Petromyzon marinus (sea lamprey): 116957882
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Entry
116957882 CDS
T09614
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116957882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmrn03021
]
116957882
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116957882
Transcription machinery [BR:
pmrn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116957882
Coactivators
SAGA/TFTC/STAGA complex
116957882
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116957882
STAGA complex
116957882
TFTC complex
116957882
SAGA complex
116957882
SLIK complex
116957882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
GRP
Motif
Other DBs
NCBI-GeneID:
116957882
NCBI-ProteinID:
XP_032836209
UniProt:
A0AAJ7XIQ9
LinkDB
All DBs
Position
64
Genome browser
AA seq
736 aa
AA seq
DB search
MAEEKKSRVSGTLLPVESVKLIGESVGLAQMSEDACQLLAEEVGFRLKELSQEAAKFMRH
GKRRKLSTSDLDHALKIRNIEPLYGFQSAEFIPFRYASGGGRELFFYEEQEVNLSDMINT
PLPRVPLDISLKAHWLSIEGVQPSIPENPPPTPKEQQKKEATEPMRIMKPGQSDGNLKPG
HKASTSGPSDGKGKDKRKVPAEGAAVRVKARATHELSVEQQLYYKEITEACVGSCESKRA
EALQSIASDPGLYQMLPRFSTFISEGVRVNVAQNNLALLIYLMRMTKALLDNQTLYLEKY
LHELIPAVVTCIVSRQLCLRPDVDNHWALRDFAARLMAQICKNFSSTTNNIQSRSTKTFV
KSLHDDKTPWTTRYGCIAGLAELGFDVIKTLVIPRLPAEGDRIRQVLEGPVISNIDKIGA
QHVQTLLLKHCAPVLVKLRPGPDSAEAYKADYGHLGPLLCTHVTKARVQVSSSSSSPTAQ
GLQLNRSTLTFTHPQVRGAIGAPHSLASPQTALPTRSSTIIKVPGSGGGALFHVHAGGER
RVWAAPQVHRCVGPHRPHTDPTDVLLHLVTLHLVIRHCLVVFIVVGDDGDDRHAHRGEAA
RAESEAGAGHHRLGAALLLVLLVLLLLVVVVILLVARRDRQAGSAGTGARGGVVLAGRRH
GKEQQRAAAHRRQAGGRRRPGHGGAAQARRAGGRRRSRRHEQRGDGDGGGGDGRCRWRRW
RHGLGDGARWDGLRCA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagaagaagtcgcgcgtgagcggcacactgctgcccgtcgagtcggtgaag
ctcatcggcgagtccgtgggactcgcgcagatgtcggaggacgcgtgtcagctgctcgca
gaggaggtcggcttccgactcaaggagctgtcgcaagaagcggccaaattcatgcgccac
ggcaagcggagaaaactgagcacatccgacctagaccacgccctgaagatacgcaacatt
gagccactgtacgggttccagtcggccgagttcatcccgttccgctacgcgagcggagga
gggcgggagctgttcttctacgaggagcaggaagtgaacctgagcgacatgatcaacacg
cctctcccccgcgtgcctctcgacatcagcctcaaggctcactggctgagcattgagggt
gttcagccgtccattcctgagaaccctcctcccacgcctaaggagcagcagaagaaggag
gcgacggagcccatgaggatcatgaagcccggacagagcgacgggaacctcaagcctggg
cacaaggcctccacgagcgggccctccgacggcaagggcaaggacaagaggaaggtgcca
gcggagggcgccgcggtgcgcgtgaaagcgcgcgccactcacgagctctccgtggagcag
cagctctactacaaggagatcacggaggcctgcgtcggctcctgcgagtccaagcgagcg
gaagcactgcagagcatcgctagcgacccggggctgtaccagatgctgccacgattcagc
accttcatctctgagggagtgcgcgtgaacgtcgctcagaataacctggctctgctcatc
tacctcatgaggatgaccaaggccctgctggacaaccagaccctctacctggagaaatac
ctgcacgagctgatccccgcggtggtgacgtgcatcgtgagccggcagctctgcctgcgc
cccgacgtggacaaccactgggccctgcgcgactttgccgcccgcctcatggcccagatc
tgcaagaacttcagctccacgacgaacaacatccagtcccgctcgaccaagaccttcgtg
aagagtctgcacgacgacaagacgccgtggacgacacgctacggctgcatcgcgggactc
gccgagctcggcttcgacgtgattaagacgctcgtcatcccgcgcctccccgccgagggc
gaccgcatccggcaggtgctggagggcccggtgatcagcaacatcgacaagatcggggca
cagcacgtgcagacgctgctactgaagcactgcgcgcccgtgctggtgaagcttcgtccg
ggccccgacagcgcggaggcctacaaggcggattatgggcacctgggccccctgctgtgc
acccacgtcaccaaggcccgcgtgcaggtcagctcctcctcctcttcacccaccgctcag
ggcctgcagctcaaccgctccacgctcaccttcactcacccgcaggtgcgtggcgccatc
ggtgcccctcactctctcgcgagcccccagacggcgctgcccacccgctcctccaccatc
atcaaggtgccaggctcgggggggggggctctattccacgtccatgccgggggggagcga
cgcgtctgggctgccccccaagttcatcgttgtgtcggcccccaccggccccacacagat
cctaccgatgtcctcctccacctcgtcaccctccacctcgtcatccgccactgcctcgtt
gtcttcatcgttgtcggcgacgatggcgacgaccggcacgcccaccgtggtgaagctgct
cgcgccgagtcagaagctggcgccgggcatcaccgtctcggtgctgccctcctcctcgtc
ctcctcgtcctcctcctcctcgtcgtcgtcgtcatcctcctcgtcgctcgacgtgaccgg
caagccggcagcgccggcaccggcgcccgtgggggcgtcgtccttgccgggcggcgtcac
ggcaaggagcagcagcgtgccgcagctcatcgccgtcaagcaggagggcgccgacggcca
ggccatggtggtgctgcgcaagccaggcgcgccgggggcaggaggcggagccggcgccac
gagcagcgcggtgacggtgacggtggcgggggcgacggccgctgccggtggcggcggtgg
cggcacgggctcggggacggcgcccggtgggacgggctccgctgtgcctaa
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