Petromyzon marinus (sea lamprey): 116957636
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Entry
116957636 CDS
T09614
Symbol
DCP2
Name
(RefSeq) m7GpppN-mRNA hydrolase
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116957636 (DCP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116957636 (DCP2)
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
116957636 (DCP2)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116957636 (DCP2)
mRNA degradation factors
5'-3' decay
Decapping complex
116957636 (DCP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
116957636
NCBI-ProteinID:
XP_032835791
UniProt:
A0AAJ7XIL0
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All DBs
Position
79:734989..777114
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AA seq
403 aa
AA seq
DB search
MDARKSAIPGSVLNDLCSRFILHVPSEEREAPVRLCFQIELAHWFYLDFTREGDTSLPLL
SLTDFARAVFAHCPFLLGGNEDVASVLQDWKEYKMGVPTYGAIILDPSLQHVLLVQGYLA
KSTWGFPKGKVNEDEAPHDCAVREVLEETGFDIRDRIDLREFIELRVNEQLVRLYIIPGV
PRDTAFTPRTRKEIRSIEWFLIEDLPSHRNDVTAKTRTGLGPNKFFMTIPFIKHLREWIG
SHSPSPADSGWVKQPSHSSSSSTTRQWEPKLMSKQRQQRYFIQQTQNEFNEILKVKGQPR
PRNQNSPIHKKRHSQVPPRLQAKNSSTVAAASSVDAAPEPLPSWSLTQSPGVPGSLPMAT
TTGTATTATTAVATTAAPPRIFFSPSMATFCFDWAPVMHCFDS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgagaaaatcggcgattcccgggagcgtcctcaacgatttgtgcagccgcttt
atcctgcacgtgccgagtgaggagcgagaggccccggtgcgactctgctttcagatcgaa
ctggcccactggttttacttggacttcacgcgagagggagacaccagcctgccgctgctc
agcctcacagacttcgcccgcgctgtcttcgcccactgccccttcctgctgggcggcaac
gaggacgtcgcctcggtgctgcaggattggaaggagtacaagatgggggtgcccacctac
ggcgccatcatcctggaccccagcctgcagcacgtgctgctggtgcagggctatctggcc
aagtctacgtggggtttccccaaggggaaggtgaacgaggatgaagctcctcacgactgc
gccgtgcgagaggtgctggaggagaccggcttcgatatccgcgaccgcatcgacctgcgg
gagttcatcgaactgcgcgtcaacgagcagctggtgcgtctctacatcatccccggggtg
cccagggacaccgccttcaccccgcgcacgcgcaaggagatccggagcatcgagtggttc
ctcatcgaggacctcccctcgcaccggaacgacgtgacggccaagactcgcaccggcctg
ggccccaacaagttcttcatgaccatccccttcataaagcatctgcgagaatggatcggt
tctcactctccatctccggcagacagcggttgggtcaagcagccctcacacagcagcagc
agcagcaccacgcggcagtgggaacccaagctgatgtcgaagcagcggcagcagagatat
ttcattcaacaaacccagaatgagttcaacgagatcctgaaggtgaagggtcagccccgg
cctcgcaaccaaaattcacccatccacaaaaagagacacagccaggttcctccgaggctt
caggcgaagaattcttctaccgtcgcagccgcctccagcgttgacgcagctccggaaccg
ttgccctcttggagcttgacacagtccccgggcgtcccagggagcctgccgatggccacc
accaccggcaccgccacaaccgccaccactgcagttgccaccaccgcggcgccgccacgc
atcttcttttctcctagcatggcgacgttctgcttcgactgggctccagtgatgcactgc
ttcgactcctag
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