Petromyzon marinus (sea lamprey): 116956911
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Entry
116956911 CDS
T09614
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmrn03009
]
116956911
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116956911
Enzymes [BR:
pmrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116956911
Ribosome biogenesis [BR:
pmrn03009
]
Eukaryotic type
Pre-60S particles
Helicases
116956911
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
116956911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
116956911
NCBI-ProteinID:
XP_032834687
UniProt:
A0AAJ7UE94
LinkDB
All DBs
Position
68:427425..478418
Genome browser
AA seq
829 aa
AA seq
DB search
MPGKIFAELEGTTAAPTTEPKKVKGEKRRRQKGGDAETTMEEEKEKETPEEVKRAKKAKK
RERRQEEEEETQTIPEKSPKKKKKRKSEESEEAQVVEEVEVEPKKPKSSSKKRKLPPTSP
PSPASTKGEEAPLSAASISSTTSSLSGEEVEAGGNAEVLSEEQIAGAFSNFNISDKTISL
LRGRGVSYLFPVQCLSLEPIMAGWDLVAQARTGTGKTLAFAIPLVELLRQRHGTGSAAKY
GRLPQVLVMCPTRELAVQVADDLRAIAAPLRVACFYGGTAYGPQLQQIRSGLDVLVGTPG
RLRDLIQNHGLRLRAKHNNEEEDSSKKKKDEEVVVVEEVEKDEKKGGKKNGGKEEGVRHV
VLDEVDQMLDMGFADQVEEILGCIYSKASPENNPQTLLFSATCPPWVFKVAQKFMKETWR
RVDLMGTEKTRAATTVQHLAVCCPRSERAVCLGSVLRVYAAGLPGGHAVNPVGSSGGHGV
ASVGSSRGRAIVFCETKKEAAELALSPAIAQEAQCLHGDVPQQQREACLRAFRSGAIRVL
VATDVAARGLDVPEVELVVQCQPPHDVESYIHRSGRTGRAGRTGISICFYQERDAGTLRA
IESKAGFVFKRIAVPSANEVLAASTQDVIRSLESVSARVVSRFRLSVEKLLSHRDPWELL
SAALSLLAGYDGDDNRSLLTSLKGYTTLILRSSVPLSHSSAAWRALKEELGEQRAEEMVR
GMRLLKGKTGVCFDVPENKVEEMKAAWPPSKRWNLEEADERPDLEEINFTAGGGGGGGRW
RAREGFCLATIAGGFSLQSATGAIPGTNQQQLCATSPLISISGVAGPTP
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggaagatcttcgccgagctggagggtactacggcggcgcccacgacggagccg
aagaaggtgaagggagaaaaacggcggaggcagaagggaggagacgcagagaccacgatg
gaggaggagaaagagaaggaaacaccggaggaggtgaagagagcgaagaaggcaaagaag
agagagagacgccaggaggaggaggaggagacacagaccatccctgagaagtctccaaag
aaaaagaagaagagaaagagcgaggagagtgaagaagcacaggttgttgaggaggttgag
gtggagccgaagaaacccaaatcctcatccaagaaacggaagctccctcccacctcccct
ccttcccccgcaagcacaaagggagaggaggcccccctctccgccgcctccatctcctcc
accacctcctcgctctccggcgaagaggtggaggcgggaggcaacgcggaggttctctct
gaggagcagattgccggagcgttctccaacttcaacatctctgataaaaccatctccctc
ctgcgcggccgtggggtgtcttatctgttccccgtgcagtgcctctccctggagcccatc
atggccggctgggacctggtggcccaagcccgaacgggaaccggcaagacgctggccttc
gccatccccctggtggagctgctgcggcagagacacgggacgggcagcgcagccaaatac
ggccggctcccacaggtgctggtgatgtgccccacgagggagttagccgtgcaggtggcc
gacgacctccgagccatcgcggcccctctacgcgtggcctgcttctacgggggcacggcc
tacgggccccaactgcagcagatccgttctgggctggacgtgcttgtgggcacgccgggc
cgactgcgcgatctcatccagaaccacggcctgaggctccgcgcgaagcacaacaacgaa
gaggaggactccagcaagaagaagaaggatgaggaggtggtggtggtggaggaggtggag
aaggacgagaagaaggggggaaagaagaatggagggaaggaggagggagtacgccacgtg
gtgctggacgaggtggaccagatgctggacatgggctttgccgatcaggtggaggagatc
ctgggatgcatctacagcaaggcatccccagaaaacaacccacagactctgctcttctca
gccacgtgccctccctgggtgttcaaggtcgcccagaagttcatgaaggagacgtggaga
cgtgtggacctcatgggcactgagaagacccgagcagccaccacggtgcagcacctggcc
gtgtgctgcccacgctcggagcgtgccgtctgcctgggctccgtgctgcgggtgtacgct
gcagggttaccgggaggtcacgcggtcaaccccgtggggtcatcgggaggtcacggggtc
gcctccgtggggtcatcgcgaggtcgcgccatcgtcttctgcgagaccaagaaggaggcg
gccgagctcgcgctcagcccggccattgcgcaggaggctcagtgtctgcacggtgacgta
ccacagcagcagagggaggcgtgtctgcgcgcgttccgctccggtgccatccgcgttctg
gtggccaccgacgtggcggctcgcggcctcgacgtgccggaggtggagctcgtggtgcag
tgccagcccccgcacgatgtggagtcttacatccatcgtagtgggcgcactgggagagcc
ggcaggactgggatttccatctgcttctaccaggagagagacgccggaaccctgagggca
atagagagcaaggcgggcttcgtgttcaagagaatcgccgttccctcggccaatgaggtc
ctcgctgcgtctacacaggacgtcatcaggtccctggagtctgtctctgctcgtgtcgtc
tcgcgcttccgcttgtctgtggagaagctgctgtcccacagagacccctgggagctgctg
tcggctgctctctccctgctcgcggggtacgacggagacgacaacaggtccctgctcacc
tccctcaagggctacacgacgctgattctccgatcctcagttcccctgtcccactcctct
gcggcgtggagagccctcaaggaggagctgggagagcagcgcgccgaggagatggtgcgc
gggatgaggctcctcaagggaaagacgggagtttgctttgacgtcccagagaacaaagtg
gaggagatgaaggctgcgtggcctccgtccaagcgatggaacctggaggaggcggacgag
cggccggatttggaggaaatcaacttcacggccggagggggaggaggaggggggaggtgg
agggccagggagggcttctgcttggccacgattgctggaggcttctctcttcagagtgcg
acgggcgccatcccaggcaccaaccagcagcagctctgcgcgacgagcccgcttataagc
atctccggcgtggccgggcccacaccctga
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