Petromyzon marinus (sea lamprey): 116957446
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Entry
116957446 CDS
T09614
Symbol
NCAPD3
Name
(RefSeq) condensin-2 complex subunit D3 isoform X1
KO
K11491
condensin-2 complex subunit D3
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116957446 (NCAPD3)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
116957446 (NCAPD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
Adaptin_N
HEAT_GCN1_C
HEAT
PDS5
Cnd3
HEAT_EF3_N
HEAT_2
GNC1_N
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
116957446
NCBI-ProteinID:
XP_032835483
UniProt:
A0AAJ7UFH2
LinkDB
All DBs
Position
3:complement(23110996..23139735)
Genome browser
AA seq
1529 aa
AA seq
DB search
MALGALLNAFQALKVESVSSEWADGVWEQDFTDTVPLEGWLEEEVLARGVDAFDQLHLRL
ENVAHAQEDAESIWSFLYEKRISHQNLIAILHHFVNSGQKQTSSFQQRILAMKAACVYFL
LLEIPGSIAHKVFHPVLFDKCVAVAQKVLPQTSHGKRKLKSAPLKGSQSATGRGRKAKQP
RLEEEVHDALENEDDDEEAEEVALTGQNVERLHDVACLLLKTLHCLLSVFSLKGNPQCVG
HCIQVLVELTKQNSHSQKIDFALNVSASQAHSLAELAYFNLKALCTSSHGSKDEVLRNVF
HRLLNHILMVGGEARANLVLAFIPQYAVTLRNQTLKFVCHLVKEVGEKCIPLLRILLQHI
CVKVPDKADYRGHAAQAVCKLLDCMSSSAYAEFIEWLYKYSQNAKVGYRVFALDVILELL
DCPEREADSTVSAGRLRFFSHKFLMHSTVVRRCCDRMSTVRAKALSALAKSLNQHGSTAV
ECVHEIVQGGPYRLTSYTTMCAAGFNVTDNSLGTANLTNTSQCVEKSNSKTRTVGALKTI
EITDLGNETLPYGQEVLSMLKERTADEKPGVRKSALQVLEGMLQHGILPLTDVDLACLVD
RCHDPALSVRKQALLSLTNLLKSHPENGTLLRAWLKGLLPAVIDRETSVQEKVLEYLDEV
ILKNVKEKQTGTGGSSNHDPSHKRAWDILDMLVIPEHQELVSYLGKACHMLATKNPFSAS
LINALLSHVQSEHAPAAWLLLSKVAGHCPKINCTKILACWDQVHRNSDVMPSTMCHILAV
IGTMAKNISNDGCHQLIENLLERLRSFDCPLEVITASVSTLDHLCRAQQESQESAMKKVS
VWCKELIEACDAYISRVVLTETGRVGMHEDKLIRYVFTLGEVAQLSPRNINKRIFLLVQS
LLASPNLEQGETAGESEETAVPSSQPILLSQALSHFHGSSMPTIVRAHAFITLGKLCLQN
EDLAKKCIPALARELEISPEISIRNNVIIIMCDLCIRYTTLVDRYISKISACLRDEEPFI
RRQTLVLLTNLLQEDYVKWRGFLFHRFASVLVDSDPGIRSFAEFCLIHLLLKKHTGIIFQ
HFIECIFHFNSYEKHEKYQFNQTEREKHLFSLKGSHNKSKRMTIYRLLLEHLTDEQRFNL
STKLAQNILGSFVDGMLALDMEAADLLSDIFSVLCCKEIKLVVSRARPADEELPEDGEMA
MANAVMQVAQKKLISQVQKKNFVENIIPIVIMLKKQMETKRLPVLKDLMQYLREVMKDYR
DEVKDVLAADKRLAAEVEYDLKKYEEEEERERARLSGDVPLPPNGPAGPSSPSSPRVHSP
TAAPAPPDCHSLHVCKDGAANTSNTSSLGGESSKPLEPNGINYTPLANKTSRHQSLSTVA
IVNSARKLVAAQRKIHNQSISVTTPPSNSKPGSELIRNTQQKACEPRVTQGSSWRAFSTP
DHTMDDMTFTDADVDLSVITSAVPNASGSQEATSCPRKDVLCLLSPDKPAPSIRPWNLSS
PTGKSKKPFQPRRNTAAQKFPLSPCNSLK
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atggcactcggcgccctcctcaacgccttccaggcgctgaaggtggagagcgtcagcagc
