Petromyzon marinus (sea lamprey): 116957428
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Entry
116957428 CDS
T09614
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04020
Calcium signaling pathway
pmrn04080
Neuroactive ligand-receptor interaction
pmrn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116957428 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116957428 (GRIN1)
04082 Neuroactive ligand signaling
116957428 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
116957428 (GRIN1)
Ion channels [BR:
pmrn04040
]
Ligand-gated channels
Glutamate (ionotropic)
116957428 (GRIN1)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
ArenaCapSnatch
Motif
Other DBs
NCBI-GeneID:
116957428
NCBI-ProteinID:
XP_032835449
UniProt:
A0AAJ7UFQ1
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Position
74:complement(942866..1020553)
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AA seq
1035 aa
AA seq
DB search
MAPAMALAALTVVLLAGGPARPLGGFGGAADAQEAPGRIVQLGAVLSSSAHEAIFREAVW
AANRRLGLWRIQLNATAVTQRDNAIKMALAVCEELISKQVHAILVSHPPHPHEHMNPTPV
SYTAGFYRIPVIGLSNRLSIYSDKSIHLSYLRTVPPYSHQALVWFDLIEHFKWGHIVLIV
SDDHEGRAVQKRLEKLLEEEEIKKTSKYLKSYESYDNLLPDNEPGPKTEKTILFPPGSKN
VTLLLSEAREVEARVILLVAEAEDASTVYRDAALLNMTGSGYVWLVGEREVSPAALVNAP
EGLLGLQLQHGSNESAHIRDAVALLAHSIKEATERENVSEPPRGCVGNTAVWKGGLTLNR
YLLSASLKEGLTGRVEFDEEGDRRHPEYVLVNLQAGRNLVPVGAWTEENKAQVNDKDIVW
PGGGKVIPDGFKMSTKLKIVTIHQEPFVYVKPTLKDGTCKKELTIFGDTIQKVICMGPNN
TLPVRCVAAGRPIVPQCCYGFCVDLLIKLANNLNFTYDVHLVHDGKFGTQERVNNSNKKE
WNGMMGELLMGQADTIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQP
FQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEDEEEDALTLSSAMWFSWGVLLNS
GIGEGSPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEALITGINDPRLRNPSD
KFIYATVKQSSVDIYFRRQVEFSTMYRHMEKHNYDSAGEAIQAVKDGTLHAFIWDSAVLE
FEASQKCDLVTAGELFFRSGFGIGMRKESPWKQKVSLSILSFHESGFMEDLDRTWVRYQE
CDSRSNSPATLTFENMAGVFMLVAGGIVAGMFLIFIEIAYKRHKDARRKQMQLAFAAVNV
WRKNLQPDTLSDEQRSEPSPTSHRHHQTPPLGFYHHHNNNNHHYHHHHHQRHHQAAAGLA
PLPPQQQQQQRHWATQRLDALPLLAQKPAGQRSGERQDGDGLSSPESLPPRHRTHIDPRT
LAHPLARPALRHTII
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggctccggcgatggcgctcgccgcgctaaccgtcgtcttgctggccgggggtccggcc
cgccccctgggcgggttcgggggtgccgcggacgcccaggaggcgcccgggagaatcgtc
cagctgggcgccgtgcttagctcgtcggcgcacgaggccatcttccgggaggccgtgtgg
gccgccaaccggcggctgggcctgtggcggatccagctgaacgcgacggccgtgacgcag
agggacaacgccatcaagatggcgctggccgtgtgcgaggagctgatcagcaagcaggtt
cacgcgatcctggtgagccacccgcctcacccgcacgaacacatgaacccgacccccgtg
tcctacaccgctgggttctatcgcatccccgtgattggactcagcaaccgcctctccatc
tactcggacaagagtatccacctgtcctacctgcgcacggtaccgccatactcgcaccag
gccctggtgtggttcgatctcatcgagcacttcaagtggggccacatcgttctcatcgtc
