Petromyzon marinus (sea lamprey): 116958801
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Entry
116958801 CDS
T09614
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116958801 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmrn03041
]
116958801 (DHX15)
03009 Ribosome biogenesis [BR:
pmrn03009
]
116958801 (DHX15)
Enzymes [BR:
pmrn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116958801 (DHX15)
Spliceosome [BR:
pmrn03041
]
Complex A
U2 snRNP components
U2 related factors
116958801 (DHX15)
Complex B
116958801 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
116958801 (DHX15)
Ribosome biogenesis [BR:
pmrn03009
]
Eukaryotic type
90S particles
Helicases
116958801 (DHX15)
BRITE hierarchy
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
ABC_tran
nSTAND3
AAA_7
AAA_29
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
116958801
NCBI-ProteinID:
XP_032837406
EnsemblRapid:
ENSPMAG00000043140
LinkDB
All DBs
Position
83
Genome browser
AA seq
818 aa
AA seq
DB search
MSKRHRVDIGDDYAANKKRHDRDRGDRGDRGDRGDRGDRGDRGDRDRGDRGDRGDRDSHH
RDRERDGGRDGGRDGGRDHRYGGGGGGNSLTPGVFPATLGLPPGLGASGFSGGLVPPLRS
PQGLTLNPFTGLPYTPRYYEILKKRVALPVWEYRERFMLTLEKHQQMVLVGETGSGKTTQ
IPQWCVDFVRAAAANAAASGPGGAGLVRRGVACTQPRRVAAMSVAQRVADEMDVALGQEV
GFSIRFEDCSSPKTVLKYMTDGMLLREAMNDPLLERYGVVMLDEAHERTLATDILMGVLK
EITKQRADLKIIIMSATLDAGKFQEYFDRCPLMSIPGRTHPVEIFYTPEPERDYLEAAIR
TVIQIHMCEEDEGDLLLFLTGQEEIEEACKRIKREIENLGPEVGDVKIIPLYSTLPPQQQ
QRIFEPAPPRKQNGAIGRKIVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLL
VTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYRNEMQDNTYPEILRSNLGTVVLQLKKL
GIDDLVHFDFMDPPAPETLMRALELLNYLGALNDDGDLTELGATMAEFPLDPQLAKMLIN
SCDCYCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHAFKQN
HDSNQWCYDNFVNYRSLMSADNVRQQLGRIMDRFALPRRSTEFTSRDYYSNIRRALVSGF
FMQVAHLERTGHYLTVKDNQVVQLHPSTCLDHKPEWVLYNEFVLTTKNYIRTVTDVKPDW
LIRIAPMYYDLSNFPQCEARRQLERIAGKLESKEYSQY
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgacaccgggttgacatcggggacgactacgccgccaacaaaaagcgtcac
gaccgggaccgcggcgaccgcggcgaccgtggcgaccgcggtgaccgtggcgaccgcggt
gaccgtggcgaccgtgaccgtggcgaccgcggtgaccgtggcgaccgggattcgcaccac
cgtgaccgggagcgcgatggcggccgggacggcggccgggacggcggccgagaccaccgc
tacggtggtgggggcggagggaactccctcactcccggggtgtttcccgccacgctgggc
ctccctcccggcctgggcgccagtggcttctctgggggtctcgtcccgcccttgcggtcc
ccccagggcctcaccctgaaccccttcaccggcctgccctacaccccccgctactacgag
atcctgaagaagcgcgtcgctctgcccgtctgggagtaccgagagcgcttcatgctcacg
ctggaaaagcaccagcagatggtgctggtgggagagactgggtcggggaagactacacag
atcccgcagtggtgcgttgactttgtccgtgcggctgctgcgaacgcagctgcgagcggg
cccggtggggccggcctggtgcgtcgtggtgtggcctgcacccagccccgccgcgtggcc
gcgatgagcgtggcccagcgcgtagcggacgagatggacgtggcgctgggccaggaggtc
gggttctcgattcgcttcgaggactgtagcagtcccaagactgtgctcaagtacatgact
gacggcatgctccttcgcgaggcgatgaacgaccccctactggagcgatacggagtggtc
atgctggacgaagctcacgagcgcacgctggccacggacatcctcatgggagtcctcaag
gagatcaccaaacagagggctgacctcaagatcatcatcatgagcgcgacgctggacgct
ggcaagttccaggaatactttgaccgctgcccgctgatgagcatccccggccgaactcat
cctgtggagatattctacacgcccgagccggagcgagactacttagaggcggcgatacgc
acggtcatccagatacacatgtgtgaggaggacgagggtgatctcttgctcttcctcacc
ggccaagaggagattgaggaggcctgcaagcgaatcaagcgtgagattgagaacctgggc
cccgaggttggcgacgtgaagatcattccgctctactccacgttgcccccacaacagcag
cagcgaatcttcgagccggcgcctccacgcaagcaaaacggagccatcgggcgcaagatt
gtggtgtcaaccaacatcgcggagacttcgctcactattgatggtgttgtctttgtgatc
gacccggggttcgccaagcagaaggtgtacaacccccgtatccgtgtcgagtccctcctg
gtaaccgccatcagcaaagcctcggcccagcagagggccgggcgggccggccggacccgg
cctgggaaatgtttccgtctctacacagagaaggcttaccgcaacgagatgcaggacaac
acctacccagagatcctccgctccaacctgggcacagtggtgttacagctgaagaagttg
gggatcgatgatctggtccacttcgacttcatggatccgccagcccccgagacgctgatg
cgagcccttgagctgctgaactacctgggggccctcaatgacgatggggacctcacggag
cttggtgccaccatggcagagttcccgctcgatcctcagctcgccaagatgctcattaac
tcgtgtgattgctactgctccaacgagatcctctccatcaccgccatgctgtcagtcccg
cagtgctttgtgagaccgacggaagccaagaaggccgccgatgaatccaagatgcgtttt
gctcacattgatggtgaccacctcaccctgctgaacgtctaccacgccttcaagcagaac
cacgactctaaccagtggtgttatgacaatttcgtcaactaccgctcgctcatgtcagct
gacaacgtccgtcagcagctgggccgcatcatggatcgctttgccctcccgcggagatcc
acggagttcaccagccgagactactacagcaacattcggcgggcactggtgtcgggattc
ttcatgcaggtagctcacctggagcgaacgggacactacctgacagtgaaggataaccag
gtggtccagctccacccgtccacgtgcctggaccacaagcccgagtgggtcctctataac
gagttcgtgctcaccaccaagaactacatccgtacagtcacagacgtcaagccagactgg
ttgatccgcatagcccccatgtactacgacctgagcaacttcccccagtgtgaagctcgc
cgccaacttgagaggatcgccggcaagctggagagcaaagagtacagccagtactga
DBGET
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