Petromyzon marinus (sea lamprey): 116957914
Help
Entry
116957914 CDS
T09614
Symbol
TRDMT1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmrn03016
]
116957914 (TRDMT1)
Enzymes [BR:
pmrn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
116957914 (TRDMT1)
Transfer RNA biogenesis [BR:
pmrn03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
116957914 (TRDMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
SpoIIE
Nha1_C
Motif
Other DBs
NCBI-GeneID:
116957914
NCBI-ProteinID:
XP_032836257
UniProt:
A0AAJ7XJB3
LinkDB
All DBs
Position
66
Genome browser
AA seq
466 aa
AA seq
DB search
SGGGGSVGSAVSDRESGGGVSGGGSDGVSGGGSDGSIGSVSGGGNDGSSGGSDGDSAGPR
PLRVMELFSGVGGLHYAVRLSGAPAAVVAALDVSDVANAVYRRNFPRTTLLARSLESLPD
AALAALRPDALVAGPPCQPFARRGRRLGLDDRRCAGLARLVALLRRLGPRYLLLENVAGF
EGSGARRALHEALDARGGYAERQEFLLGPAAVGVPNSRLRYFLVARRGGGPGFQFRAAGG
VMNRLPADAEGGGAPSPLALLPAGFGAEPWQGGGKEARTAADWAPPPPPCSYKSDAPAEA
ARKMAQDRDANVRSLREFLDPDDDDDEAAPRRYARDSLLVPPRVLRRYGRLLDIVTPDSR
RSNCFTGAYGRYVEGSGSVLLADAGANVAAAFREDEEEEGEEGEERTRRLAALGLRYFSP
GEVARIHGFPDGFSFPEGLSLRKRWQLLGNSVNVRLVAELLRLTLR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
agtggtggtggtggtagtgtcggtagcgccgtgagtgaccgtgagagtggtggtggtgtg
agtggtggtggtagtgacggtgtgagtggtggtggtagtgacggtagtattggtagtgtg
agtggtggcggcaatgacggtagcagcggtggtagcgacggcgactccgcgggcccccgc
ccgctgcgcgtcatggagctgttcagcggcgtgggcggcctccactacgccgtgcgcctg
agcggcgccccggccgccgtggtcgccgccctcgacgtgagcgacgtggccaacgccgtg
taccgccgcaacttcccgcggacgacgctcctcgcgcgctccctcgagtcgctccccgac
gccgccctcgcggccctgaggccggacgccctcgtcgctggacccccgtgccagccgttc
gcccggcgcggccgccgcctcggcctggacgaccgccgctgcgcgggcctcgcccgcctc
gtggcgctgctgcgccgcctggggccgcgctacctcctgctggagaacgtcgcggggttc
gagggctccggggcccggcgggcgctccacgaggcgctggacgcccgcggcggctacgcc
gagcggcaggagttcctgctggggcccgccgcggtcggggtgcccaactcgaggctgcgc
tacttcctcgtcgcccggcggggcggggggcccgggttccagttccgcgccgccggcggc
gtcatgaaccggctgccggccgacgcggagggggggggggcgccgtcgccgctggcgctg
ctgccggcggggtttggggcggagccgtggcagggaggcggcaaggaggcccggacggca
gcggattgggcgccaccaccgccgccgtgcagctacaagagcgacgctccggccgaggcc
gcccgcaagatggcgcaggaccgcgacgccaacgtgaggagcctccgcgagttcctcgac
cccgacgacgacgacgatgaggcggccccccggcgctacgcccgcgactcgctgctggtg
ccgccgcgggtgctgcgccgttacggccgcctgctggacatcgtgacgcccgacagccgc
cgctccaactgcttcacgggcgcctacggccgctacgtggagggctccggctcggtgctc
ctcgccgacgccggcgccaacgtcgccgccgcgttccgggaggacgaggaggaggagggg
gaggagggggaggagcggacgaggagactcgcggcgctggggctgcgctacttcagcccc
ggcgaggtcgcccgcatccacggcttccccgacgggttctcgttccccgaggggctgtcg
ctgcgcaagcgctggcagctgctggggaacagcgtcaacgtccgcctcgtcgcagagctg
ctgcgcctcacgctgcgctga
DBGET
integrated database retrieval system
