Paenibacillus mucilaginosus KNP414: KNP414_00866
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Entry
KNP414_00866 CDS
T01550
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pms
Paenibacillus mucilaginosus KNP414
Pathway
pms00040
Pentose and glucuronate interconversions
pms01100
Metabolic pathways
pms02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
KNP414_00866
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KNP414_00866
Enzymes [BR:
pms01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
KNP414_00866
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AEI39456
UniProt:
F8F4R4
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Position
894510..895916
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AA seq
468 aa
AA seq
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MFIMFKEWKVLLSCMLIGSLLSGGAAVAGSASSSIEVGAYPKISSPFVQTLPDGVTWAAY
DTGGLGVTGGNTAAQENVYVVHNRSELVQALGGDNAANGANGVPKLIFVQGTIDMNVDAD
NRPLGLEAYAQLAYEEALLAEAAAPTGRTIVKYDEAAYVAAYDPAVYGRKAPAGPLEEAR
AAAQKKQSANIKINVGSNTTIIGLGKDAKILGGNLVIKSDNVIVRNIEFQDAYDFFPQWD
PTDGSSGNWNSQYDSISIIGGTHVWIDHNTFNDGDRPDHTFPLYYGRKFQHHDGAVDITT
DSKVKKSSNYITISYNHFAEHDKTSLIGSSDSTTYDANNLRVTMHHNHFEGTGQRVPRVR
FGQVHVYNNYYSESTLYAIGVGVSAQVVSEANVFESVSSPVAYYDKAALPGSVSDAGSLY
LNSGTPVLKGVPNWVLRETYAYKLDPAQAVKAKVLAQAGAGRMAPAGH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
gtgttcattatgttcaaagaatggaaagtgctgctcagctgcatgctcatcggatcgctt
ctgtccggcggggccgccgtggcgggatccgcatcttcttctattgaggtcggggcttac
cccaaaatttcatccccatttgtgcaaacgcttccggatggggtaacctgggctgcctat
gataccggcggtctgggcgtaacgggcggcaatacggctgcgcaggagaacgtctatgtc
gtccataaccgcagtgagctggtgcaggcgctcggcggagataatgcggcgaacggtgcc
aacggggtgccgaagctgattttcgtgcaggggactatcgatatgaacgtcgatgcggat
aaccggcctctgggcctcgaagcgtatgctcagctggcctacgaagaagcgcttctggcg
gaggctgcagccccaacgggcaggacgatcgtaaagtatgatgaagccgcttacgtggct
gcctacgatcctgcggtctacggcaggaaggcgccggccggtccgctggaagaagcaagg
gcggccgcgcagaagaagcagtccgccaatatcaagatcaatgtcggctccaacactacg
atcatcggcctcggcaaggatgcaaagattctcggaggcaacctggtgatcaagagcgac
aatgtcatcgtccgcaatatcgaattccaggatgcgtatgactttttcccgcagtgggac
cctacggacggcagcagcggcaactggaattcccaatacgactcgatctccatcattggc
ggcacgcatgtgtggatcgaccataacacgttcaacgacggggaccgtccggatcatacc
ttcccgctgtactacgggcggaagttccagcaccatgacggggcggtggacatcacgacc
gactccaaagtgaagaaatcgtcgaactacattaccatctcctacaaccacttcgcggag
catgacaaaacgtccctgatcggttccagcgactcgacgacctatgatgcgaacaacctg
cgggtgacgatgcatcacaaccacttcgaaggcacgggccagcgggttcctcgcgtgagg
ttcggccaggtgcatgtctacaataattattacagcgagtccacgctgtatgccatcggg
gttggcgtatcggcgcaggtcgtctccgaagccaacgtcttcgagtcggtaagctcgccg
gtcgcttattacgacaaggcggcgctgccgggcagtgtgagcgatgccggcagcctgtac
ctgaacagcgggacgccggtgctgaagggtgtgccgaactgggtgctgcgggagacctac
gcgtataagcttgatccggcgcaggccgtgaaggcgaaggtgctcgcgcaggcgggagca
ggccggatggcaccggccgggcactga
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