Petromyzon marinus (sea lamprey): 116958731
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Entry
116958731 CDS
T09614
Name
(RefSeq) TPR and ankyrin repeat-containing protein 1-like
Organism
pmrn
Petromyzon marinus (sea lamprey)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_12
UvrD_C_2
UvrD-helicase
UvrD_C
TPR_1
Ank_4
TPR_10
TPR_IF140-IFT172
ABC_tran
DUF7691
Motif
Other DBs
NCBI-GeneID:
116958731
NCBI-ProteinID:
XP_032837349
UniProt:
A0AAJ7XJU5
LinkDB
All DBs
Position
81
Genome browser
AA seq
2616 aa
AA seq
DB search
MAGIGGTRQQATMSQAEFVEEVDALSIVMNRMGKDLFHMGYYLEALKIYEEALSLQLCHS
ASVGRVVSLLFCNMAMTYVKLGRFEDAVTMSCKSIDADRQWCKGYYQLGTALAGLGEAKE
AVAALQHGLAVLLVSSGHTVNLTVEFLMEMFKAMNRKTDNKSLFVGVLRMLQEEPLLHTE
KVWQQLLREMAEQGLWKARAADRESRTPLLAPGQEKWIAVLVTWLLSHGAKPASIGANPL
HAAMILILYKGIDDEEGLRVLKLLLEKAPNVNARDAGGNSLLHLVFSSPPSKRHDEILRL
LAACRVDGACRNKAGRRAFWGVGPKDPRVRTWNSLAREQKGGGGGGSGRDGGRRRRPPER
RRAAGPEALASDPVGETVEEAGEDDDGDDGDVEKVDAAKEDAVSLARDALAREIEGLIEE
YDPAETRAARSAEPASPAPTAAEPPPSVAERQAGGGGGGGPPDAPDEADGLSDGEDARDE
DGVGDGGGDDDGDDGTAGPDFESLTWEIECTRDALRTLNDKSLPRAARRNIVRVIYSLGN
GDWHLHRIKKVKGVAESSEIRLFEARVDRAARLLWELAIDFSPRCSAKPEKITGSEESAS
GGETTGEVYSEIIRIWDIVLDHKQLDHRIKRIISSCDRGTSCSLRRKLKGIERASFPSQQ
NVRRRYPLLFVKAGGSAGARPVSAEARDYFPPASTMENEYNIEKFHTFGTTVALNVLRCP
EQTIEYPFRVGELEHAVINLNPTPSEAIILVGRSGTGKTTCLMYRLWNTFDRYWQTTALR
GEPWIPKAALPPPPLPDDAGVGEDVAFDCPVKNGCVGDTGRKGTREPEREACLHASELFD
VDRGNDFLEPAAELGAARLASHQPEGGAAPICEHLHQLFVTKNHVLSREAQRNFVELSKS
TAGTRHYSPVDISGVYRLQDVKDENFPLFLNSRQLLLLLDASLANPFFARNGDGSLKEAV
RGWSMDDDILGLGDAEDAMEEDPDDEEDHRADIGKLHESKKEDPRKFVTYEVFTSDIWPA
MVKGKSPYNPATVWMEIKSFVKGSVEALQSPNGVLGLEHYEELGRKRAPNFTGDRGEVHR
LFRAYQHVKSQRCFFDEEDLVFHIYSRLCRLEVTPWSIHELYGDEIQDFTQAELALLMRC
CADPNAMFLTGDTAQSIVRGVAFRFSELRSLFHFASLPPSGGGGGAARRSRIDVRKPKRL
YELCQNYRSHSGILAFASSVVDLLQHFFPESLDWLPRDQGLFAGPLPVLLDSCSSEDLAI
LLRGHQRRAQPIEFGAHQVILVCNEKAKEQLPEELSLGLVLTVYEAKGLEFDDVLLYNFF
SDSEASFPPPHGLRLVPVARVPDIATFPSLSGDSSATKEWRVVNSYEAPARSDDAGTVPS
PRPLEETLLEEEVLLPGSRPLNFDPIAHKVLVGELKRLYTAVTRARVNLWVFDDHEEKRT
PMFRYLVGRNLVTLVRATPGEEEGLDDGVFVRSSTPEEWNAQGDFFFKHRRWKVAAKCYR
KGGVAAKEKLALAHDAALRTQSSGWSPGKAQDYLALAKTYLECGLPHMALKCLQNAKSYP
LCGRLCERLGKVREAVGWYMKSSCYDEAARLIERCEAEQSPDGGLAPVDFPWKWRELRFV
AARRHVERGDEGAMMSSLSRVAFEEQLAFLRMNDFLAQAVALLEQRGRVEEAGKMLREHG
