KEGG   Petromyzon marinus (sea lamprey): 116957561
Entry
116957561         CDS       T09614                                 
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1
  KO
K09272  FACT complex subunit SSRP1/POB3
Organism
pmrn  Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pmrn03000]
    116957561 (SSRP1)
   03036 Chromosome and associated proteins [BR:pmrn03036]
    116957561 (SSRP1)
Transcription factors [BR:pmrn03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    116957561 (SSRP1)
Chromosome and associated proteins [BR:pmrn03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     116957561 (SSRP1)
SSDB
Motif
Pfam: PH1_SSRP1-like Rttp106-like_middle SSrecog POB3_N HMG_box HMG_box_2 HMG_WDHD1 HC2
Other DBs
NCBI-GeneID: 116957561
NCBI-ProteinID: XP_032835685
UniProt: A0AAJ7XIL1
LinkDB
Position
77:1742536..1824358
AA seq 817 aa
MTDVLEFNEVFQEVKGVMMDGRLRLGRQGVVFKNQRTGKVDSVSGAELSEGLWRRVARGH
GLRLSTHAGMVHKFHGFRDNEFEKLAVFFRTHYKLELQQKELCVKGWNWGSVKFAGQLLS
FDVGDVTSFEIPLGTVSQCATGKNEVTLEFHQNDDTDVSLMEVRFYVPPGQEGGADAVEV
FSQSVLSKADVIQATGDALCIFRELQCLTPRGRYDIRIYPSFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQIFFVVSLDPPIKQGQTRYHFLILLFSKDETDTLTISMSEEELAKRFEG
KLQMEMTGPLHELVGRIMKALVNRKITVPGTFLGHAGSSCITCSYKASSGFLYPLERGFI
YVHKPPIHVRFDEISSVNFARGNTTTRSFDFEVETRQGHVYTFSSIEREEYGKLFDFVNG
KKLNIKNRGLKQGMVKYDEELVDSDDEEHDAYLVRMKEEGKIREEAGDSNNSGESTDESF
NPGDEEDDVAEEFDSNAESSASSDDDDEDEEEEEEEGEKRKRKKPARKEVKSQEKPSRKA
ASSRAKRSEDGGKRAKGEGKKRREKKAKDPAAPKRPQSAYFLWLNSSRERIRSENPGIAL
TELSRKAGEQWQSMGADVKKEWERKADEGKREYAAAMTEYRSSGAADAHKELMSRREKPS
SPPPSSSSSKKTSGTSSSRKPKAAAAATSSPIVAKSKEYVSSSSGSSSSSGGDDDDSDGD
GDSQAKKKKEKEVAAKKEVAKKEVAAKKEVAKKEVAKKEAAAKKEVARKRPAASPAGKKK
KQKKGGDSSEGSDDDDEMEEEEEEAVSTPSSSKSDDD
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgacggacgtgctggagtttaacgaggtgttccaggaggtgaaaggagtcatgatggac
ggccgtctgcgcctggggcgccagggcgtggtgttcaagaaccagcgcacgggcaaagtg
gactcggtgtcgggtgccgagctcagcgagggcctctggcgtagggtggcacgcgggcac
ggactccgactcagcacgcacgcgggcatggtgcacaagttccacgggttcagagacaac
gagtttgagaaactggcagtcttctttagaactcactacaagttggagctgcagcagaag
gagctttgtgtcaaggggtggaactggggctccgtgaaattcgcaggccagctgctgtcg
tttgacgtgggtgacgtcacctcgtttgagatcccgctgggcacggtgtcgcagtgcgcc
accggcaagaacgaggtgacgctggagttccaccagaacgacgacacagatgtctccctc
atggaggtgcgcttctacgtgcctcccggccaggagggaggggcggacgctgtggaggtg
ttctcccagagcgtgctgtccaaggcggacgtgatccaggcgacgggcgacgctctgtgc
atcttccgcgaactccagtgcctcaccccgcgcggccgctacgacatccgcatctacccc
agcttcctgcacctgcacggcaaaaccttcgactacaagatcccctacaccaccgtcctg
cgtctcttcctgctgccgcacaaggaccagcggcagatcttctttgtggtgagtctggac
ccgccaatcaaacaggggcagactcggtaccacttccttatcctgctcttcagcaaagac
gagaccgacacactcaccattagcatgtccgaggaggagctggctaagcggtttgagggc
aagctgcagatggagatgacgggacccttgcacgagctggtggggcgcatcatgaaggcg
ctggtcaaccgcaagatcaccgtgcctggcaccttcctgggacacgcgggttcgagctgc
atcacgtgctcgtacaaggcgagctcgggctttctgtacccgctggagagaggcttcatc
tacgtccacaagccaccgatacacgtgcgctttgacgagatctccagcgtcaacttcgct
cgcggcaacaccaccacccgttcgttcgactttgaggtggagacgcgtcagggccacgtc
tacaccttcagcagcatcgagcgtgaggagtacggaaaactttttgacttcgtcaacgga
aagaaactgaacatcaaaaaccgcggtctcaagcagggaatggtgaagtatgacgaggag
ctggtggactctgatgacgaggagcacgacgcctacctcgtccgcatgaaggaggagggg
aagatccgggaggaggccggagactcaaacaactcgggggagtcgaccgatgagtcgttc
aaccctggcgatgaggaggatgatgtggcagaggagtttgacagtaatgctgagagcagc
gcgtccagcgacgatgacgatgaggacgaggaggaggaggaggaggagggggagaagagg
aagaggaagaagcccgccaggaaagaggtgaagtcgcaagagaagccgagcaggaaggcg
gcgtccagcagagcgaagaggagcgaggatggagggaaacgtgccaagggggagggtaag
aagcggagggagaagaaggccaaggaccctgccgctcccaagcggccccagtcggcctac
ttcctctggctcaactcaagccgagagcgaatccgctcggagaaccctggcatagccctc
actgagctatcgcgcaaggcgggggagcagtggcagagcatgggggcagacgtcaagaag
gagtgggagcggaaggccgacgagggcaagcgagagtacgcggcggccatgacagaatac
aggagcagcggagcagctgatgcacacaaggagctgatgagccgcagggagaagccctcc
tccccacctccctcgtcgtcctcctccaagaagacctcgggcacctcgtcgtcacggaag
cccaaggcggccgccgccgccacctcgtcgcccatcgtcgccaagagcaaggagtacgtg
tccagcagcagcggcagcagcagcagcagcggcggcgacgacgacgatagcgacggcgat
ggcgacagccaggcgaagaagaagaaggagaaggaggtggcggccaagaaggaggtggcc
aagaaggaggtggcggccaagaaggaggtggccaagaaggaggtggccaagaaggaggcg
gcggccaagaaggaggtggccaggaagaggccggcggcgtcgcctgcggggaagaagaaa
aagcagaagaaggggggcgacagcagcgagggttctgatgatgatgatgagatggaggag
gaggaggaggaggcggtgagcaccccctcatcgtcaaagtcagacgacgactga

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