Petromyzon marinus (sea lamprey): 116958360
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Entry
116958360 CDS
T09614
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta-like isoform X1
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116958360
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmrn01009
]
116958360
Enzymes [BR:
pmrn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
116958360
Protein phosphatases and associated proteins [BR:
pmrn01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
116958360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
Fn3_Dep-1_4th
Ig_ILCR1
Fn3_Dep-1_2nd
Ig_DSCAM-DSCAML_C
bMG1
Pur_ac_phosph_N
Tc-R-P
PTP-SAK
DSPc
MobL
PTP-NADK
Y_phosphatase3
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
116958360
NCBI-ProteinID:
XP_032836812
UniProt:
A0AAJ7XJU7
LinkDB
All DBs
Position
3:complement(8874980..8913320)
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AA seq
1428 aa
AA seq
DB search
MRSHTDTMKMGSAWPGSVKHLILLAVLLIKDGFGQTTTNAPVTTTTIATTTPEPPLDVNV
TASETTVELTWRDRAACDESNYNVTYVTNSPSAATGSRVRTVPSTCITSSDFYLANLTNL
IPGAIYTLIIWRDSGVRWNSITRTIPAPVSNVTLDNNGSTNSLHLSFQSAIGDVDSYAVD
LVDGQSGSVVQADSLQNSTTEKTFRGLTAGRLYRAEVTTVSGDLNSTGAGKEMCTVPHTV
ENVTLENEGTTNSLTVNFTSATGDVTQYTVELVDTTIGSVVKSENLSNDTTVHIFNGLIP
GQRYQVHVTTVSGNCTSPPVTDEMCTVPETVQSVTLENNGTTNSLIVNFTSATGDVTQYP
VELVDTTNGSVVKSTNLLNNTTVYTFNGLIPGRRYKVHVTTVSGDCTSLPVTAEMCTVAE
TVQSITLENEGTTTSLTVNFTSATGDVTQYTVELVDTTNESVVMSENVSNDTTVYIFNGL
IPGRRYQVHVTTVSGNCTSPPVTDEMCTVPETVQSVTLENNGTTNSLTVNFTSATGDVTQ
YPVELVDTANGSVVKSDNLSNDTTVYIFNGLIPGRRYQVHVTTVSGNCTSPPVTDEMCTV
PETVQSVTLENIGTTNSLTVNFTSATGDVTQYPVELVDTTNRSVVKSTNLLNDTTVYIFN
GLIPGRRYQVHVTTVSGNCTSPPVTDEMCTVPKTVQSVTLENNGTTNSLTVNFTSATGDV
TQYKVELVDTTNRSVVKSTNLLNDTTVYIFNGLIPGRRYQVHVTTVSGNCTSPPVTDEMC
TVPETVQSVTLENEGTTSLTVNFLSATGDVTQYTVELVDTANGFVDKSVNLSNDTTVHSF
NDLIPGRRYQVHVTTVSGNCNSTEADAEMCTDPSLVTNLNLNTHHNKNLSVSFDKAYGNV
DNYTVILTNGNTSLDSIKHLNPDQTECSFENLQPCTKYHVSVTTSSSFCRNTLESRPQLT
YPNQVGKVTPKVKNYNHIDIQWVQPEGNVEFFNVVLSKDSSVHWAGVYNSSESSHATGAL
AYSTTYNVLVEACCQNLCSPDVNVYVKTCPNVILIACLTTAMIVVIACAVSGFLFYRRRK
DKEPDRVPTNKLTSMRKRNPVPFSKFPDYYKKREADSGYLFSEEYQELSSVGKGQAMEAA
TLAENRTKNRYTNILPFDVTRVKLASVEDIPHSDYINANYIKGHSSSREYIAAQGPLAGT
REDFWRMVWEQKVNQIVMLTNCVERGQPKCECYWPMDITPVRYGDIGLVMEWDKPSPEWT
IRHLVVKNHKTDEKRSLYHFHFTAWPDHGVPDTTDSLTNFVRLFRTHVNTTNKGGPIVVH
CSAGVGRTGTFISLDHLLQDIDKKPEIDIYGIVHDMRMSRVLMVQTEMQYIFIHKCILKV
LEEEKKKDSDYEVIYSNEGIYENNIVDNFHMEKSNQNNNENHTFLTDK
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgagaagccacacagatacgatgaagatgggatcggcgtggccggggtcggtaaagcac
ctgatcctactggccgttctgctcataaaggacgggttcggacagactactactaacgca
ccagtcaccaccaccaccatcgccaccaccacacctgagccccccctggatgttaatgtt
actgcgagtgagacgactgtggaattgacgtggagagacagagccgcgtgcgatgagagc
aactacaacgtcacctatgtcaccaactctcctagtgcagcgactggctcccgtgtgaga
actgtaccgagcacttgcatcacgtcgagtgatttctacctagcgaacttgaccaacctc
atccccggagccatctacacactcatcatctggcgggactcaggcgtcaggtggaacagc
attacacggacaattcctgctcctgtttcaaatgtaacattggacaataatggctccaca
aacagcctccacctgagcttccagtcggccatcggagatgtggattcatatgcagttgat
ctcgtggacggacagagtggctctgtagtccaggcggacagtctccaaaattccacaacg
gagaaaaccttcaggggcctcactgcgggcaggctgtatcgagcagaagtcacaactgtc
agtggagacctgaacagcactggtgcgggaaaagaaatgtgcacagttcctcacactgtt
gaaaatgtcactcttgaaaatgagggcaccaccaacagcctgacagtgaacttcaccagc
gccactggggatgtgactcaatacacagttgaactggtggacacaaccattggatctgtg
gtcaagtcagaaaatctatcaaacgacacaactgtgcacatctttaatggtctgatcccg
ggccagcgttaccaagtccatgtcaccacagtgagtggaaactgtaccagccctccagtg
