Petromyzon marinus (sea lamprey): 116957562
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Entry
116957562 CDS
T09614
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116957562 (VPS53)
Membrane trafficking [BR:
pmrn04131
]
Protein recycling
Others
EARP complex
116957562 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
116957562 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
FBF1
Sec6
Laminin_II
COG5_N
NBD94
GrpE
COG4_N
TelA
COG3_N
Syndetin_C
Exo70_C
Sec8_N
Seryl_tRNA_N
XhlA
ING
VPS51_Exo84_N
Motif
Other DBs
NCBI-GeneID:
116957562
NCBI-ProteinID:
XP_032835686
UniProt:
A0AAJ7XIH5
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All DBs
Position
77:51201..159366
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AA seq
899 aa
AA seq
DB search
MEEEDADLAVDEELGALLVFSPDVERAIEQVFPSQDPLDQRDFNVVDYINSLFPTEQSLA
NIDEVVSKIRLKIRRLDEEIRVVVRGQTNVGQDGRQALEEAQRAIQQLFGKIKEIKEKAE
RSEEMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLVGGVDSLEALTCRRQYGDVRNLLH
GVLNVLDHFHKYTAVPQIRQLDERVRAVQSELGTQILNDFEEAFPSHGGKRPAGPSLVLR
DACLVADILDSRVRSDIIRKFITQHLSEYLLLFQENQDVAWLDKIDRRYAWAKRQLLEYE
EKYGRLFPLHWAMPERIALQFCSITRSELARLMRARSGDLEVKLLLFAIRRTAAFEALLA
QRFSGSTLVTGPQTPKLPSAVSGENSFAGAEEAEAEDAEAEEAEAHGESGSQRETELDKP
RKALVAESPFHGIICKCFEPHLNVYIESQDRNLTQLIQRFAQEARPPPAPQPPPPPAPQP
GGGAGGTGAGGGGAAGGAVLPSCADLFVYYKRCLVQCSQLSRGEALLGLAAVFQKHLQEY
ATRVLQHILPKTPSGSVGLTISSLLKDRDATDTTRFTADELGLICTVLSTAEYCLATTQQ
LEEKLKEKVEPSLADKINLVAETDSFSAVISHCIQLLVQDLDSACDPALTAMSKMPWQNV
EHVGDQSAYVTSVVGHVKSNVPVVRHCLACTRKYFTQFCLKFASAFIPKFINQLFKCKPV
SMVGAEQLLLDTHSLKTALLELPSVGAAVVRKAPAAYTKVVVKGMTRAEMILKLVMSPHE
PPQVFVDNFMKLLSDSGAPDTFQRVLDMKGLKRSEQSSMLELLRHRHHHQPGGAGGAGGG
GGGGGGGVVPLIPRGGGGAGGGGPPPPHSGAPLGLSAGTSPEQENSRIRRLEKLIKKRL
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggacgccgacctggcggtcgacgaggagctcggggcgctgctcgtgttc
tcgcctgacgtggagcgcgcgatcgagcaggtgttccctagccaggatcccctggaccag
cgcgacttcaacgtggtggactacatcaacagcttgttccccacagagcagtccctcgct
aacattgacgaagttgtcagcaaaatccggctgaagattcggaggctggatgaggagatc
cgtgttgtcgttcgcggtcaaaccaacgtggggcaagacggacggcaggcgctggaggag
gcacagagagccatccagcagctgtttggcaaaatcaaggagattaaagagaaagcggaa
cgctcagaggagatggtgaaagagatcacacgtgatattaaacagctggaccacgccaag
cgtcacctcacgacctccatcaccactctgaatcacctccacatgctggtgggaggcgtg
gactcgctggaggcgctgacttgcaggagacagtatggcgacgtccgtaacttgctgcac
ggcgttctcaacgtcctggaccacttccacaagtacaccgccgtgccccagatccggcag
ctggacgagcgggtgcgggctgtgcagtcggagctgggaacccagatcctgaacgacttt
gaagaagcattcccctctcatggtggaaagcgcccagctggtcccagtttggtgctccgt
gatgcgtgcctggtggcggacattctggactcgcgcgtccgctccgacatcatccgcaag
ttcatcacacagcacctctctgagtatctcctcctgttccaggagaaccaggacgtggcg
tggctggacaagattgaccgccgctatgcgtgggctaagcgtcagctgctggagtatgag
gagaagtacggacggctcttccctctccactgggccatgcccgagcgcattgccctgcag
ttctgtagcatcacacggagtgagttggcacgcttgatgcgggcgcgctccggggatctg
gaggtgaagctgctgctgtttgccatccggcgcacggcggcgtttgaggcgttgctggct
cagcgattcagcgggagcacgctggtgacaggtccacagacacccaagctgccgtctgcg
gtgtctggggagaattccttcgctggggctgaggaggcggaggctgaggatgctgaggct
gaggaggcggaggcccacggtgaatccggctctcagcgggagacggagctcgacaagcct
cgcaaggcgctggtggctgagagccccttccacggaatcatctgcaagtgcttcgagccg
cacctcaacgtgtacatcgagtcgcaggacaggaacctgacccagctgatccagcgcttt
gcccaggaagctcggccaccaccagcgccacaaccaccgccaccaccggcaccacaaccg
ggcggcggtgccggtggcaccggtgccggtggtggtggtgccgctggtggagcggtgctg
ccaagctgtgccgacctctttgtgtactacaagcggtgccttgtgcagtgttcccagctg
agccgtggcgaggccttgctggggctggccgccgtattccagaagcacctgcaggaatat
gccacacgcgtcctccaacacatcctgcctaagactcccagtggcagtgtgggtctcacc
atctcgagcctgctcaaggacagagatgcgactgacacaacacgtttcactgctgatgag
ctgggcctcatctgtaccgtgctgagcaccgccgagtattgccttgccaccacacagcag
ttggaggaaaagctgaaggagaaagttgagcccagcctagcggacaaaattaacctcgtg
gctgagacagactccttcagcgcggtgatctcacattgtattcagcttctcgtccaggac
ttggactcagcctgtgacccggcactcacagccatgagcaagatgccctggcagaatgtt
gagcacgtgggcgatcagagtgcctacgtcacttccgttgtgggtcacgtgaagagtaac
gtgcctgtggtccgccattgtctggcgtgcactcgtaaatacttcactcagttctgtctc
aagttcgcaagcgccttcattcccaagttcatcaatcagctgttcaagtgcaagcccgtc
agcatggtgggagctgagcagctcctactagacactcactctctgaagacggcgttgctg
gagctgccctctgtgggtgccgctgtggtgaggaaagctccagcagcttacaccaaggtg
gtggtcaagggcatgaccagggcagagatgatactcaagctggtgatgtctccacatgaa
ccaccacaggtgtttgttgacaactttatgaagctgctgagtgacagcggcgctccggac
acgttccagagggtgttggacatgaagggcctgaaacggagtgagcagagctccatgctg
gaactgctccgccaccggcaccaccaccagcccggtggtgccggtggtgccggtggtggc
ggtggtggtggcggtggtggtgtggtgcctctcatcccccgcgggggggggggtgctggt
gggggggggccccccccccctcactcgggggcccccctggggctgtcggcggggacgagt
cctgaacaggagaactcgcgcatccggcggctcgagaagctgatcaagaaacggctctga
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