MITDALRLARPGSQFAGECLLAKARAALRALRARASRRDEAEEEEALREIKAELQSVRET
CENNNFVSGKAEACYMLGKLESDEDLLREAITLFLEADVVVGAAEATAALLDVEGGGSPH
VVPIILEVLQPLLRLVASFLGGGARSGEAAAHREQWLAQSCEFYGLSRSEGSCRVLTQEG
SRFLDVPGGPRHGDGEPPRVPTPEADRVLARHLLGRCERLARAAESRARQTPGVCGRHPT
GGACPLRDCRGAHGGAAGGAELKKLVASKVHLVTLSGILLEAIPQLESRSPEAAKFVEAL
LPKPELADCEDLLALLFPSRFHPRGLSESPASCGDILAPIRSNPHVGSAMRELVAREVAS
RGEESRRESTDLWLEAYRAARAVNSPTEPGRLLRAEEEEEEAFRRRVERKRSGPGGATGM
LVLPNGRYASFFNLFAESAEKAFARGDVLGSIHAFCRFRKLIGTRRQRRGGGGGLAPSVA
NAAAMAELQLVLVCAVHASARPDVNTVCLPQGYLATLNLWSWMHPPNPRAKHHRDVFEAI
NEFGRGQQQPSGHDRVLRHVDHLALMVCGERNEFLLDACGDDPCVESGAAERLVVLCLVM
LVNVHILRRAKLQSRIRAAVRNAGEGLPPERRDRLPPRLLRCLEAADAAKGPGDVAAALD
ALLRQRDGDRLYDCVWSSRRRGFFLHRGSSASRFPERFERDPGEPGISASSPGRWRAARR
ALQFAVALSAGLREEATGQTVLRPARLTQGRCGVCGVSFAEERDANAAAAAAGGASGVSA
SGHYGSRGHASGTERYHAYVVEFRRLVDPATRKAAAGLRRSEGPRRQGRAGARLEMRREE
LREAMKRVELLEREQRTGVLWDVGEKLRSAVEHLDRCTTELESIVARGAADADEVHEDEG
EPEGAATFKELDPLHKTERRPGPRRRRGVPAPALGL
NT seq
7851 nt
NT seq
+upstream
nt +downstream
nt
atggctggcatcggcggaacccgtcagcaggcaacgatgagccaggctgaatttgtagaa
gaagtggatgcgctctccatcgtaatgaatcggatggggaaggatttatttcacatgggc
tactaccttgaagccctcaaaatctacgaggaggctctgtccctgcaactctgccactcc
gcctctgtcggcagagttgtttccctgctcttctgcaacatggccatgacttacgtcaag
ttggggagattcgaagatgctgtgaccatgtcgtgcaagtccatcgacgctgaccggcaa
tggtgcaagggttactatcagctgggcacggcgctcgctgggctgggcgaggcaaaggaa
gcagtcgctgcgctgcaacatggcctggctgtcctgcttgtctcctctggccacaccgtc
aacctcaccgttgaattcctcatggaaatgttcaaggccatgaaccgcaagaccgacaac
aagagcctgttcgtaggggttctccgcatgcttcaagaagaaccgctgctgcacacggag
aaagtgtggcaacagctgctgcgcgagatggcagagcagggcctctggaaggcacgtgcg
gccgaccgcgagtcgcgcacgccactgctggccccgggtcaagagaagtggatcgccgtt
ttggtcacgtggctcctcagccacggcgcgaagcccgcctccatcggcgccaaccccttg
cacgccgcgatgatcctcatcctttacaagggcattgatgacgaagaggggctgcgcgtc
ctgaagctgctcttggagaaagccccgaacgtcaacgcgagggacgcgggcggcaactcc
ctgctgcacctcgtcttctcttcgccgccctcgaagcgccacgacgagatactgcgcctg
ctcgccgcgtgccgcgtcgacggcgcgtgccgcaacaaggcggggaggcgcgcgttctgg
ggcgtcgggccgaaagacccccgcgtgcggacgtggaacagcctcgcccgcgagcagaaa
ggcggcggcggcggcgggagcggacgcgacggcgggagacgcaggcgcccgccggagcgc
aggagggcggccgggcccgaggcgctcgcctccgatcccgtgggcgaaacggtcgaggag
gcgggggaggacgacgacggcgacgacggcgacgtggaaaaagtggacgccgcgaaggag
gatgcggtcagtttggcccgagacgccttggcccgagaaatcgaagggctcatcgaggag
