Paenibacillus mucilaginosus KNP414: KNP414_01300
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Entry
KNP414_01300 CDS
T01550
Symbol
polA
Name
(GenBank) PolA
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pms
Paenibacillus mucilaginosus KNP414
Pathway
pms03030
DNA replication
pms03410
Base excision repair
pms03420
Nucleotide excision repair
pms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KNP414_01300 (polA)
03410 Base excision repair
KNP414_01300 (polA)
03420 Nucleotide excision repair
KNP414_01300 (polA)
03440 Homologous recombination
KNP414_01300 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pms03032
]
KNP414_01300 (polA)
03400 DNA repair and recombination proteins [BR:
pms03400
]
KNP414_01300 (polA)
Enzymes [BR:
pms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KNP414_01300 (polA)
DNA replication proteins [BR:
pms03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KNP414_01300 (polA)
DNA repair and recombination proteins [BR:
pms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KNP414_01300 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KNP414_01300 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AEI39865
UniProt:
F8FJA2
LinkDB
All DBs
Position
1309928..1312642
Genome browser
AA seq
904 aa
AA seq
DB search
MNGVLLLSKLVLIDGNNIAYRAFFALPLLSNSKGLHTNAILGFTQMLLRLIQEEKPTHFL
VAFDAGKATFRHSNYADYKGGREKTPGELSEQFPVLKELLESFGIKQFQLEGYEADDIIG
TLTRIADEKNDMDVLVVTGDKDMLQLASDRVSIALSRKGISEVELHDPAYIGEKYGLKPL
QIIDLKGLMGDASDNIPGIPGVGEKTALKLLHEYGSLENVLENASSIKGKLGEKVAAHVE
DAKMSKDLATIYREVPLEMTWDELAYSGYDDDALAEKLRKLEFKQILERLGLSGAGLAAE
GEGAQAAVAVESVLVGPDQVNALVQALPRVKALHVEVIGENPHVGEVLGAAFLAEGEPVD
GEEEAAPTAYYVPFSLLKDEAAAEVRAWLESEDKSVSIYDVHKASVALSWQGVELRGVSF
DVLLAGYLLDPTDTTLTLSGLTSRYGMPALKSDEDVFGKGAKFKLPSDGAVSDFLCDKAA
AVYRLTAKLQEELEKSEMQKLFHELELPLATVLANMERKGIKVDVEELKAYGAELSGRLE
SIMAAIYDSAGMEFNINSPKQLGEVLFEKLQLPVVKKTKTGYSTDAEVLEKLEPFHPVVG
HILNYRTLSKLQSTYVEGLLKEVRQDTGKVHTYYRQTIAATGRLSSQYPNLQNIPIRLEE
GRKIRKVFVPSQPGWRILTADYSQIELRVLAHISQDERLMEAFREDMDVHTKTAMDVFGV
SEDAVDANMRRQAKAVNFGIVYGISDYGLSQNLNITRKDAARFIEQYFAVFGGVRKYMDD
IVKKARDDGYVTTLLQRRRYLPEIKASNFNLRSFAERTAMNTPIQGTAADIIKLAMVQLE
ERMDREGVKSRLLLQVHDELVLEVPEEELETMKAMVADVMENALKLDVPLKVDVDSGENW
YEAK
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggtgcttcttttgtccaaattggtgctgatcgacggcaacaacatagcgtac
cgcgcgttttttgcgctgccgctgcttagcaattcgaagggactgcataccaatgcgatc
cttggttttacacagatgctgctgaggctcatccaagaagagaaaccgacgcattttctc
gtggcgttcgacgcagggaaggcgacgttccgacatagcaattatgccgattacaagggc
ggccgggagaagacgccgggggagctctccgagcagttccctgtattgaaagaactgctg
