Petromyzon marinus (sea lamprey): 116956923
Help
Entry
116956923 CDS
T09614
Name
(RefSeq) chitin synthase chs-2-like
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00520
Amino sugar and nucleotide sugar metabolism
pmrn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
116956923
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pmrn01003
]
116956923
Enzymes [BR:
pmrn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
116956923
Glycosyltransferases [BR:
pmrn01003
]
Polysaccharide
Structural polysaccharide
116956923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
Glyco_trans_2_3
Glyco_tranf_2_3
Glyco_transf_21
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
116956923
NCBI-ProteinID:
XP_032834700
UniProt:
A0AAJ7UE53
LinkDB
All DBs
Position
68:3670078..3722222
Genome browser
AA seq
1507 aa
AA seq
DB search
MSEYSYRQWRRIGDEEPESSPATCARPEERDHGDDHHGDGHHGDGHHGDGHHGDDHHGDR
HHGDDDRCSDDDRYARIEHRPTPRAGAAAGGAAAGDGFRSWWFEKSPERPLPSTDGSDDG
TGGGGAASEHGNESTDSEDFWDRFNIRPDVDEEETSTRCLRLVKLLLLALLFLVVLATAV
VSELCLVYMGELKRVFDSPEEDMFVRWMLTLTLTLPAIFSLVRCILRLMFKASEVFNFKA
IALNCLVEAFAGAGASIMATVVIPGPALDIVSGILVLNGVTLAPALLDVANAFQAPAGRG
RRARSVAALAACLLAFASIAVKVSLVDLQPQPQQPQQPADATAEKFVHLTLLLVGLLLVS
LHWWENFTPERWLAGHRRALAASANLAELSGSAARVVAAVGVALAALGLEHGRDYGRVAA
VVVAGADGGGLPSGATLALALFGAQAAATVACAWFASAACKIRQQRSCFAAPLCLASPVA
LLFPFAVYAALGGGDAALGGCASVAARASAPRNASVGARELFYERTVRAACAYLDAPSAA
DAAEAAWPGRGHAANAAATAAAGALWLGALLLLVACHAWRGDGMRMERTRDLFARGSPHS
LCVTAGLLLSRRRPEGSPAGKAEGHRDRSLEQEYVKIYICATMWHETKEEMVKIVSSILR
LDRSQPKRQKASAGSVGGWGGGGRGGAGGGGGGGGGGGGAGGGAPVGRTKRELYDFSAHV
YFDDAFHTTPAGDRAVNEFVSNLVDVVKEVTKYFNRTGGVEREGPPVEWTPTPYGARMSY
RLPHGNSLNVHLKDKELIRHRKRWSQVMYLYYLLGCKIYRKARAMGKDEREAWLEKTKQN
TFVMVLDGDTDFQPSALSMLVDQLRRDSNVGAACGRIHPTGIGPVVWYQKFEYAVGHWLQ
KTAEHVLGCVLCSPGCFSLFRAKAIMDDNVLKTYTTVATEALHYVQYDQGEDRWLCTLML
QQGWRVEYCASADAYTNAPQDFAEFFNQRKRWGPSTMANTINILAQGSRMAKRNPSISRL
YILYQIIYTATSILGPATICLLTAGSFVILFKLDENWALFTAVIPPSCYIAICFWTKAAT
HIKVGMFLTVLYMFLMLATFISIVVDMVTNGIFTPNGIFVMTLAAVHVTAALLHPSELWC
LLHGFVYALCIPAGYLLLVIYALVNMSNVSWGTRENSAPSIAHSGRGKAMGKRLSRGAAG
GGAGGCCCCCWMPSEWSCLKWTVRVRPKRNVEGAGKQEAESASVHTRSWKITRKRSSRRT
GDEPSSVACPAPAEVHVNFRQDSNEDAREQAAAGREGPADCDPSPNDITQARGIGRLSLL
KEEERAFWSDVITKYLKPLEENDEHKANVTKGLNKLRNKATFVYFLINALWLVATMVLQL
VGDDLDIQVPKPSDPTQTEAVPPLSLVFLVIFAFILIVQFLAMLYHRVYTVLHFLSYVGS
SSDGRDRAAPPSAEATERRRDVWASSASGGFFFDDVVDDVVPTVLGRSGRGWEEEDADSG