tacgaccccgcggagacgcgggcggcgagatccgcggagccggcgtctcccgcgccgacg
gccgccgagccgcccccgagcgtcgccgaacgccaagccggcggcggcggcggcggcggc
cctccggatgcgcccgacgaagcggacggtttgtccgacggcgaagacgcccgcgacgag
gacggtgtcggggacggcggcggcgacgacgacggtgacgatggcacggcgggccctgac
ttcgaatcgctgacctgggagatcgagtgcactcgcgacgccctcagaaccctcaacgac
aagagcctcccgcgcgccgcgaggaggaatatcgtgagggtgatttactcgctgggcaac
ggtgactggcaccttcaccgcatcaagaaagtgaaaggcgtcgccgagtccagcgagatc
aggctgtttgaggccagggtagacagggccgccaggctgctttgggaattggcgatcgac
ttttcgccacgttgcagtgccaagcccgagaaaatcaccggctccgaagagtctgcttcg
ggaggagagacgactggagaagtctacagcgagatcatccgcatttgggacattgtcctt
gatcacaagcaactcgaccacagaataaagaggatcatttcctcctgcgaccgtgggacg
tcctgctcgctccgccgcaagctgaagggcatcgagcgagcatcgttcccctcgcagcag
aacgtgcggcggaggtacccgctgctcttcgtcaaggcgggcggctccgccggtgcccgg
cccgtgtcggcggaagcccgggattactttcctccggcgagcacgatggagaacgagtac
aacatcgagaagttccacaccttcggcacgaccgtggcgctcaacgtcctgcgctgcccc
gagcagacgatcgaatacccgttccgcgtgggagagctggagcacgcggtcatcaacctg
aaccccacgccctcggaagccatcatcctcgttggccgctcgggcaccggcaagaccacg
tgcctgatgtaccggctgtggaacacgttcgacaggtattggcagacgaccgcgctccgg
ggagagccgtggatcccgaaggccgcgcttccgccgcctccgttgccggacgacgcggga
gtcggggaggacgttgcgtttgactgccccgtgaagaacggctgtgtaggtgataccggc
cgaaagggaacgcgcgagccggaacgagaagcttgcctccatgcttcagagcttttcgac
gtcgaccgaggaaatgatttcttggaacctgcggccgagctcggtgccgcacggctcgca
agtcaccagcccgagggaggcgccgctccaatttgtgaacatcttcatcagctgtttgtc
accaagaaccacgtgctgtctcgagaggcgcaaaggaactttgtggaactgtccaaatct
accgccggcacccggcactactcgcccgttgacatcagcggcgtgtacaggctccaggac
gtcaaagacgagaactttccgctcttcttgaactcgcgacaactcctcctgctgctcgac
gcgtcgctcgcgaacccgttctttgccaggaacggagacgggagcttaaaggaagccgtc
cgcgggtggtccatggacgacgacattttgggcctcggcgacgcagaagacgcgatggaa
gaggatcctgacgacgaggaagaccaccgggcggacatcggcaaacttcacgaatccaaa
aaagaggaccccaggaagttcgtgacgtacgaagtgttcacgagcgacatctggcccgcc
atggtgaaggggaagagcccgtataaccctgccacggtgtggatggagatcaagtctttc
gtaaagggctccgtggaggccctccagagccccaacggggtcctcggtttggagcactac
gaggagctgggccggaagcgggcgccaaacttcaccggggaccgtggcgaggtgcatcgg
ctgttccgcgcctaccagcacgtcaagtcccagaggtgcttctttgacgaggaggacctg
gtgttccacatctactctcgcctctgccggctcgaggtcacgccttggtcaatacatgag
ctctacggggacgagatccaggacttcacgcaggccgagctggcgttgctcatgcgctgc
tgcgccgaccccaacgccatgttcctcacgggggacacggcccagagcatcgtgcgcggc
