Petromyzon marinus (sea lamprey): 116957175
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Entry
116957175 CDS
T09614
Name
(RefSeq) eukaryotic initiation factor 4A-II
KO
K03257
translation initiation factor 4A
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116957175
03012 Translation factors [BR:
pmrn03012
]
116957175
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmrn04147
]
116957175
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116957175
mRNA cycle factors
Stress granule specific factors
116957175
Translation factors [BR:
pmrn03012
]
Eukaryotic type
Initiation factors
eIF-4
116957175
Exosome [BR:
pmrn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116957175
Exosomal proteins of bladder cancer cells
116957175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
Flavi_DEAD
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
116957175
NCBI-ProteinID:
XP_032835066
UniProt:
A0AAJ7UH02
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All DBs
Position
70:2024061..2050459
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AA seq
439 aa
AA seq
DB search
MGGGGSRPLHIKYRCADRAALLFRFAAKLRGKMSDTSAEYRSRDNGPEGMEPDGIIESNW
NEIVDNFDDMSLKETLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFA
ISILQQLDVSTKETQALVLAPTRELAQQIQKVVLALGDYMGAACHACIGGTNVRNEMQKL
QAEAPHIVVGTPGRVFDMLNRRYLSPRAIRMFVLDEADEMLSRGFKDQIYEIFQKLNSNI
QVVLLSATMPAEVLEVTKKFMREPVRILVKKEELTLEGIKQFYIMVEREEWKLDTLCDLY
ETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDLIMREFRSGSSRVLI
TTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI
ETFYNTQVEEMPMNVADLI
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggggtgggtcgcggccgcttcacataaagtatcgctgcgcggaccgggccgcc
cttcttttccgttttgccgcgaagctgcgagggaaaatgtccgacacgtctgccgagtac
agatcccgtgacaatggcccggagggtatggaacccgatggcatcattgagagcaactgg
aatgagatcgtggacaactttgatgacatgagcctcaaggagactctgctgcgtggaatc
tacgcctacggctttgagaaaccgtctgccatccagcagcgcgccatcctgccctgcata
aagggctatgacgtgattgcccaggctcagtctggcacagggaagaccgccaccttcgcg
atctccatcctgcagcagctggacgtgagcaccaaggagacgcaggccctcgtgctggca
cccacccgcgagctggcgcagcagatccagaaggtggtgctggcgctgggcgactacatg
ggcgccgcctgccacgcctgcatcgggggcaccaacgtgcgcaacgagatgcagaagctg
caggcggaggcgccgcacatcgtggtgggcacgccgggccgcgtcttcgacatgctgaac
cgccgctacctctcgccgcgcgccatccgcatgttcgtgctggacgaggccgacgagatg
ttgagccgcggcttcaaggaccagatctacgagatcttccagaagctcaactccaacatc
caggtggtgctgctgtcggccaccatgccggccgaggtgctggaggtgaccaagaagttc
atgcgcgagccggtgcgcatcctcgtcaagaaggaggagctcaccctggagggcatcaag
cagttctacatcatggtggagcgcgaggagtggaagctggacacactgtgcgatctctac
gagacgctcaccatcacccaggcggtgatcttcttgaacacccggcggaaggtggactgg
ctcacggagaagatgcacgcgcgtgacttcaccgtgtccgccatgcacggtgacatggat
cagaaggagcgggacctgatcatgcgcgagtttcgctcgggctccagtcgcgtgctcatc
accacggacctgctggcccgtggtattgacgtgcagcaagtctccttggtcatcaactac
gacctgcccaccaaccgagagaactacatccacaggattggacgagggggtcgtttcggc
cgcaagggcgtcgccataaactttgtgacggaggaggacaagcgaatcctccgcgacatc
gagacgttctacaacacgcaggtggaggagatgcccatgaacgtggccgacctcatctag
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