Paenibacillus mucilaginosus KNP414: KNP414_01272
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Entry
KNP414_01272 CDS
T01550
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pms
Paenibacillus mucilaginosus KNP414
Pathway
pms03030
DNA replication
pms03430
Mismatch repair
pms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KNP414_01272
03430 Mismatch repair
KNP414_01272
03440 Homologous recombination
KNP414_01272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pms03032
]
KNP414_01272
03400 DNA repair and recombination proteins [BR:
pms03400
]
KNP414_01272
Enzymes [BR:
pms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KNP414_01272
DNA replication proteins [BR:
pms03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KNP414_01272
DNA repair and recombination proteins [BR:
pms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KNP414_01272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AEI39837
UniProt:
F8FHD5
LinkDB
All DBs
Position
1273845..1277615
Genome browser
AA seq
1256 aa
AA seq
DB search
MGDFVHLHVHSEYSLLDGAARIETLVSRAADLGMTSLALTDHGVMYGAIPFYKACRERGI
KPIIGCEVYYTSGSLKQKGTRQDQPIYHLILLAKNLQGYQNLMKLVSVAHLEGYHYKPRI
DPEHLRKYSEGLICTSACLGSEVSQHLLHGRYDDAKAAAERYRDIFGEDFFLEVQDHGLA
EQKKVNQDLIRLGHETGIPLVATNDVHYVYEPDHAMQDILICIGTGKTVEDEDRLRIHSS
QLFLKSAEEMGRLFPHIPEAIENTRVIADRCGLELEFGRSILPQFDPIPEGLTAGDYLTQ
LCRTGLQERYAPLSEWGDEAWRRNVEARLDYELGVIERMGYSDYFLIVWDFIRFAHEEGI
VTGPGRGSSAGSLVAYVLKITDVDPIRYNLLFERFLNPERVSMPDIDIDFSDLRRDEVID
YVVRKYGRDRVAQIITFGTMAAKAAVRDVGRALNLPYNDVDKAAKLIPGQLGMTLEAALR
SSPELKALADRQPKTAELLEMAMKVEGMPRHASTHAAGVIISREPLTQYVPLQEGTEQTA
LTQYPMEHLESIGLLKMDFLGLRTLSIIERSLEWIRERTGRTIDWKGVSMEDPLTYEMLG
RGDTTGVFQLESPGMRRVLRELRPSGFEDIISVLALYRPGPMEFIPQYIRCKHGQQEVEY
PHPVLEGILKDTYGIIVYQEQIMQIASLMAGFSLGEADLLRRAVSKKKREVLDEERAHFV
EGSRGQGYTEAEANRVYDMIVRFADYGFPRAHATAYGVLAFQTAYLKAHYPVDFMASMLA
AVTGSHHKVAEYSDDCRKMGIAVLGPDVNESGVLFTPVGAHRTADGAASGKMGAPADQEG
VRQESASGHGAIRFGLAAIKNVGTNAIESIIKERRSGPYQSLIDFCRRIDLRVCNKRVLE
SLIQAGALDSLPGHRSQLLAMLEDAVDAAVKWRKDRDDLQLVLDGFVEEVSWEVEYPAVA
PYSMTQKLELERELLGLYISGSPLDDYEDVLRRMEPDSLAQLPQYPDGSEVKVAGLVMSS
KTIVTKKGQPMAFMELEDRVGKSEVVLFPEVWKRAAPVVQKGRPVLVLAKLQLGDEDFKL
LADQVVALDDPQLEQKAAKPAGGGYARGGAGRSTPAAGPGPRPGRPGRQRPGSAHSGGAA
RVHAHLAEARGAGGARRAEAADHGARRASAGGALLRELPKDARAQRPVSGEAFTGAVPPH
RRAARQRQRESEVAKSCRSPRRAAFTQILYIGCLPGCTASLILCKPEINPAFPAYI
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattttgtccatttgcatgtgcacagcgaatacagcctgctggacggcgccgca
aggattgagaccttggtgtcccgtgcggcggaccttggcatgacttctttggcgctgacg
gaccatggggtcatgtacggggcgattcctttctacaaagcgtgcagggagcgggggatc
aagccgatcatcggctgcgaggtctattacacctccggctccctgaagcagaagggcacg
cggcaggaccagccgatctatcacctgatcctgctggcgaagaacctgcagggctatcag
aatctaatgaagctggtgtcggtggcgcaccttgaaggctatcattacaagccgcgcatc
gacccggagcacttgcgcaagtacagcgagggcctgatctgcacgagcgcctgtctcggc
agcgaggtgtcgcagcatctgctgcacggcaggtatgacgacgccaaggcggcggcggag
cggtaccgggacatcttcggggaggacttcttcctggaagtacaggaccacggcctcgcc
gagcaaaagaaagtcaaccaggacctgatccgcctcggccacgagaccggcatcccgctc
gtggctacgaacgatgtgcattacgtctacgagcccgatcatgcgatgcaggatatcctg
atctgcatcggaacgggcaagacggtcgaggacgaggaccgtctgcgcattcactcctcc