agcgacgaccacgagggccgcgccgtgcagaagcggctcgagaagctcctggaagaggag
gagatcaagaagacgagtaaatatctcaagagctatgagagctacgacaaccttttaccc
gacaacgagccgggacccaagacggagaagaccattctgttcccgcctggatcgaagaac
gtcacgttgcttctgagcgaggcgcgggaggtggaggccagggtcattctcctggtggct
gaggccgaggacgcgtccacggtttaccgcgacgcggcgctcctcaacatgacgggcagc
ggctacgtgtggctcgtgggcgagagggaggtctcgcccgcggcactggtcaacgcgcct
gaagggctgctgggcctgcagctgcagcacggctccaacgagagtgcccacatccgcgac
gcggtggcgttgctcgcccactccatcaaggaggcgacggagagggagaacgtcagcgag
cccccgcggggctgtgtgggcaacacggccgtgtggaagggaggcctcacgctcaaccgg
tacctgctgtcggccagcctcaaggagggcctcactgggcgcgtggagttcgacgaggag
ggcgaccgccggcaccctgagtacgtcctcgtgaacctgcaggccgggcggaacctcgtg
cccgtgggggcctggacggaggagaacaaggctcaggtcaacgacaaggacatcgtctgg
cccggagggggcaaggtcatcccagacgggttcaagatgtcaaccaaactcaagatcgtc
acgatccaccaggagccgtttgtctacgtgaagccgaccctgaaggatggcacctgcaag
aaggagctcaccatcttcggcgacaccatccagaaggtcatctgcatggggcccaacaac
accctgccagttcgttgcgtggcggcaggacggcccatcgtgccgcagtgctgctatggc
ttctgcgtggacctcctcatcaagctggccaacaacctcaacttcacctacgacgtccac
ctcgtgcacgacggcaagttcggcacacaggagcgggtgaacaacagcaacaagaaggag
tggaacggcatgatgggggagctgctgatggggcaggcggacacgatcgtggcgcccctc
accatcaacaacgagcgggcgcagtacattgagttctccaagccgttcaagtaccaggga
ctcaccatcctcgtcaagaaggagatcccgcgcagcaccctcgactcgttcatgcagccg
ttccagagcacgctgtggctgctcgtgggactctcggtccacgtggtggccgtcatgctc
tacctgctcgaccgcttcagtccgttcgggaggttcaaggtgaacagcgaggatgaggag
gaggacgccctgacgctctcctccgccatgtggttctcttggggagtgctgctcaactcc
ggcatcggggagggcagcccccggagcttctcagcgaggatcctgggcatggtgtgggcc
ggcttcgccatgatcatcgtggcctcctacacggccaacctcgccgccttcctcgtgctc
gaccgcccggaggccctcatcaccggcatcaacgacccgcggctgcggaacccatcggac
aagttcatctacgcgacggtgaagcagagctcggtggacatttacttccggcgccaggtg
gagttcagcaccatgtacaggcacatggagaagcacaactacgacagtgccggggaggcc
atccaggccgtcaaggacgggactctgcatgccttcatctgggactcagctgtgctggag
ttcgaggcgtcccagaagtgcgacctggtgactgccggggagctgttcttccgctcgggg
ttcggcatcggcatgcgcaaggagagcccctggaagcagaaagtgtccctgtccatcctc
agtttccacgagagcggcttcatggaggacctggaccgcacgtgggtgcgctaccaggag
tgtgactcacgcagcaactcgcccgccacgctcaccttcgagaacatggccggtgtgttc
atgctggtggcggggggcatcgtggcggggatgttcctcatcttcatcgagatcgcctac
aagaggcacaaggacgcgaggcgcaagcagatgcagctggcgttcgccgccgtcaacgtg
tggcgcaagaacctccagccggacaccctttcggacgagcagagatccgagcccagccca
acatctcaccgccatcaccaaactccgccactgggattctaccaccaccacaacaacaac
aaccaccactaccaccaccaccaccatcagcggcaccaccaggctgcggcgggtctggct
cctcttccgccgcagcagcagcagcagcagcggcactgggccacgcagcggctggacgct
ctgccgctgctggcccagaagccggctggccagcggtctggcgagcggcaggacggcgac
gggctgagctccccggagtcgctccccccgcggcaccgcacgcacatcgacccgcgcacg
ctggcccacccgctggcgcgccctgccctgcggcacaccatcatctag
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