Petromyzon marinus (sea lamprey): 116958300
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Entry
116958300 CDS
T09614
Symbol
CLDN16
Name
(RefSeq) claudin-16
KO
K06087
claudin
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03272
Virion - Hepatitis viruses
pmrn04382
Cornified envelope formation
pmrn04514
Cell adhesion molecule (CAM) interaction
pmrn04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
116958300 (CLDN16)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116958300 (CLDN16)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116958300 (CLDN16)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116958300 (CLDN16)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmrn03037
]
116958300 (CLDN16)
04147 Exosome [BR:
pmrn04147
]
116958300 (CLDN16)
Cilium and associated proteins [BR:
pmrn03037
]
Other cilia and associated proteins
Stereociliary proteins
116958300 (CLDN16)
Exosome [BR:
pmrn04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
116958300 (CLDN16)
Exosomal proteins of colorectal cancer cells
116958300 (CLDN16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DuoxA
Motif
Other DBs
NCBI-GeneID:
116958300
NCBI-ProteinID:
XP_032836741
UniProt:
A0AAJ7UHU2
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All DBs
Position
75:complement(58978..117115)
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AA seq
191 aa
AA seq
DB search
MVNADDSLEVSQKCRGLWWECVTNAFDGIRTCDQFDSILAEHPLKIVLSRSLILTADILA
CFACIILILGLDCVRVLSNEPRIKTRICYTAGFIYLLAGIPGMVGSVWYAVDVYVERSTL
VQQNVFLGIQYEFGWSCWLGMAGSMACILAGIVLTCCVYLFRDANAARLHRSPYVAPRTS
LGKMYAMASHV
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacgccgacgacagcctcgaggtgagccagaagtgccgtgggctgtggtgggag
tgtgtgaccaacgccttcgatggcatccgcacctgtgaccagttcgactctatactggca
gagcacccactgaagatcgtgctgtcccgctccctcatcctcaccgctgacatcctcgcc
tgcttcgcctgcatcatcctcatcctgggcctcgactgcgtgcgagtgctcagcaatgag
ccccgaatcaagacccgcatctgttacacggccggcttcatctacctcctcgccggcatc
cccggcatggtggggtccgtgtggtacgccgtggacgtgtacgtggagcgctccacgctg
gtgcagcagaacgtcttcctgggcatacagtacgagtttgggtggtcctgctggctgggc
atggccggctccatggcctgcatcctggccgggatcgtcctcacctgctgcgtctacctg
ttcagggatgcgaacgccgcccgcctgcacagatccccgtacgtcgctccacgcacctcc
ctgggcaagatgtacgccatggcttcccacgtgtga
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