Paenibacillus mucilaginosus KNP414: KNP414_02941
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Entry
KNP414_02941 CDS
T01550
Name
(GenBank) putative endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pms
Paenibacillus mucilaginosus KNP414
Pathway
pms03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KNP414_02941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pms03400
]
KNP414_02941
Enzymes [BR:
pms01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
KNP414_02941
DNA repair and recombination proteins [BR:
pms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KNP414_02941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
Motif
Other DBs
NCBI-ProteinID:
AEI41499
UniProt:
F8F5T5
LinkDB
All DBs
Position
3074793..3075641
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AA seq
282 aa
AA seq
DB search
MRLGCHISIRGGYTEAARTALKLGAESFQYFPKNPRSLAVKSFNRQDAESCARLCREHGL
SAIAHTSYPVNMAVDDPGLREATVASLRNDLEIADTCGSVGIIVHFGKYKGPDPLQGYKN
IIQCVNEVLHGYKGEALFLIENQAGEGSRMGTTFEELVQIRSLCAYPDKVGFCLDTCHAF
ASGLWPSGEKGWSRLEAHALQTGYLPHLHAVHLNDSVYPWGAGKDRHAMIGRGEMGEVRF
RELLASPALRSRKTLPLVLETPVPRGLTHAPEIRYLEELRDS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
ttgagactcggatgtcacatcagtatccgcggcgggtataccgaagcggcacggaccgcg
ctgaagctgggggcggagtcgtttcagtattttccgaagaatccccggagccttgccgtc
aaaagcttcaaccggcaggacgccgagagctgcgcccggctgtgccgcgagcacggcttg
tccgccattgcccatacctcgtatccggtcaatatggccgtagacgatccggggctgcgt
gaagcgacggtggcttcgctgcgcaacgacctggagatcgcggacacgtgcgggtccgtc
ggcatcatcgtgcattttgggaaatataagggaccggacccgttacaaggctacaaaaat
attatacaatgtgtgaatgaagtgcttcacggctacaagggagaggctttgttcctgatt
gagaatcaggcgggcgaaggctcgcgcatgggcacgaccttcgaggagctcgtgcagatc
cgctcgctgtgcgcctatccggacaaggtcggcttttgtcttgatacctgccatgcgttc
gcctcgggcctgtggccatcgggggagaaaggctggtcccgccttgaggcgcatgcactg
cagacgggctacctgccccatctgcatgccgtccatctcaacgactccgtctacccgtgg
ggggccggcaaagaccggcatgccatgatcggcaggggcgagatgggcgaggtgcggttc
cgcgagctgctggcttcgcctgccctccgcagccggaagacgcttcctctggtgcttgaa
accccggtgccacgtggactcacccatgcgcccgaaatccgctatctggaggagctgaga
gattcttga
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