KEGG   Petromyzon marinus (sea lamprey): 116958689
Entry
116958689         CDS       T09614                                 
Symbol
NUP43
Name
(RefSeq) nucleoporin Nup43 isoform X1
  KO
K14305  nuclear pore complex protein Nup43
Organism
pmrn  Petromyzon marinus (sea lamprey)
Pathway
pmrn03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pmrn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116958689 (NUP43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmrn03019]
    116958689 (NUP43)
   03036 Chromosome and associated proteins [BR:pmrn03036]
    116958689 (NUP43)
Messenger RNA biogenesis [BR:pmrn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     116958689 (NUP43)
Chromosome and associated proteins [BR:pmrn03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    116958689 (NUP43)
SSDB
Motif
Pfam: WD40_Prp19 WD40 Beta-prop_EIPR1 WDR55 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd
Other DBs
NCBI-GeneID: 116958689
NCBI-ProteinID: XP_032837314
UniProt: A0AAJ7UKB3
LinkDB
Position
80
AA seq 381 aa
MADVFSRAVAHKVSRARWRPATPGSLAAPAEFATGSWDAQHENKVCLWSLSEEVAGEPRA
VCEAKHSGDVMDMQFLDRQSVITASSVGSLAILTIPDDGKTLRAPRCLPVHRGVCTSVSA
RGQQAASVGEDGLLALVDVAVATVLRRYGARAVPCRGGGVDWADCTSLHAVRHATSSGVL
AVNSLGQLKHWDMRRDDLEPTAIMASPGCSLPLLCVCVHPSQPHVVAVGGEDGTLQLWDV
RQRQAPTALLQGHTAEMWEVQFHPTAPENLFTCSQDGSLWHWRVNDGFSQSVARPGAVPT
APPGPASPGSVSSAVAAQPARPGRAGGGCGWLGHPSTSGLLIDSLLPPVGAPLNGLDAAG
TRLVCGGDTEKVYVCTGIAAH
NT seq 1146 nt   +upstreamnt  +downstreamnt
atggccgacgtcttctcacgcgccgtggcccacaaagtgagccgggcgcgatggcgcccc
gcgacccccggctccctcgcggcgcccgcggaattcgccacgggcagctgggacgcgcag
cacgagaacaaggtttgcctctggtcactgtcggaggaggtggccggggagcccagagcc
gtgtgtgaggccaagcacagcggtgacgtcatggacatgcagtttttggatcggcagagc
gtgataacggcttcgtcggtgggctcgctcgcaatcctgacgataccagacgacggcaag
accctccgcgcgcctcgctgcttacccgtgcaccggggggtctgcacgtccgtgtcggcg
cggggacagcaagcggcctcggtgggcgaggacggcctcctggccctcgtggacgtcgcc
gtggcgacggtgctgcgccgctacggtgcccgtgccgtgccgtgccggggcggtggggtt
gactgggcggactgcacgtccctgcatgccgtgcggcacgccacctcatcgggcgtcctt
gccgtcaactcgctgggccagctgaagcactgggacatgcgcagagacgacctggagccc
accgccatcatggcctcgccggggtgcagcttgcccctgctgtgcgtgtgcgtgcacccc
agccagccccacgtcgtggcggtgggtggcgaagacggcactctgcagctgtgggacgtg
cgtcagcggcaagcccccaccgccctgctgcaggggcacacggccgagatgtgggaggtg
cagttccacccgacggcccccgagaacctcttcacgtgctcgcaggacggctccctgtgg
cactggagggtgaacgacggcttctcgcagtcagtcgctaggcccggtgctgtccccacg
gcccctcccgggccggcctcccccggctccgtctcgtcggccgtggcggcccagccagct
cggcccgggcgggcagggggcggctgcggctggctgggccacccgtccacgtcggggctg
ctcatcgacagcctcctgccgcccgtgggggccccgctcaacgggctggacgcggcgggg
acgcggctcgtgtgcggcggagacaccgagaaggtttacgtgtgcaccggcatcgccgct
cactga

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