Petromyzon marinus (sea lamprey): 116958338
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Entry
116958338 CDS
T09614
Symbol
RARS1
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116958338 (RARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmrn01007
]
116958338 (RARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmrn03016
]
116958338 (RARS1)
03029 Mitochondrial biogenesis [BR:
pmrn03029
]
116958338 (RARS1)
Enzymes [BR:
pmrn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
116958338 (RARS1)
Amino acid related enzymes [BR:
pmrn01007
]
Aminoacyl-tRNA synthetase
Class I (G)
116958338 (RARS1)
Transfer RNA biogenesis [BR:
pmrn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
116958338 (RARS1)
Prokaryotic type
Other AARSs
116958338 (RARS1)
Mitochondrial biogenesis [BR:
pmrn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
116958338 (RARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
Glyco_transf_4
HemN_C
Retinal
tRNA-synt_1
tRNA-synt_1e
SR-25
tRNA-synt_1g
Motif
Other DBs
NCBI-GeneID:
116958338
NCBI-ProteinID:
XP_032836785
UniProt:
A0AAJ7UI52
LinkDB
All DBs
Position
76
Genome browser
AA seq
720 aa
AA seq
DB search
MAEVVDRFKNRLQQQDLEISRLSAEVLSLRGAVVDAGGASGSTCAPPGVERLREENGKLL
YRLRHLKRCLSDEVMKQRPQPISSTSSSTSSSSATSSSTSSSSPATGPRGDRDGGDGADV
DGGMVNVAARLCTAFASAVSAAFPGLAVPPVAIAPSKPQQQQQQQQRIADYQCNSAMAIA
QLLKAKGQKVSPKDVGAAIVSHLPASDLVEHVEVVGPGFINVYLDTAFLARQLTRLLLHG
VSPPNTGARKKVVIDFSSPNVAKEMHVGHLRSTIIGDSTSRLYEFLGHEVLRLNHIGDWG
TQFGMLIAHLVDRFPNYTEQPPPIADLQAFYKESKLRFDEDPSFRSRAYEYVVRLQSKEE
AILRGWSLICDISRREFQKIYDSLGVRLEERGESFYQSLMQDVVEELKQKGLLQEDEGRL
VLFAPGCAVPLTVVKSDGGFTYDTSDLAALRHRIHTERADVIIYVTDSGQASHFEAVFSA
ARLAGWYQEGGGVRVVHTPFGVVLGEDRKKFKTRSGETVRLAELLDEGLRRAGDKLQEKG
RHQVLTPEELEAARRAVAFGCIKYADLAHSRTNDYVFSFAKMLDDRGNTAVYLLYAYTRI
RSIARVAHVDPAQLRSEARRVGGVALGHASERRLARAILRLPEVLARTADDLQLHTLCDF
LYELAGTFTDFYDACYCVEKDRSTGEVVKVNMSRLLLCEATAMVMETCFHILGLTPVQRM
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagtcgttgaccggttcaagaaccggttacagcagcaggatctggagatcagc
cgtctctcggccgaggtgttgtctctgcgtggggccgtggtggacgccggcggcgcctcc
gggtcgacctgtgctcctcctggggtggagcgtctccgcgaggagaacgggaagctgctg
taccgcctccgccacctcaagcggtgcctgagcgacgaggtgatgaagcaacggcctcag
ccaatctcctccacctcctcctccacctcctcgtcctccgccacctcctcctccacctcc
tcctcgtccccggccaccggcccccgcggcgaccgcgatggtggcgacggtgccgacgtg
gacggggggatggtgaacgtcgccgcccggctctgcactgcgtttgcgagcgctgtgagc
gccgctttccccggcctcgccgtgccgccggtagccatcgctccctcgaagccgcagcag
cagcagcagcagcagcagcggatcgccgattaccagtgtaacagcgccatggccatcgcg
cagctgctgaaggctaaaggtcagaaggtcagccccaaggacgtgggggcggccatcgtg
agccacctcccggccagcgacctcgtggagcacgtggaggtcgtggggccaggcttcatc
aacgtgtacctagacacggcgtttctggcacgccagctcactcgcctcctccttcacgga
gtcagcccccccaacacaggagcccgtaagaaggtcgtcattgacttctcgtccccgaac
gttgccaaggagatgcacgtgggtcacctccgctccaccatcatcggggacagcaccagc
cgcctatacgagttcctggggcacgaagtgctgcggctgaaccacattggcgattggggc
acccagtttgggatgctgattgctcacctggtggaccgcttccccaactacacggagcaa
cctccacccatagctgacctgcaggcattctataaggagtcgaagctgcgctttgacgag
gacccgtcgttccggagccgggcctacgagtacgtcgtgcggctgcagagcaaggaagag
gccatcctgcggggctggagcctcatctgtgacatctcacgacgagagttccagaagatc
tacgactctctgggcgtgcgacttgaggaacggggggagtcgttctaccagagcctcatg
caggacgtggtggaggagctcaaacagaaagggctgctgcaggaggacgagggccgcctg
gtgctgtttgcgccgggctgcgccgtgcccctcaccgtggtcaagtcggacggcggcttc
acctacgacacgtcagacctggccgcactgagacaccgcatccacacggagcgtgccgac
gtcatcatctacgtcactgatagtgggcaggcttcccactttgaggcggtgttctctgct
gcccgcctggctggctggtaccaggaggggggaggggtgcgcgtggtgcacaccccgttc
ggggtcgtgctcggggaggacaggaagaagttcaagacgcgctccggcgagacggttcgc
ttggccgagctgctggacgagggcctccgtagggccggagacaaactacaggagaagggc
agacaccaggtgctgacgccggaggagctggaggctgcccggcgtgcggtggcgtttggc
tgcatcaagtacgccgacctggcccacagccgcaccaacgactacgtcttctcattcgcc
aagatgctggatgaccgcggcaacaccgccgtgtacctgctctacgcgtacactcgcata
cgctcgatagcgcgagtggctcacgtggacccggctcagctgcgctccgaggctcgcaga
gttggcggcgtggctctgggccacgccagcgagcgccggctggcccgtgccatcctgcgc
ctgcccgaggtgctggcccggacggcggacgacctgcagctgcacacgctgtgcgacttc
ctgtacgagctcgcaggcaccttcaccgacttctacgacgcctgctactgcgtggagaag
gaccgcagcaccggtgaggtggtgaaggtgaacatgagccgcctgctgctgtgtgaggcc
accgccatggtgatggagacttgcttccacatcctgggactcacgcccgtgcagcgcatg
tga
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