Paenibacillus mucilaginosus KNP414: KNP414_00174
Help
Entry
KNP414_00174 CDS
T01550
Symbol
pcrA
Name
(GenBank) PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pms
Paenibacillus mucilaginosus KNP414
Pathway
pms03420
Nucleotide excision repair
pms03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KNP414_00174 (pcrA)
03430 Mismatch repair
KNP414_00174 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pms03400
]
KNP414_00174 (pcrA)
Enzymes [BR:
pms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KNP414_00174 (pcrA)
DNA repair and recombination proteins [BR:
pms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KNP414_00174 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
KNP414_00174 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
DUF2067
ResIII
Terminase_6N
DEAD
Motif
Other DBs
NCBI-ProteinID:
AEI38825
UniProt:
F8FKW5
LinkDB
All DBs
Position
176022..178223
Genome browser
AA seq
733 aa
AA seq
DB search
MINQPIDIFQAVNKLNPQQKQAVETVEGPLLIMAGAGSGKTRVLTHRIAYLIATRKAAPW
SILAITFTNKAAREMQERVSSLVGPQGGDIWVSTFHSMCVRILRRDISRIGFTSNFSILD
SGDQLSVIRNIMKEQNIDSKKFEPKAVQAAISNAKNELQTPEMFERKIGDYFDGIVAKVY
SSYQRKLRANNSLDFDDLIMTTIELFKQVPEVLDFYQNKFQYIHVDEYQDTNRAQYMLCR
MLADKHKRICVVGDSDQSIYKWRGADISNILDFEKDYPNATTILLEQNYRSTSNILNAAN
KVIANNTGRKVKNLWTDKAEGDKIKVYQADSEHEEGYFITGEIRRNLDNGRRYKDHAILY
RTNAQSRVIEEILIKSDIPYQIVGGVKFYDRKEIKDILAYLRLISNPDDDISFARVVNVP
KRGIGDTSLDRLAGAAAQFGVSLFAMLENVDSIEMAAKAKNALADFRDMIENLHRMVEYL
SVTELTEKMLELSGYRDELRRENTIESQARLENIDEFLSVTMDFEKRNEDKSLVSFLTDL
ALIADIDSMNADPEEGKQGVVLMTMHSAKGLEFPVVFIMGLEEGVFPHSRAVADNEELEE
ERRLAYVGITRAEEQLFLTCARMRTLFGRTAQNAPSRFLRELPPELLEPARPGGFRGGGA
APAASATTGGASAASAPKSLDFAMGDKVSHGKWGTGTVVALKGSGDDTELQIAFPAPVGV
KRLLAKFAPITKV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgattaaccaacctatcgatatatttcaggcggtcaataagctcaatccccagcagaag
caggcggtggagacggtcgaaggacctctgctgatcatggccggcgcagggagcggcaag
acgcgcgtgctgacgcaccgcatcgcttatctgattgctacgcgcaaggccgcgccttgg
agcatcctcgccatcacctttacaaacaaggcggcaagggagatgcaggagcgtgtgagc
tccctggtcggcccgcagggcggcgacatctgggtatccaccttccactccatgtgcgtc
cggattctgcgacgcgatatttcgcgcatcgggttcacctcgaatttctcgatcctggat
tccggcgaccagctctccgtgatccgcaacatcatgaaggaacagaacatcgactcgaag
aaattcgagccgaaggcggtgcaggccgcgatctccaacgcgaagaacgagctgcagacc
ccggagatgttcgagcggaagatcggggattattttgacggcatcgtggccaaggtctac
tcttcctaccagcgcaagctccgggcgaacaactcgctggacttcgacgatctcattatg
acgacgatcgagctgttcaagcaggtcccggaagtattggacttctaccagaacaaattc
caatacatccacgtggacgagtaccaggatacgaaccgggcgcagtacatgctctgccgg
atgctggccgacaagcacaagcggatctgtgtcgtgggcgacagcgatcagtcgatctac
aagtggcgcggcgcggatatttccaatattctcgacttcgagaaggactatccgaatgcg
acgacgatcctgctcgagcagaactaccgttcgacctcgaacatcctgaacgcggcgaac
aaggtcattgccaacaatacggggcgcaaggtcaagaatctgtggaccgacaaggcggaa
ggggacaaaatcaaggtctaccaggccgattccgagcatgaggaaggctacttcatcacg
ggcgaaatccgccgcaacctggataacggccgccgctacaaggatcatgcgatcctgtac
cgtacgaacgcccagtcccgtgtcatagaggaaattctcatcaagtcggatatcccttac
cagatcgtcggcggcgtgaagttctacgaccgcaaagagatcaaggacattctcgcttac
ctgaggctgatttcgaatccggacgacgatatttcctttgcccgtgtcgtcaatgtgccg
aagcggggcatcggcgatacgtcgctggaccgcctggcgggcgccgcggcgcagttcggc
gtctcgcttttcgctatgctggagaacgtggattccatcgagatggcggctaaggcgaag
aatgcgcttgcggatttccgcgatatgatcgagaatctgcaccggatggtggaatacctg
tcggtcaccgaactcacggagaaaatgctggagctctccggctaccgcgacgagctgcgg
cgcgagaacacgatcgagtcccaggcccgcctcgagaacattgacgagttcctgtccgta
acgatggacttcgagaagcgcaatgaagacaaatcgctggtatccttcctgacggacctg
gcgctgattgcggatatcgactcgatgaacgccgatccggaagaaggcaagcagggcgtc
gtgctcatgacgatgcacagcgccaagggcctcgagttccccgttgtctttattatgggc
cttgaggaaggcgtatttccgcattcccgtgcggtcgccgacaacgaggagctcgaagag
gaacgccgcctcgcgtacgtgggcatcacccgtgccgaagagcagctcttcctcacgtgc
gcgcggatgcgcacgctgttcggccggacggcgcagaacgcgccgtcgcggttcctgcgc
gagcttccgccggagctgcttgagcccgcccgtccgggcggcttccgaggcggcggggcg
gccccggccgccagcgcaaccacaggcggcgcgtccgcggcctccgcgccgaagagcctc
gactttgccatgggtgacaaagtctcgcacggcaaatggggcacggggaccgttgtcgca
ctaaagggctcgggggatgacaccgagctgcagatcgctttccccgccccggtgggcgtg
aagcggctgctcgcgaagttcgcaccgattaccaaggtgtaa
DBGET
integrated database retrieval system
