Petromyzon marinus (sea lamprey): 116957752
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Entry
116957752 CDS
T09614
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03420
Nucleotide excision repair
pmrn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116957752 (ERCC8)
09124 Replication and repair
03420 Nucleotide excision repair
116957752 (ERCC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116957752 (ERCC8)
03400 DNA repair and recombination proteins [BR:
pmrn03400
]
116957752 (ERCC8)
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116957752 (ERCC8)
DNA repair and recombination proteins [BR:
pmrn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
116957752 (ERCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_RIG_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_LRRK2
Beta-prop_WDR19_1st
WD_LRWD1
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
116957752
NCBI-ProteinID:
XP_032835986
UniProt:
A0AAJ7XIS6
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All DBs
Position
35
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AA seq
405 aa
AA seq
DB search
MLGLLSSRRNGADEPPRLRVAESTRRVFNLELSSERDVECVHSSGVNVLDIDQAENKYML
SGGADGVIAIYNLENVSQKPQYTCKAICTVGRSHAHVHQYSVETVQWYTHDTGMFLSSSF
DKTLKAWDTNALEPAEIYTFSEKVYCHHMSPIATQHSLIAVGTSGSKVQLCDLRTGSSTH
ILNGHRNAVLAARWSTRHEFVLATGSRDNSAKLWDVRKATGCLLTLDQHKGEAWGGSNSS
SSRDRSGTQTSHGGHVNGLCFTKDGLHLLTLGTDDRLKLWRTDTGTNLLVNYGRVSNGSR
KGVKFAMSADCSPDLVFIPMGSHVTAFEIHSGRVHTQLSGHYNKVNCCEYYSDFQELYSG
GNDSNILVWVPNMGRTQPEEEETDKKSGSKQRSGFQDSWSSSDED
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtctcctgtcgtcgcggcgcaacggagcggacgagccgcccaggctgcgcgtc
gccgagtccacgcgaagggtgttcaacctggagctgagcagtgagcgggacgtggagtgc
gtgcacagcagtggcgtcaatgtcctcgacatcgaccaagcagaaaataagtatatgctc
tctggaggagctgatggagtgattgccatctacaacctggagaatgtctcccagaaacct
caatacacatgcaaggccatctgcacagtgggcaggtcccatgcacatgtgcaccagtac
agtgtggagacggtgcagtggtacacccacgacacaggaatgtttctgtcgagctccttt
gacaagacactcaaggcatgggacaccaatgctttggagcctgcagaaatttacacattt
tcggaaaaggtttattgtcaccatatgtctccaattgcaacgcagcactccctaattgca
gttggaaccagtggcagcaaagtgcagctgtgtgacctgagaacgggctcgagcactcac
atcctgaacggtcaccggaacgcggtgcttgcagctcgctggtcgacgcggcacgagttt
gtcctggctactggaagtcgtgataacagtgcgaagttgtgggacgtgaggaaggccacg
ggctgtttgctcaccctggatcagcacaagggcgaggcctggggaggctccaattcctcg
agcagcagagaccgcagcggaacgcagacatcgcacggcggacacgtcaacgggctctgc
ttcaccaaggatgggctccacctcctcaccctgggcacagacgaccgcctaaagctctgg
aggaccgacacgggcacaaatcttctggtgaactacggccgggtcagcaacggttcccgc
aaaggggtgaagttcgccatgtcggcagactgctcaccggacctcgtgtttattccgatg
ggcagtcacgtaactgcgtttgagatccactccgggcgggtacacacccagctcagtggc
cactacaacaaggtcaactgctgtgaatattattcagacttccaggagctgtatagtggc
ggtaatgacagtaacatcctggtctgggtgcccaacatgggcaggactcaaccggaggag
gaagaaacagacaagaagtctggaagcaagcagcgcagtggcttccaggattcctggagc
agtagcgatgaagattaa
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