Petromyzon marinus (sea lamprey): 116957596
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Entry
116957596 CDS
T09614
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
KO
K10839
UV excision repair protein RAD23
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03420
Nucleotide excision repair
pmrn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116957596
09124 Replication and repair
03420 Nucleotide excision repair
116957596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pmrn03051
]
116957596
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116957596
Proteasome [BR:
pmrn03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
116957596
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
116957596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Crinkler
New_glue
UBA_9
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
116957596
NCBI-ProteinID:
XP_032835729
UniProt:
A0AAJ7XI99
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Position
78:complement(1091210..1125549)
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AA seq
475 aa
AA seq
DB search
MIVTLKTLQQQTFRVEIEGTRTVRELKVRIEEERGSEAFPADSQKLIYAGKILSDESAVC
DYNIDEKSFVVVMVTKPKPAPPPIPPAPTEAPPPIPPAPATTPATTPPATPTPGPATPTT
PMQGQATPTVATSTSNPATPSATLEEKEAGPEVVEATPTGEGPGVTETTPPGEEATPTAE
EEQEVAASDIGNQNLAKEAASALVTGQAYEQMVQEMVSMGYERSKVVSALRASYNNPDRA
VEYLLTGIPGSSGSAPESVHAGAPSLTVDVPTDPTTTSSTSTTTTTTSSSTTSSTPSTTT
TTTTSSTSTPAAAAAASQPSPQRRQNTAASNPLEFLRSQPQFQQMRVVLQQNPSLLPALL
QQLGRENPQLLQQISQHQEQFISMLNSPSEGGGGDGDDGDDGDDGGDGDGLGGAAGSGGG
GVNYIQVTPQEKAAIERLKDLGFPEGLVVQAYFACEKNENMAANFLLQQQGDGDD
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgacgctgaagacgctccagcagcagacattccgtgtggagatcgaggggacg
agaacggtgcgggagctgaaggtgaggattgaggaggagcgaggcagtgaggccttccca
gccgactcccagaagctcatctacgccggtaagattctgagcgatgagtctgcagtctgt
gactacaacattgacgagaagagcttcgtggttgtcatggtaaccaagcccaagccagcc
cctccccccatccccccggctcccaccgaagcccctccccccatccccccagccccggca
accaccccggcaaccacccccccagccacgcccacccctgggccggccacgcccaccacg
cccatgcaagggcaggccacgcccaccgtggccacgtccacctccaacccagccacgccc
tccgctaccctagaagaaaaagaggcagggcccgaagtggtggaggccacgcccacgggg
gaggggcccggggtgacggagaccacgcccccaggggaggaggccacgcccacagcagag
gaggagcaggaagtggctgcgagtgatattggaaatcaaaacctggcaaaggaggctgca
tcggctctggtgactggccaggcctatgaacagatggtacaagagatggtgtctatggga
tatgaaagatccaaagtcgtttctgctctgagggcaagctacaacaacccagacagagcg
gtggaatacctgctaacgggcatcccaggttcttcgggatcagctccggaatccgttcat
gctggggctccgtctcttaccgtggatgtccccacggatcccaccaccacctcctccacc
tccactaccaccaccaccacctcttcctcaaccacctcctcaaccccctcaaccaccacc
accaccaccacctcctcaacctcaacgcctgcagcagcagcagcagcttcacagccttca
ccccaacggagacagaacacagccgcatcgaatcctctggagttcctgcgctcccagccc
cagtttcagcagatgagggtggtcctgcagcagaatccctccctgctccccgctctgctg
caacagctgggacgggaaaatccccaactcctgcagcaaatctcccagcaccaggagcag
ttcatctccatgctgaactctcccagcgaagggggcggcggtgatggcgacgatggcgac
gatggcgacgatggcggtgatggcgatgggctgggaggtgcggcggggagtggaggcggt
ggagtgaattacatccaagtcacgccccaggagaaagcggcgatcgagaggctgaaggat
ctgggcttcccagagggactcgtagtccaggcgtacttcgcctgtgagaagaatgagaac
atggccgccaatttcctgctccagcagcagggagatggtgatgactag
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