NVNSLIY
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaatactcgtatcgccagtggaggcgcattggagacgaggagccagagagctcg
ccagcgacgtgcgctcgacccgaggagagggaccacggcgacgatcaccatggcgacggt
caccacggcgacggtcaccacggcgacggtcaccacggcgacgatcaccatggcgaccgt
caccacggcgacgacgatcgctgcagtgacgacgatcggtacgcgcgcatcgaacatcgt
ccgacgccacgtgcaggagcagcagcaggaggagcagcagcaggagacgggttcaggtcg
tggtggttcgaaaagtcgccggagcggccgctgccttcgacggacggcagcgacgatgga
acaggaggaggaggagcggcgtcggagcacggcaatgagtcgacagactcggaggacttc
tgggatcggttcaacatccgtccggacgtggacgaggaggagacttcgactcggtgtctc
cgcctcgtcaaactcctcctgctcgctctcctcttcctcgtcgtgctcgccacggccgtc
gtcagcgagctctgcctcgtctacatgggggagctgaagagggtcttcgattcgccggag
gaggacatgttcgtccgctggatgctcaccctgacgctcaccctcccggccatcttcagc
ctcgtccgttgcatcctgcggctgatgttcaaggcctcggaggtcttcaacttcaaggcg
atagccctgaactgcctcgtcgaggctttcgctggcgcgggcgcctccatcatggccacc
gtggtcatcccgggcccggcgctggacatcgtcagcggcatcctcgtcctcaacggagtg
accctcgcgccggccctcctcgacgtcgccaacgcgttccaggcgcccgcgggccgcggc
aggcgggctcggagcgtcgccgcgctggccgcgtgcctgctggcgttcgcctcgatcgcc
gtcaaggtgtcgctggtcgacctgcagccgcagccgcagcagccgcagcagcccgccgac
gccaccgccgagaagttcgtccacctgacgctactcctcgtcggcctcctcctcgtctcc
ctccactggtgggagaacttcacgcccgagcggtggctcgccgggcaccgccgcgccctc
gccgcctcggccaacctcgccgagctctcgggctcggcggcgagagtcgtcgccgccgtc
ggcgtcgcgctcgccgcgctcggcctcgagcacggccgggactacggccgcgtggccgcc
gtcgtcgtcgccggcgccgacggcggcggcctcccctccggcgcgacgctcgccctcgcc
ctgttcggggcgcaggcggccgccaccgtcgcctgcgcgtggttcgccagcgccgcgtgc
aagatccgccagcagcgcagctgcttcgcggcgccgctgtgcctggcgtcgcccgtcgcc
ctcctgttccccttcgccgtctacgcggccctcggcggcggcgacgccgcgttgggcggc
tgcgcctccgtggccgcgcgggcgtcggcgccgcgcaacgcgagcgtcggcgcccgcgag
ctcttctacgagcgcacggtgcgggcggcctgcgcgtacctcgacgccccctcggctgcg
gacgccgccgaggcggcgtggccgggccggggccacgcggcgaacgcggcggcgacggcg
gcggcgggcgcgctgtggctcggcgcgctgctgctcctcgtcgcgtgccacgcgtggcgc
ggcgacgggatgcgcatggagcgcacccgggacctgttcgcgcgcggctcgccgcactcg
ctgtgcgtgaccgcggggctgctgctgagccgcaggcggcccgaggggtcgccggcgggc
aaggcggagggccaccgcgacaggagcctggagcaggagtacgtgaaaatctacatctgc
gccacaatgtggcacgagaccaaggaggagatggtgaagattgtctcgtcaatcctgcgg
ctcgaccggagccaacccaagaggcagaaggcatcagcgggatctgttggaggttgggga
ggaggtggaagaggtggagcgggtggaggaggtggagggggtggaggaggtggaggggct
ggaggaggcgcgcccgtgggccgcaccaaacgcgagctgtacgacttctcggcccacgtc
tactttgacgacgccttccacacgacacctgccggcgacagggcagtgaacgaattcgtc
tccaacctcgtggacgtcgtcaaggaagtgaccaagtacttcaacaggacgggcggtgtg