gaatgggcagatggagtatgggagcaagacttcacggatacagtgccactggagggctgg
ctggaagaggaggttttggccaggggtgttgatgcatttgaccagttgcatctgcgcttg
gagaatgtggcacatgcacaggaggatgctgaaagtatttggagcttcctttatgagaag
cgtatttctcatcaaaatctgatcgccatacttcatcactttgttaacagtggccagaag
cagacctcttccttccagcagcgcatactcgctatgaaggctgcatgtgtttactttctc
ctgctggagatccctggcagcatagcacacaaggtctttcatccggtgctttttgacaaa
tgtgtcgctgtggctcaaaaagtcctcccacagacatcacatggtaaacggaaactaaaa
agtgcaccactcaagggcagtcaatcagccacagggagagggcgcaaggccaagcagcca
cgcttggaggaggaggtgcacgatgcgttggagaatgaggacgatgatgaggaggccgag
gaggtggcactcacaggacagaatgttgagcggctgcatgatgtggcgtgcttgctgctg
aaaaccctgcattgcctgctctccgtgttctcgcttaaagggaacccgcagtgcgtcgga
cactgcattcaggtccttgtggagctaaccaaacaaaacagccactctcagaaaattgac
ttcgcactaaacgtaagcgcaagccaggcccactcactggcagagctcgcgtatttcaac
ctgaaagcactctgcactagctcccatggctccaaagatgaggttctacgaaatgttttt
catcggctgttgaaccacatcctcatggtgggcggggaagcacgtgcaaatctggtgctg
gcttttattccacagtatgcagtcaccttgagaaaccaaacgctaaagtttgtgtgtcat
ttggtcaaagaagttggtgaaaagtgtattccactcctccggatccttctacagcacatt
tgtgttaaggtcccagacaaagcagattaccggggtcatgcagcacaagcggtgtgcaag
ctattggactgcatgagcagctcagcttatgcggaattcattgagtggctctacaaatat
tcgcagaatgccaaggtgggctaccgcgtgtttgcactggacgtcattttggagcttctg
gattgcccagagcgagaggcggacagtaccgtgtctgctgggcgcctcaggtttttttca
cacaagttcctgatgcatagcactgtggtgcgtcgctgctgcgaccgcatgtccactgtg
cgtgccaaggccctgtctgccctagccaagagcctgaatcagcatggcagcaccgctgtg
gagtgtgtgcacgagatcgtgcagggaggaccctatcgactgacctcatacacaacgatg
tgtgctgcgggcttcaatgtaaccgacaactctcttggcacagcaaatttgactaacaca
tctcaatgtgttgagaaaagtaacagcaagacacgtacagtgggggctttaaaaactatt
gaaatcacagacctgggcaatgagacacttccatatggtcaagaagttttgtccatgctg
aaggaacgaacagcagatgaaaaacccggtgtcaggaaatcagcattacaggtgctggag
gggatgttgcaacacggcatcttgccgttgacagatgtggacctggcctgcctggtggat
cgatgtcatgatccggcactctctgtcagaaagcaagcactgctttcactaactaatctc
ctgaagagccacccagagaatggaacgctacttcgcgcctggctcaagggtctactgcca
gctgtcatagaccgagagacgtctgttcaggagaaagtgctggagtatctcgacgaggtc
attcttaagaacgtgaaagagaagcaaacgggcaccggaggctcgagcaaccacgacccc
tcccacaaacgcgcgtgggacattcttgacatgttggtcattccagagcatcaggaattg
gtctcgtacctcgggaaagcttgccatatgctggctaccaagaatcccttcagtgcatcg
ttaattaatgcactactctcccatgtccagtcagagcatgcccctgctgcctggctactc
ttatccaaggtagctggtcactgccccaagattaactgcactaaaatattagcatgctgg
gaccaagtacacaggaattctgatgtaatgcccagtaccatgtgtcacattctggcagtg