actgatgaaatgtgcacagttcctgaaaccgttcaaagtgttactcttgaaaataacggc
accaccaacagcctgatagtgaacttcaccagcgccactggggatgtgacccaataccca
gttgaactggtggacacaaccaatggatctgtggtcaagtcaacaaatctattaaacaac
acaactgtgtacacctttaatggtctgatcccgggccggcgttacaaagtccatgtcacc
acagtaagtggagactgtaccagccttccagtgactgctgaaatgtgcacagttgctgaa
accgttcaaagtattactcttgaaaatgagggcaccaccaccagcctgacggtgaacttc
accagcgccactggggatgtgactcaatacacagttgaactggtggacacaaccaatgaa
tctgtggtcatgtcagaaaatgtatcgaacgacacaactgtgtacatctttaatggtctg
atcccgggccggcgttaccaagtccatgtcaccacagtgagtggaaactgtaccagccct
ccagtgactgatgaaatgtgcacagttcctgaaaccgttcaaagtgttactcttgaaaat
aacggcaccaccaacagccttacagtgaacttcaccagcgccactggggatgtgactcaa
tacccagttgaactggtggacacagccaatggatctgtggtcaagtcagataatctatca
aacgacacaactgtgtacatctttaatggtctgatcccgggccggcgttaccaagtccat
gtcaccacagtgagtggaaactgtaccagccctccagtgactgatgaaatgtgcacagtt
cctgaaaccgttcaaagtgtgactcttgaaaatatcggcaccaccaacagcctgacagtg
aacttcaccagcgccactggggatgtgactcaatacccagttgaactggtggacacaacc
aatagatctgtggtcaagtcaacaaatctattgaacgacacaactgtgtacatctttaat
ggtctgatcccgggccggcgttaccaagtccatgtcaccacagtgagtggaaactgtacc
agccctccagtgactgatgaaatgtgcacagttcctaaaaccgttcaaagtgtgactctt
gaaaacaacggcaccaccaacagcctgacagtgaacttcaccagcgccactggggatgtg
actcaatacaaagttgaactggtggacacaaccaatagatctgtggtcaagtcaacaaat
ctattgaacgacacaactgtgtacatctttaatggtctgatcccgggccggcgttaccaa
gtccatgtcaccacagtgagtggaaactgtaccagccctccagtgactgatgaaatgtgc
acagttcctgaaaccgttcaaagtgtgactcttgaaaatgagggcaccaccagcctgaca
gtaaacttcctcagcgccactggggatgtgactcaatacacagttgaactggtggacaca
gccaatggatttgtggataagtcagtaaatctatcaaacgacacaactgtgcacagcttt
aatgatctgatcccaggccggcgttaccaagtccatgtcaccacagtgagtggaaactgt
aacagcactgaagcggatgctgaaatgtgcacagatcctagcttggttacaaacttgaac
ctcaatacacatcacaataagaacttgtcagtgagctttgacaaggcttatggcaatgta
gataattataccgtgatactgaccaacggtaacacatctctagattcaataaaacatcta
aatcctgaccaaacggagtgctctttcgaaaatttgcagccatgcaccaaataccatgtc
tcggttaccacgtccagttcattttgtagaaatactctcgagtcaaggccacaactcaca
tatccaaaccaagtggggaaagtcacaccaaaagtaaagaattacaatcacatcgatata
cagtgggtacaacccgaaggaaatgtcgaattcttcaatgtggtcttatcaaaagattca
tcggttcattgggcaggcgtttataactcaagcgaaagttcccatgccaccggtgcattg
gcctacagcactacgtacaatgtgttagtagaggcctgctgccagaatttatgttcgcca
gatgtcaacgtttacgtgaaaacatgcccaaatgtcattctgattgcttgcctgacgact
gcaatgattgtagtgattgcttgtgctgtcagtggattcctgttttatcgacgaaggaaa
gacaaggagcccgacagagttcccacaaataaactaacttcaatgaggaaaagaaatcca
gtgccttttagcaagtttccggattattataagaagcgcgaggccgactctgggtattta
ttttccgaggaataccaggagctcagcagcgttggcaagggtcaagcgatggaagcagcg
acacttgctgaaaaccgaaccaagaaccgttacaccaacatcctcccgtttgacgtcacc
agagtgaagcttgcatctgtcgaggacatccctcactcggactacatcaacgccaactac
atcaagggccactcctcgtcacgggagtacatcgccgcgcaggggcccctggccggcacg
agggaggacttctggaggatggtgtgggagcagaaggtcaaccagatcgtgatgctcacc
aactgtgtggagcgtgggcagcccaagtgcgagtgctactggcccatggacatcacgcca
gtgcgctacggtgacatcggcctcgtaatggagtgggacaaaccgagccccgagtggacg
atccgacatttggtggtcaagaaccataagacagatgaaaagcgatcgctgtaccacttc
cacttcacggcgtggccagaccacggcgtccccgacacgacggactcactcaccaacttc
gtgcggctcttccgcacccacgtgaacacaacgaacaagggcggccccatcgttgtgcat
tgcagcgcgggcgtcgggaggaccggcaccttcatctcgctcgaccacctcctgcaggac
atcgacaagaagccggagatcgacatctacggcatcgtgcatgacatgcgcatgagtcgc
gtcttgatggtgcaaaccgagatgcagtacatattcatccacaagtgtatactcaaagtg
ctggaggaggagaagaagaaggactccgactacgaggtgatctactccaacgagggcatc
tacgagaacaacatcgtcgacaacttccacatggagaagagtaaccagaacaacaacgag
aaccacacattccttaccgacaagtga
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integrated database retrieval system
