Petromyzon marinus (sea lamprey): 116958689
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Entry
116958689 CDS
T09614
Symbol
NUP43
Name
(RefSeq) nucleoporin Nup43 isoform X1
KO
K14305
nuclear pore complex protein Nup43
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116958689 (NUP43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmrn03019
]
116958689 (NUP43)
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116958689 (NUP43)
Messenger RNA biogenesis [BR:
pmrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116958689 (NUP43)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116958689 (NUP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EIPR1
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
116958689
NCBI-ProteinID:
XP_032837314
UniProt:
A0AAJ7UKB3
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Position
80
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AA seq
381 aa
AA seq
DB search
MADVFSRAVAHKVSRARWRPATPGSLAAPAEFATGSWDAQHENKVCLWSLSEEVAGEPRA
VCEAKHSGDVMDMQFLDRQSVITASSVGSLAILTIPDDGKTLRAPRCLPVHRGVCTSVSA
RGQQAASVGEDGLLALVDVAVATVLRRYGARAVPCRGGGVDWADCTSLHAVRHATSSGVL
AVNSLGQLKHWDMRRDDLEPTAIMASPGCSLPLLCVCVHPSQPHVVAVGGEDGTLQLWDV
RQRQAPTALLQGHTAEMWEVQFHPTAPENLFTCSQDGSLWHWRVNDGFSQSVARPGAVPT
APPGPASPGSVSSAVAAQPARPGRAGGGCGWLGHPSTSGLLIDSLLPPVGAPLNGLDAAG
TRLVCGGDTEKVYVCTGIAAH
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtcttctcacgcgccgtggcccacaaagtgagccgggcgcgatggcgcccc
gcgacccccggctccctcgcggcgcccgcggaattcgccacgggcagctgggacgcgcag
cacgagaacaaggtttgcctctggtcactgtcggaggaggtggccggggagcccagagcc
gtgtgtgaggccaagcacagcggtgacgtcatggacatgcagtttttggatcggcagagc
gtgataacggcttcgtcggtgggctcgctcgcaatcctgacgataccagacgacggcaag
accctccgcgcgcctcgctgcttacccgtgcaccggggggtctgcacgtccgtgtcggcg
cggggacagcaagcggcctcggtgggcgaggacggcctcctggccctcgtggacgtcgcc
gtggcgacggtgctgcgccgctacggtgcccgtgccgtgccgtgccggggcggtggggtt
gactgggcggactgcacgtccctgcatgccgtgcggcacgccacctcatcgggcgtcctt
gccgtcaactcgctgggccagctgaagcactgggacatgcgcagagacgacctggagccc
accgccatcatggcctcgccggggtgcagcttgcccctgctgtgcgtgtgcgtgcacccc
agccagccccacgtcgtggcggtgggtggcgaagacggcactctgcagctgtgggacgtg
cgtcagcggcaagcccccaccgccctgctgcaggggcacacggccgagatgtgggaggtg
cagttccacccgacggcccccgagaacctcttcacgtgctcgcaggacggctccctgtgg
cactggagggtgaacgacggcttctcgcagtcagtcgctaggcccggtgctgtccccacg
gcccctcccgggccggcctcccccggctccgtctcgtcggccgtggcggcccagccagct
cggcccgggcgggcagggggcggctgcggctggctgggccacccgtccacgtcggggctg
ctcatcgacagcctcctgccgcccgtgggggccccgctcaacgggctggacgcggcgggg
acgcggctcgtgtgcggcggagacaccgagaaggtttacgtgtgcaccggcatcgccgct
cactga
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