Paenibacillus mucilaginosus KNP414: KNP414_05856
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Entry
KNP414_05856 CDS
T01550
Symbol
rnc
Name
(GenBank) Rnc
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pms
Paenibacillus mucilaginosus KNP414
Brite
KEGG Orthology (KO) [BR:
pms00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KNP414_05856 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pms03019
]
KNP414_05856 (rnc)
03009 Ribosome biogenesis [BR:
pms03009
]
KNP414_05856 (rnc)
03036 Chromosome and associated proteins [BR:
pms03036
]
KNP414_05856 (rnc)
Enzymes [BR:
pms01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
KNP414_05856 (rnc)
Messenger RNA biogenesis [BR:
pms03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KNP414_05856 (rnc)
Ribosome biogenesis [BR:
pms03009
]
Eukaryotic type
90S particles
RNase
KNP414_05856 (rnc)
Prokaryotic type
rRNA processing factors
KNP414_05856 (rnc)
Chromosome and associated proteins [BR:
pms03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
KNP414_05856 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
NTP_transf_4
DSRM_MRPL44
DND1_DSRM
Chitin_synth_1N
Motif
Other DBs
NCBI-ProteinID:
AEI44380
UniProt:
F8F9Q1
LinkDB
All DBs
Position
complement(6458511..6459215)
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AA seq
234 aa
AA seq
DB search
MHRNLKLLQSELNITFSNPDLLRQAFTHSSYVNEHRIGQYKDNERLEFLGDAVLELTVSE
YLFDKYPDRSEGELTKLRASIVCEPSLVGFAEQLEFGSYVLLGKGEELTGGRTRPALLAD
VFESFIGALYLDQGLERVRTFLQQYMFPHLPQQGRLLTADYKTHLQEHTQQHSMGQLEYK
IVDERGPAHEREFVARVFLGEQLLGEGTGRSKKEAEQHAAAEALAKLKVKVEHK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgcaacctaaagctgcttcagtctgagctcaacatcacattcagcaaccctgat
ttgctccggcaggcgttcacccattcgtcctatgtgaacgagcaccggatcggccagtac
aaagacaatgaacgcctggaattcctcggtgacgcggtattggagctgaccgtctcggaa
tatttgttcgacaaatatcccgaccgttcggagggggagctcacgaagctccgcgcttcc
atcgtctgcgaaccgtcgcttgtcggcttcgccgagcagctcgagttcggatcctatgtg
ctgctcggcaaaggtgaggagcttaccggcggccggacacggcccgcacttctggcggat
gtgttcgaatccttcatcggcgcgctgtatctcgatcaagggctggagagagtccgtacc
ttcctgcagcagtatatgttcccgcatcttccccagcagggcaggctgctgacagccgat
tacaagacgcatctgcaggagcatacccagcagcacagcatggggcagctcgaatacaag
attgtcgatgagcgggggccggcccatgagcgcgagttcgtggcaagggtgttcctcggc
gagcagctgctcggcgaaggcacggggcgttccaagaaagaggcggaacagcacgcggca
gcggaagcgcttgccaagctgaaagtcaaagtggagcataagtaa
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