gtggcgttccgtttcagcgagctgcgttcgctcttccacttcgccagcctcccgccaagc
ggcggcggcggcggcgcggcgcgtcgctcgcgcatcgacgtgcgcaagcccaagcgtctg
tacgagctctgccagaactaccgctcgcactcgggcatcctggcgttcgcctccagcgtc
gtggacctgctccagcacttcttccccgagtcgctggactggctgccacgggaccagggg
ctgttcgcggggccgctgcccgtcctgctcgactcgtgcagctccgaggacctggccatc
ctgctgcgaggccaccagcgccgcgcccagcccatagagttcggggcgcaccaggtgatc
ctggtttgtaatgagaaagccaaggagcagctcccagaggagctgagcctgggcctggtg
ctcaccgtctacgaggccaaggggctggagtttgacgacgttctcctctacaacttcttc
tccgactcggaggcgagcttcccccccccccacggcctccgcttggtgcccgttgcacgt
gtccccgatattgccacctttccctccttgtcaggggactcctcggcaaccaaggagtgg
cgggtggtgaactcgtacgaggcgcctgcccgcagcgacgacgccggcaccgtgccctcg
ccgcggccgctggaggagacgttgctggaggaggaggtgctgctgcccggctcccgccct
ctcaactttgaccccattgcccacaaggtgcttgtcggcgagctcaagcgcctgtacacg
gcggtgacgcgcgcccgggtcaacctgtgggtgttcgatgaccacgaggagaagcgcacg
cccatgttccgctacctcgtcgggaggaacctcgtcacgctcgtccgtgccaccccgggc
gaagaggagggcctggatgatggtgtctttgtgcgctcttccacgccggaggagtggaac
gctcagggagatttctttttcaagcatcgtcgctggaaggtggcagccaagtgctaccgc
aagggtggggttgcggcgaaggagaagctggcgctggctcacgacgcggcgctgcgcacg
cagagcagcggatggagccccggcaaggcccaggactaccttgccctggccaaaacgtac
ctcgagtgtggcctgccccacatggcgctcaagtgcctgcagaacgcaaagagctacccc
ctctgcggcaggctgtgcgagcgtctcggcaaggtgcgagaggcagtcgggtggtacatg
aagagctcgtgctacgacgaggccgcgaggctcattgaacggtgtgaggccgagcagagc
cccgacggaggcctcgcccccgtggacttcccgtggaagtggcgcgagctccgcttcgtg
gccgccaggcgtcacgtggagcggggcgacgagggcgcgatgatgagctcgctgtcccgc
gtcgccttcgaggagcagctcgccttcctcaggatgaacgactttttggcccaggccgtc
gccctcctcgagcagaggggcagggtcgaagaagccgggaagatgcttcgagaacacggg
atgattaccgacgcgttgcggctcgccaggcccgggagccaattcgctggcgagtgcctc
ctggcgaaggcccgtgccgcgttgcgggcgttgcgggcacgcgccagccgacgagacgag
gcggaggaggaggaagctttgcgcgaaataaaagcagaactccagagcgtgagggaaacg
tgcgagaataacaactttgtgagcgggaaggccgaagcctgctacatgcttgggaagttg
gaaagcgacgaagacctcctgcgtgaagcaatcacgctcttcctcgaggccgacgtggtc
gtgggcgctgccgaagcgaccgcggctttgctggacgtcgagggcggggggtcgccgcac
gtcgtccccatcatactcgaggtgctgcagcccctgctgcggctcgtggcgagcttcctc
ggcggcggcgcgagatcaggggaggccgcggctcatcgggagcagtggctggcgcagagc
tgcgagttttacggcttgagccggagcgaggggtcctgcagggtgttgacgcaggagggc
tccaggttcctcgacgtgcccggcggcccgaggcacggcgacggagagccgccgcgcgtg
cccacgcccgaggcggaccgcgtcctcgcgcggcacctgctgggtcgctgcgagcgcctc