gagagcttcgggatcaagcagttccagctcgagggctatgaagcggacgatattatcggg
acgctgacccgtattgccgatgagaagaacgatatggacgttctcgtcgtgaccggggac
aaggatatgctgcagcttgcctccgaccgcgtctcgatcgcgctctcccgcaagggcatc
tccgaagtggagctgcatgatccggcttatatcggggagaagtacggcctgaagccgctt
cagatcatcgatctcaaagggctcatgggcgacgcctccgacaacattccggggattccg
ggggtaggggagaagacggcgctgaagctccttcatgaatacggctcgctcgagaatgtg
ctcgagaacgcttcttccattaaaggaaagcttggcgagaaggtggccgcgcatgtggag
gatgcgaagatgagcaaggatctcgcgacgatctaccgcgaagtgccgctggagatgacg
tgggacgagcttgcttacagcggctatgacgatgatgcgctggcagagaagctgcggaag
ctggagttcaagcaaatcctggagcggcttggtctgtccggtgccggactggcggccgaa
ggtgaaggcgcacaggcggccgtggcggtggaatcggttctcgtgggaccggatcaggtg
aacgcgctggttcaggcgctgccccgcgtgaaggcgctgcatgtcgaggtcatcggagag
aatccccacgtcggcgaagtgctgggagcggccttcctggcggagggcgagccggtggac
ggggaagaggaagcggccccgacggcatactatgtgccgttctctctcctgaaggacgag
gccgccgccgaagtaagagcctggctggagtcggaggacaagtccgtctcgatctacgat
gtccacaaggcgtccgtcgccttgtcctggcagggcgtagagctgagaggcgtgagcttc
gacgtgctgcttgccgggtacctgctcgacccgacagatacgactctgaccctgagcggc
ttgacgtcccgttacggcatgcccgcgctgaagagcgacgaggacgtcttcggcaagggc
gcgaagttcaagctgccgagcgacggagccgtcagcgacttcctgtgcgacaaggccgct
gcggtataccgcttgacagcgaagctgcaggaggagctggagaagagcgagatgcagaag
cttttccacgagttggagctgcctctggccaccgtgctggcgaacatggagcgcaagggc
atcaaggtcgatgtcgaagagctcaaggcctacggtgccgagctctccggccggctggag
agcatcatggcggcgatctacgactcggccggcatggagttcaacatcaattcgccgaag
cagctcggtgaggtgctcttcgagaagctgcagctgccggtagtcaagaagacgaagacc
ggatattcgaccgatgccgaggtgctcgagaagctggagccgttccacccggtggtcggc
catatcctgaactaccgcacgctgtccaagctccagtcgacctacgtcgaagggctgctt
aaggaggtgcggcaggacacgggcaaggtgcacacctactaccggcagacgatcgcggct
acgggacgcctcagctcccagtacccgaacctgcagaatatcccgatccggctggaggaa
ggccgcaagatccgtaaggtcttcgtgccttcccagccgggctggcgcatcctgacggcg
gactactcccagatcgagctgcgcgtgcttgcccacatctcgcaggatgaacggctgatg
gaagccttccgcgaggatatggacgtgcacacgaagacggcgatggacgtgttcggcgtg
tccgaggacgcggtggatgccaacatgcgccgccaggccaaggcggtcaactttgggatc
gtctacggcatcagcgactatggcttgtcccagaacctgaatatcacccggaaggatgcg
gcgaggttcatcgagcagtattttgccgtgttcggcggggttcgcaaatatatggatgat
atcgtgaaaaaggcgcgcgacgacggctacgtgacgacgctgctccagcggcgcaggtat
ctgccggagatcaaggcgtcgaacttcaatctccgctccttcgcggagcgtacggccatg
aatacgccgatccagggaacggccgcggatatcatcaagctggcgatggtccagctggaa
gaacgcatggatcgcgaaggcgtcaagagccggctgctgctccaggtgcatgacgaactt
gtactcgaggtgccggaggaagagctcgagaccatgaaggccatggtcgccgatgtgatg
gagaatgccctgaagctcgatgtgccgctgaaggtcgacgtggactccggggagaactgg
tacgaggcgaaataa
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