Petromyzon marinus (sea lamprey): 116958796
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Entry
116958796 CDS
T09614
Symbol
SMYD1
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00310
Lysine degradation
pmrn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116958796 (SMYD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmrn03036
]
116958796 (SMYD1)
Enzymes [BR:
pmrn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
116958796 (SMYD1)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
116958796 (SMYD1)
Chromosome and associated proteins [BR:
pmrn03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
116958796 (SMYD1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
Motif
Other DBs
NCBI-GeneID:
116958796
NCBI-ProteinID:
XP_032837403
UniProt:
A0AAJ7UJ24
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Position
83:complement(8392..58415)
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AA seq
500 aa
AA seq
DB search
MDGLEVFQSPGKGRGLRSTRDLGTGEVVFACAPYAAVVFDSMAESVCHCCLRRGGSLHRC
VSCRFALYCDRSCQRRAWAEGHGPECRALKQSADAGGRPGENVRLAARILWRWYKEGGVR
AAQDLISIPELQDHVEALGAEERSELQSDVNALGHYWKAAAAATAGAGAGAGAGAGDGDV
QLFTHVLALIGCNCFTLSDDGGMAPVGVGLFTNLCLLNHDCWPNCTAVFNAGSHVAAMGS
TTPALRMEIRALQKVPSGCELTVGYVDFLSPSVVRRQQLQEQYHFVCTCRHCQEGLKDEL
MAGLRANGDEAPSAEEVRQVEQLTKETHDRVEELKKRNLWVDVLKLCRQCLSKQEAVFGE
CHVSLVRMVRLMADVLAYLQSFNEAATFAQRTVDAIEKIYHPNNAQLGMMVMRAGVTHWH
AGLIDKAHAHVCRALGILMVTHGPLHPITRDLEGLRVQTEMELRLFRENEFAYERLREAA
LQGSSMRLMAEPQTGDLRHK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggacggccttgaggtgtttcagagtcccggcaagggtcgagggttgagatcgacacgg
gatctcggcacgggggaagtcgtcttcgcctgtgccccctatgccgctgtcgtctttgac
tcgatggcggaaagcgtctgccactgttgcctgcggcgcggcggctcgcttcaccgctgt
gtttcttgccggttcgccctctactgcgaccgctcatgccagcgccgagcctgggcagag
ggtcacgggccggagtgccgggccctcaagcaaagcgcagacgccggtggccggcccggg
gagaacgtccgactggccgctcgaatcctgtggcgctggtacaaggaggggggtgtgagg
gccgcccaggacctcatctccatccccgagttgcaggaccacgtggaggctctgggagcg
gaggagcgatccgaactgcagagcgacgtcaacgccctgggccactactggaaggccgcc
gctgctgctactgccggtgccggtgctggtgccggtgctggtgccggcgacggcgacgtc
caactcttcacccacgtgctggcgttgatcggctgcaactgcttcacgctgagcgatgat
gggggaatggcgcccgtcggcgtgggcctcttcaccaacctctgcctcctcaaccacgac
tgctggcccaactgcacggccgtgttcaacgcgggcagccatgtggcggccatggggagc
accactccagcactgaggatggagatccgtgctctccagaaggttccgtcgggctgcgag
ctcacggtgggctacgtggacttcctgagtcccagcgtggtgcggcgccagcagctgcag
gagcagtaccacttcgtgtgcacgtgtcggcactgccaggaagggctcaaggacgagctc
atggcgggactcagggcgaacggggacgaggcgccatcggcagaggaggttcgccaggtg
gaacagctaacgaaggagactcacgatagggtggaggagctcaagaagaggaacctctgg
gtggacgtgctgaagctgtgtcggcagtgcctgtccaagcaggaggcggtgtttggtgag
tgtcacgtgagcttggtgaggatggtgaggctaatggcggacgtgctggcctacctgcag
tccttcaacgaggccgccaccttcgcacagcgcactgtcgacgcgatcgagaagatctac
caccccaacaacgcccagctggggatgatggtgatgcgtgccggggtgactcactggcac
gcaggcctcatcgacaaggcccacgcacacgtgtgtcgcgccctgggcatcctcatggtc
actcacggacccctgcaccctatcaccagagacctggagggcctgcgcgtccagaccgag
atggagctgcgtctcttccgcgagaacgagttcgcctacgagaggctccgtgaggctgcc
ctgcagggctcctccatgcgcctcatggccgagcctcaaacgggagacttacggcacaag
tga
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