGFVLTDA
QRAQAMEDALKTVQRSKPRGLTHSQSVRHRRCAARSAAPPAPSAASSSSSSSSSSSSSAT
STVAPSPAAPLKRKPSAFWANLGRLAPFRK
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaccgacggggacgcggctttgccgtcgacggacggcagcgcttcggaggca
gcggattgggccaacggggaggcgtcctcgccgtcgacgggcgggaacgccgcgggggcg
aaggattcggctttgacgttggccaatggcacagccgtcgggaccatgggcttggccaat
gaggcggcagctttgtcgctgaccaacgggagcgcggcgtcggcggcacgatcgaccaat
ggcggcgtggcgggtggcgccagggtggcgtcggcacggttacggccgttgtcaagaagt
actcctgtgggcctggaccacgttgggggaaggggcgtgggcagtaagggagttctggct
gacagctctcccacccaccacgaccaccaccatgacgacgacgatgatgatgacgatgaa
gatgacgatgatgacgacgaggaggaggaggagttggatgcgatcgcggccgtgcggagt
ggggggcacgcagcgcgggggccccccttccacttcagtgtcccaggcgcgggaggaggg
gagcagatggtggtgagcaagctgttggcggagggtgtggcggtgcgtgccgagtcgctg
tgggaccgtgtgtcgctgcgccacgatgagttggcgctctccgccggagaggaggtggag
gtgctggaggcgcccggcgtgggaggaggcggtggtggcggtgcggtggggggcggctgg
tggtggtggtggtgccgggcgcgcgacggccgccttggctgggtgccggcggccttcctg
cggctccgcgtgaaccaagaggaggaggagggggaggggccggcacctccccttggaccg
ccgccaccgccgctgccgggcgccgcgagcggagcgtcggcagcctccccgcatctcccc
cccacctcctcctccacctcctctgcctccgcctcgtcctcgtcgacgccgcacgccgac
gagatgaggtcgagggtggtgcgtgagatcttcgacacggagaagcactacctcgctcag
ctgggcgacatctgtgagggctacctgctgcagtgccgccgccggccggacttgttcacc
gcggagcagctgggcctcatcttcggcaacgtggagcagatcgtcgccttccaggcgcgc
ttcctcggcgcgctccggcgacgcttcgtggcgacctcgccgcacaacacctgcgtcggc
gccgtcttcctgcagcaccgagagggattccgcgtctactccgcgtactgcaacaaccac
ccgcgggcgtgcgccgagttggcgagactcgcccagctgggccgctacggccacttcttc
gaggcgtgccgcctgctgcgtgggatgatccacatcgccctgggcggcttcctgctggcg
cccgtgcagaagatctgcaagtaccccctgcagctcgctgagctgctcaagtacacgccg
ccggagcacggcgactttgtgagcgtggccgccgcgctggaggccatgaggggcgtcgcg
ctcctcatcaacgagcgcaagcggcgcttggagagcatcgagcacatcgctggctggcag
aggggcatcgttgagtggcagggcacggacgtgctggagcggagctcgttgctgatccac
tccggggagttggtgatgcagtccgcatcccggcccaggccccagctccgcgttttcttt
ctcttcgaccaccagctcgtgtactgcaagaaggacttgctgaggaaggacatgctgcac
taccgcggacgctttcccaccgacggactcgcggtggaggacgtcccggacggcaagagc
gaggagctccaggtgtgtgtgcgacacgccctgcgtatttcggctggcgccctctccgag
ccgctgctgctgagcgcccgcaaggagagcgacaaggcccagtggctggtcgccttcgag
cgcgagaccagcgccgtggcagacggagacaaggaactggggttcgtgctgaccgacgcg
cagagagcccaggcgatggaggacgcgctgaagacggtgcagaggagcaagcccagagga
ctgacgcactcgcagtccgtccgccaccgccgctgtgccgcccgcagcgccgcgccgccc
gcaccttcggcggcctcctcctcatcatcctcctcatcctcctcctcatcctccgccacg
tccacggtcgccccctctcccgccgcgcccctcaagcgcaaaccctcggcattctgggcc
aacctcggcaggttggcgcccttccgaaagtga
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