attggtaccatggctaagaatatttctaatgacgggtgccatcagctcatagaaaacctc
ctggaaaggttacgatcatttgattgcccactggaggtgatcactgcctctgtctccacc
ttggaccacctttgtagggctcaacaggaatctcaggagagcgctatgaaaaaggtcagc
gtttggtgcaaggagctcatcgaagcctgtgatgcttacatttccagagtagtgctcact
gagaccgggagggttggcatgcacgaagacaagctgatccgctatgtgttcacactcggt
gaggtggcccaactgtccccaagaaacatcaacaagcgcatcttcctccttgtgcagtct
ctcctggcctccccgaaccttgagcaaggagagacagcaggggagtccgaggaaacggcc
gtcccaagcagccagccaattctgttatctcaggcactgtcacacttccacggctccagc
atgcctaccattgtacgggcgcatgccttcatcactctggggaaattgtgtttgcagaat
gaagacttggccaaaaagtgtatcccagccctggcccgagagctggagatatcaccagaa
atatccatccgtaacaacgtaatcatcatcatgtgcgacctgtgcatccgctacaccacg
ctggtagaccgctacatctccaagatctcggcgtgtttacgggacgaggagcctttcatc
cgccgacagacgctcgtccttttaaccaacctgttgcaggaggattacgtgaagtggaga
gggtttcttttccaccgatttgccagcgtgctcgtggatagtgatcctggaatccggagc
tttgcagagttttgtctgatccatttgctgctgaagaaacatactggaataattttccag
cattttatcgagtgcatcttccacttcaactcctatgagaagcatgagaaataccaattc
aaccagacagaacgggagaagcacctgttctcactgaaaggctcgcacaacaagagcaag
aggatgaccatctatcgcctattgctggagcacttgacggacgagcagcgcttcaatctg
agtaccaagctcgctcagaacattctcggaagctttgtggatgggatgctggcgctggat
atggaggcagccgacctcctatcggacattttttccgtgctctgctgcaaggagattaaa
ctggtggtgtctcgcgcacggccagcagacgaagagctgcccgaagacggagagatggcc
atggccaatgccgtcatgcaggttgcccagaagaagctcatctcgcaggtgcaaaagaaa
aactttgtcgagaacataattcccatcgtgatcatgctgaagaagcagatggagacaaag
agattgccagtgctcaaggacctcatgcagtatctccgggaggtgatgaaggattaccgt
gatgaggtgaaggatgtcctggcagctgacaaacggctggcggctgaagtcgagtacgat
ctcaaaaagtatgaggaggaagaggagagggaaagggcaagactgagtggggatgttccg
ttgcctcccaatggccctgctggcccctccagcccttccagccccagggtccactctccc
actgctgcacctgctccaccagactgtcattcactgcacgtatgcaaagatggtgctgcc
aatacgtcaaatacaagctcgttaggaggtgaatcaagcaagccgcttgagcccaacggt
atcaactacacacctcttgccaacaaaaccagcaggcatcagtcgttgagcaccgtcgcc
atcgtgaactcggccaggaaactggtggcggcgcaaaggaaaatccacaaccagagcatt
agcgtgactacgcccccgtcgaactccaaacctgggtcggagctaatccgcaatacacag
cagaaagcttgcgagcctcgagtgacccaaggatctagctggagagccttcagtacccca
gatcacacaatggatgacatgacatttaccgatgcggatgttgatctgagcgtcatcaca
tctgctgtgcccaatgcgagtggaagtcaagaggcaacctcgtgtcctcggaaagatgtt
ctttgtctcttgtctccagacaagccagcaccatcgatcaggccatggaacctgagctcc
cccactgggaaaagcaagaaaccttttcaaccaaggagaaacactgctgctcagaagttt
cccctctccccatgtaattcactcaaatga
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integrated database retrieval system