cagctgttcctgaagagtgcggaggagatggggaggctgttcccgcatatccccgaggcg
atcgagaacacgcgggtcattgccgaccgctgcgggctcgagctcgaattcggccgctcg
atactgccgcagttcgatccgattccggaagggctgacggcgggcgattaccttacgcag
ctctgccgtacgggcctgcaggagcggtatgccccgctttccgagtggggggatgaggct
tggcgccgcaatgtggaggcccggctggactacgagctcggtgtcatcgagcggatgggg
tactcggattattttctgatcgtatgggactttatccgcttcgcccatgaggaaggcatc
gttacgggcccgggacggggatcgtctgcgggcagccttgtggcctacgttctcaagatt
accgacgtcgacccgatccgctacaacctgctcttcgagcggttcctgaatccggagcgg
gtgtccatgcccgatatcgacatcgacttcagcgacctgcgccgcgacgaggtcatcgac
tatgtcgtgcgcaagtacgggcgggaccgcgtcgcccagatcatcacgttcggtacgatg
gcggcgaaggcggccgtacgggacgtgggccgggcgctgaacctgccgtacaacgacgtg
gacaaggcggcgaagctgattcccggccagctcggcatgacgctcgaggcggcgctgcgc
tcctcgccggagctcaaggcgctggccgaccgccagccgaagacggcggagctgctggag
atggcgatgaaggtggagggcatgccgcgtcacgcctcgacgcacgccgcaggcgtcatc
atctcgcgggagccgttgacgcagtatgtgccgctgcaggaaggcaccgagcagaccgcg
ctgacccagtatccgatggagcatctggagtcgatcgggctgctcaagatggattttctc
gggctgcgcaccctgtccatcatcgagcgctcgttggagtggatccgcgagcggacgggc
cggaccatcgactggaagggcgtatcgatggaagacccgctgacctacgagatgctcggc
cggggagacacgaccggcgtcttccagctcgagtcgccggggatgcgccgggtgctcagg
gagctccggcccagcgggtttgaagacattatctcggttcttgcgctgtaccgtccgggt
ccgatggaattcattccgcagtatatccgctgcaagcacggccagcaggaggtggagtac
cctcatcctgtgctggaagggattctgaaggatacgtacggcatcatcgtctaccaggag
cagatcatgcagatcgcttccctgatggcgggcttctcgcttggcgaagcggacctgctg
cgcagggccgtatcgaaaaagaagcgggaggtgctcgacgaggagcgcgcccacttcgtg
gaaggcagccggggccagggttacaccgaggcggaagcgaaccgggtgtacgatatgatc
gtacgcttcgcggactacggcttcccgcgggcgcatgcaacggcttacggggtgctcgcc
ttccagacggcgtacctcaaggcgcattacccggtggactttatggcttccatgctggcg
gccgtgacgggcagccaccacaaggtcgccgaatactcggacgactgccgcaagatgggc
atcgccgtgctcggcccggacgtcaacgagagcggcgtgctgttcacgccggtgggggcg
caccgtacggcggacggcgctgcttccgggaagatgggagcacccgccgatcaggaaggc
gtccgtcaggaatccgcatccggtcatggggcgatccgcttcggactggccgccatcaag
aatgtgggcacgaacgcgatcgaatcgatcatcaaggagcggcggtcgggcccgtaccag
agcctgatcgacttctgccggcggatcgacctgcgcgtgtgcaacaagcgcgtgctggaa
tcgctgattcaggcgggggcactcgattcgctgcccggtcaccgctcccagctgctggcg
atgctcgaagacgccgtcgatgcggccgtcaagtggcgcaaggaccgcgatgatctgcag
cttgtcctcgacggtttcgtggaagaggtgtcctgggaggtggaatatcccgccgtggcg
ccttattccatgacccagaagctcgagctggagcgggagctgctcggtctgtacatctcc
ggcagcccgctggatgactatgaggacgtgctccgcaggatggagcccgattcgctggcc
cagcttccgcagtacccggacggaagcgaggtcaaggtggctgggcttgtcatgagcagc
aagacgatcgtgacgaaaaagggccagccgatggccttcatggagctggaggaccgggtc
ggcaagtccgaggtcgtcctcttccccgaggtgtggaagcgggcggccccggtggtgcag
aagggccgtcccgtgctcgtgctggcgaagctgcagctcggcgacgaggacttcaagctg
ctcgccgaccaggtggtggcgctggacgacccgcagctcgagcagaaggccgcgaagccg
gcgggcggcggctatgcccgcggcggcgccggccggagcacgcctgcggccgggcccggc
ccgcggccaggccggcccgggcggcagcgccccggctccgcgcacagcggcggtgcagcg
cgtgtacatgcgcatctcgccgaagcacgaggagccggcggtgctcgccgagctgaagcg
gctgatcacggagcacggcgggcctctgccggtggtgctctattacgagagctcccaaaa
gacgctcgggctcagcgaccagtatcaggtgaagccttcaccggagctgttccaccgcat
cgaagagctgctcggcaaagacagcgtgagagtgaagtagcgaaaagctgccgttcaccg
cggcgagcggcgtttacacaaattttatatatcggatgtcttcccggctgcacggcaagt
ttgattttgtgtaaacctgaaataaaccctgccttcccggcatacatttag
DBGET
integrated database retrieval system
