Petromyzon marinus (sea lamprey): 116957777
Help
Entry
116957777 CDS
T09614
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116957777 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116957777 (THOC6)
03041 Spliceosome [BR:
pmrn03041
]
116957777 (THOC6)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
116957777 (THOC6)
Spliceosome [BR:
pmrn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116957777 (THOC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WDR55
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IP5PC_F
Beta-prop_SPT8
WDR54
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
116957777
NCBI-ProteinID:
XP_032836019
UniProt:
A0AAJ7UGS8
LinkDB
All DBs
Position
38
Genome browser
AA seq
332 aa
AA seq
DB search
MAATAADIQHTLEMLHMTVFSQSFSPCGKYLAAGNSYGRVAVFSLSLALGLDATEESRKP
IYTFTAHESPVYSLVSTDRLLISAGNGLVKAWNWSDLIKKTAKEVWSKQPPYKMGVDVPE
INALLLNEKDNSLYLGCGDCNVYNMDLESGTCKLFLEGHTDYVHCLALRDHVSEVLSGGE
DGTVRHWDVRTGNLVQCVEIFKYQECARSEFGKWIGCLATDSDWMICGGGPALSLWHLRS
LTPTTVFPLNGSHHAAMFHQDLIISAGSGHSIDHCQVNGEVRARIPVSTPSVYSLQVNHN
SSENKVLSAAGSSHKLEVFTNLGYRAFCLAFT
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaccgcggccgacatccagcacacgctggagatgctgcatatgactgtgttc
tcacagagcttctcgccgtgtgggaaatacctggcggcgggaaacagctacggacgcgta
gcggtgttcagtcttagcttggcgcttggtttggatgccacggaggagagtcgaaaaccc
atatacaccttcacagcacatgagagtccagtgtacagccttgtttctacggatcggctg
ctcataagtgccggcaatggattggtgaaggcctggaactggagcgacttgattaagaag
accgcaaaggaggtgtggtcaaagcaaccgccttacaagatgggagtggacgtacctgag
atcaacgctcttctgctgaatgagaaggacaactcgctgtacctgggctgtggagactgc
aacgtgtacaacatggatctcgagtctggcacatgtaagcttttcctggagggccacaca
gactacgtgcactgtctggcgctcagagaccatgtgagcgaggtgctctcgggcggggaa
gacggcactgtaaggcactgggatgtcaggaccggaaacctcgtgcagtgtgtggaaatc
ttcaagtatcaggaatgtgcccggtctgagtttggaaagtggattggttgcttggctacg
gactccgattggatgatctgcggtgggggacccgcgctcagcctgtggcacctgcgctcg
ctcacccccaccacggtcttcccgctcaacggctctcaccatgcagccatgtttcaccag
gacctgatcatctcggctggttcgggccactccatcgaccactgccaggtgaacggggaa
gtccgcgcgcgcatcccggtctccaccccctctgtctactctctccaagtcaaccacaac
tcctccgaaaacaaggttctatctgctgctggtagcagccacaagctggaggtgtttacc
aaccttgggtaccgggccttctgcctcgccttcacctag
DBGET
integrated database retrieval system