gcccgggcggcggagtcccgcgcgcgccagacgccgggggtctgcgggcgccacccgacg
ggaggggcgtgcccgctccgagattgccgcggcgcgcacggcggcgcggccggcggggcg
gaattgaaaaagttggtggcgagcaaagttcacctggtgacgctgtccggaattctcctg
gaagcgatcccgcaactggagtcccggagccccgaagcggcaaaatttgtggaggcgctc
cttcccaagccagagctggctgactgcgaggacctcctcgccctgctgttccccagccgt
ttccacccgcgagggctgtcggagagcccggcgtcctgcggggacatcctggcgccgata
cggagcaaccctcacgtcggctccgcgatgcgcgagctcgtggcgcgggaagtcgcctcc
cgcggcgaggagagccggagggaatcgaccgacctttggctcgaggcgtaccgcgcggcg
cgcgccgtcaattctccgacggagcccggcaggctcctgcgcgccgaagaagaagaagaa
gaagcgtttcgccggcgcgtcgagcggaagaggtcggggccgggcggcgccaccggcatg
ctcgtcctgcccaatggacgctacgccagctttttcaacctcttcgcggaatcggcggag
aaggcgttcgcgcggggagacgtgctgggctcgatccacgccttctgccgcttccgcaag
ctgatcgggacgcggcggcagcgtcgcggcggcggcggcggcctcgcgcccagcgtggcc
aacgcggcggcgatggcggagctgcagttggtgctggtctgcgcggtccacgcgagcgcg
cgccccgacgtgaacacggtctgcctgccgcagggctacctcgccacgctgaacctgtgg
agctggatgcatccgcccaacccgcgggcgaaacatcaccgtgacgtcttcgaggctatt
aatgagttcggcagaggccagcagcaaccttccggccacgacagagtgctgaggcacgtc
gaccacttggccctcatggtgtgcggcgagcgcaacgagttcctgctcgacgcctgcggc
gatgacccctgcgtggagtcgggggcagcggagcgcctggtcgtgctgtgcctggtcatg
ctcgttaacgtccacatcctgaggagggcgaagctccagtcccgcatccgcgcggccgtc
aggaacgccggcgagggcctcccgcccgagaggcgggacaggctgccgccgcgtctcctg
cgctgcctggaagcggccgacgcggccaaaggacccggcgacgtggcggctgccctggac
gcgcttctgcggcagagggatggcgatcgtctctacgactgcgtgtggagctcgcggagg
cgcggcttctttctccaccgcgggtcgtcggcctcccgattccccgagcgatttgagcgc
gacccgggggagccggggatttccgcttcgagcccggggcggtggagagcggcacggcgg
gccctgcagtttgccgtggccctgagcgccgggctgagggaggaagccacgggacagacg
gtcctcagacccgcgcggctgacccaggggcgctgcggcgtgtgcggcgtgagcttcgcc
gaggagcgggacgccaacgccgccgccgccgccgccggcggcgcgtccggcgtctcggcg
agcggccactacgggtcccggggccacgcgtccgggacggagcggtatcacgcctacgtc
gtcgagttccgtcgcctggtagatccggcgacgcggaaggcggcggcggggctccggcgg
tcggaagggccgcgccgccaggggcgcgccggcgcgcggttggagatgcgtcgggaggag
ctgagggaggcgatgaagcgcgtggagctgctggagcgcgagcagcgcaccggcgtgctt
tgggatgtcggcgagaagctgcgatcggcggtggagcatttggacaggtgcaccacggag
ctggagtcgatcgtggcccgcggagcggccgacgcagacgaggtgcatgaggatgaagga
gagccagagggggcggcgaccttcaaggagctcgacccgctgcacaagacggagcgcagg
ccggggccgcggcgacgccgaggagtcccggctccggcactcgggctttga
DBGET
integrated database retrieval system
