Petromyzon marinus (sea lamprey): 116956973
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Entry
116956973 CDS
T09614
Name
(RefSeq) integrin alpha-X-like isoform X1
KO
K06462
integrin alpha X
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116956973
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmrn04515
]
116956973
04090 CD molecules [BR:
pmrn04090
]
116956973
Cell adhesion molecules [BR:
pmrn04515
]
Integrins
Integrin alpha subunits
116956973
CD molecules [BR:
pmrn04090
]
Proteins
116956973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_2
ITGAX-like_Ig_3
Integrin_A_Ig_1
FG-GAP
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
116956973
NCBI-ProteinID:
XP_032834768
UniProt:
A0AAJ7UHC6
LinkDB
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Position
68:complement(956626..1015429)
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AA seq
624 aa
AA seq
DB search
MFGRSLHSLMDVSGDGLRDLAVGALGNALVLRSRPIVNVSLTLTFKPARIPLHDQRCPNP
SSTSSSSSSSSSTSSSSSTSMITLSVCFVSHSAHVERNVPTLVATYDISLDVGKRAPRAT
FNRAASSAASSASSASSASSAAASAAASASAGAVGTSFKRSNVSVAGGAESGKACVDIKV
YIACESEDLSTAISIGGNFSVESVDATEPSAVLNQLVPSHVTTQLQFQKDCGADDLCIAD
LQVKIALDSSGPLLLGELQNLTSVVTLRNSREESYSTRLTLTVPGNLQFRSATSASALRN
FDCSFTNGHLVCSVDNPVMRASTEVSLRFVFDAACNDTADTSLTIAVSATCTNEDKSTLM
DNSATVQRPLLYAVNAVLQGSDSLHLSFNKSETEDKQVSLSFTAQNLGSIPATVELMVSV
PTSGEDRVTFLRVDQAVTQPTGGVCKTSDTPGRDDTTRPTNPTTVDYPVWDCHNKLCTHV
LCSGLLLRPGDAMDITLALTLTVPTITKEVESKLVIVSSAQLHVDTSRFRLSSRHNFHSS
QVRLVLEVHKLHNNLPIIIGSSVGGLLLLALVTAILYKTGFFKRDYQAKLQEAVQEGQQN
PGQQEPGQQEPGQQEPGQPEPEPL
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggaggtcgctccactcgctgatggacgtcagcggcgacggcctcagggatttg
gccgtgggagcgttgggcaacgccctggtgctgaggtctcgtccgatagtgaacgtgagc
ttgaccctcacgttcaagcccgcacggattcctctgcatgatcagagatgtcccaaccca
tcctccacctcctcctcctcctcctcctcctcctccacctcctcatcctcctccacctcc
atgatcaccctcagcgtctgcttcgtctcccacagcgcccacgtggagagaaacgtcccc
accctggtggccacctacgacatctcgctggacgtgggcaagcgagcgccaagagcgacc
ttcaacagggcagcatcctcagcagcctcctcagcctcctcagcctcctcagcctcctca
gcagcagcctcagcagcagcctcagcatcagcaggagccgtgggcacgagcttcaagcgg
agtaacgtcagcgtggccggcggagcagagagcggcaaggcctgcgttgatatcaaagtc
tacatagcgtgtgaatctgaagatctctccaccgccatctccatcggcggcaacttctct
gtagagtctgtagacgctacagagcccagtgcagtgctgaaccagctggtgcctagccac
gtgaccacacagctccagttccagaaggactgtggagctgatgatctatgcattgctgac
ctgcaggtgaagatcgccctggatagctctgggcccctgttgctgggtgagctccagaac
ctcacgagcgtcgtgactctacggaactcccgtgaggagtcgtactccacacgactcacc
ctcaccgtgccggggaacctgcaattccgctccgccacctcagcctccgctctaaggaac
tttgactgctccttcacgaacgggcatctcgtgtgttctgttgacaacccggtgatgaga
gcttctacagaggtgagcctgaggttcgtgtttgacgcagcctgtaatgacacggctgac
acatcgctcaccatcgctgtgtcagctacctgcaccaacgaggacaagtcgacgctgatg
gacaactccgccacggtgcagcgcccgctgctgtacgccgtcaacgccgttctccaagga
tcggactctctgcatctgagtttcaacaagagtgaaacggaagataagcaagtcagcctg
tcattcacagctcagaacctgggctccatcccggccacggtggagctgatggtcagcgtg
cccacatcgggagaggaccgagtgaccttcctgagggtagaccaagccgtgacacagccc
acaggaggagtctgtaaaacgtcggacaccccaggtcgtgatgacaccaccagacccacc
aaccccaccactgtggattatcccgtttgggactgtcacaacaagctgtgtacccacgtg
ctctgctccggcctcctgctccggccaggcgatgcgatggacatcaccctggcactgact
ctaactgtgcccacaatcaccaaggaggttgagagtaagttggtgatcgtgagctcggcc
cagctgcacgtggacacaagtcgcttccgtctctcatccagacacaactttcactcctca
caggtgcgtctcgttctggaggttcacaaactccacaacaatcttcccatcatcatcggc
agttcagttggaggccttctactccttgcgctggtgactgccatcctgtacaagactggc
ttcttcaagcgtgactaccaggcaaagctgcaagaggccgtgcaagaagggcagcagaat
ccagggcagcaggagccagggcagcaggagccagggcagcaggagccagggcagccggag
ccagagccactctag
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