gagcgggagggaccccccgtggagtggacgcccactccgtacggggccaggatgagctac
cgcctgccacacggcaactccctgaacgtgcacctcaaggacaaggagctcatccgccac
cgcaagcgctggtcccaggtcatgtacctgtactacctcctcggctgtaagatttaccgc
aaggcgagggcgatgggcaaagatgagcgcgaggcgtggcttgagaagacgaagcagaac
accttcgtgatggtgctggacggtgacacggacttccagccgtccgcgctctccatgctc
gtcgaccagctcaggagggactccaatgttggggcggcctgcggcagaatccaccccacg
ggcatcggtcccgtggtgtggtaccagaagttcgagtacgctgtgggccactggctgcag
aagacggccgagcacgtgctgggctgcgtcctctgctcacccggctgcttcagcctcttc
cgagccaaggccatcatggacgacaacgtcctcaagacctacaccaccgtggctaccgag
gcgctccactacgtccagtacgaccaaggcgaggaccgctggctctgcaccctgatgctc
cagcagggctggcgcgtggagtactgtgccagcgccgatgcttacaccaacgcgccacag
gacttcgccgagttcttcaaccagcgcaagcggtggggcccctccaccatggccaacacc
atcaacatcctcgcccaggggtctcgcatggccaagaggaacccctccatctcgcgcctc
tacatcctctaccagatcatctacacggccacctccatcctgggacccgccaccatctgc
ctcttgaccgcaggctcgttcgtcattttgttcaaactggacgagaactgggctctcttc
accgccgtcatcccgcccagctgctacatcgccatttgcttctggacaaaagcggccacg
catatcaaggtgggcatgttcctcaccgtcctctacatgttcctcatgctggcgacgttc
atctccatcgtggtggacatggtgacgaacggcatcttcacgcccaacgggatcttcgtc
atgacgctggcggctgtgcacgtgacagcggcgctgctgcaccccagcgagctgtggtgc
ctcctgcacggcttcgtctacgcgctgtgcatccccgcgggctacctcctcctcgtcatc
tacgcgctcgtcaacatgagcaacgtgtcgtggggcacgcgcgagaacagcgcgcccagc
atcgctcactccgggagggggaaggcgatgggcaagcggctctcgcgtggagctgcagga
ggcggcgctgggggctgctgctgctgctgctggatgccgtcggagtggagctgcctcaag
tggaccgtcagggtgaggcccaagaggaacgtggagggggccgggaagcaggaggcagag
agcgccagcgtccacacgcgatcgtggaagatcacgaggaagcgctcctcgcgccggacg
ggcgacgagccctcgtccgtggcgtgcccggcgcccgccgaggtccatgtcaacttccgc
caagactccaacgaagacgccagggagcaagcagccgcagggagagagggcccagccgac
tgcgacccgtctccgaacgacatcacccaggcacgaggaattggacgcctctctctgctg
aaagaggaggagcgagccttctggagcgacgtgattaccaagtacctgaagccactggag
gagaacgatgagcacaaggccaacgtgaccaaggggctcaacaagctgcgcaacaaggcg
accttcgtctacttcctcatcaacgccctgtggctcgtcgccacgatggtgctccagctg
gtgggcgacgacctcgacatccaggtgcccaagcccagcgaccccacgcagacggaggcc
gtgccgcccctctccctcgtcttcctcgtcatcttcgccttcatcctcatcgtccagttc
ctcgcgatgctctaccacagggtgtacacggtgctccacttcctctcctacgtgggctcg
tcgagcgacggccgagacagggcggccccccccagcgcggaggcgacggagcggaggcga
gacgtgtgggcgtcctcggcgagcggcggcttcttcttcgatgacgtcgtcgatgacgtc
gtcccgacggtgctgggtcgcagcggcagggggtgggaggaggaggacgccgattctggc
aacgtcaactcgttgatttactag
DBGET
integrated database retrieval system
